RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 ITGA6P23229 1130 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 DEFB115Q30KQ5 88 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 MICALL2Q8IY33 904 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 AGBL3Q8NEM8 1001 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
SSR3-205ENST00000467789 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
SSR3-205ENST00000467789 ANKRD18BA2A2Z9 1011 aa13.13□□□□□ -0.31
SSR3-205ENST00000467789 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
SSR3-205ENST00000467789 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
SSR3-205ENST00000467789 F6X3S4 739 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 GRM8O00222 908 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 PYGBP11216 843 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 MMP14P50281 582 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
SSR3-205ENST00000467789 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
SSR3-205ENST00000467789 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 GPR101Q96P66 508 aaPredicted RBP13.12□□□□□ -0.31
SSR3-205ENST00000467789 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
SSR3-205ENST00000467789 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 ABT1Q9ULW3 272 aaKnown RBP13.12□□□□□ -0.31
SSR3-205ENST00000467789 PTPRCP08575 1304 aa13.12□□□□□ -0.31
SSR3-205ENST00000467789 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
SSR3-205ENST00000467789 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
SSR3-205ENST00000467789 VEGFBP49765 207 aa13.11□□□□□ -0.31
SSR3-205ENST00000467789 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
SSR3-205ENST00000467789 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
SSR3-205ENST00000467789 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
SSR3-205ENST00000467789 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
SSR3-205ENST00000467789 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
SSR3-205ENST00000467789 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
SSR3-205ENST00000467789 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
SSR3-205ENST00000467789 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
SSR3-205ENST00000467789 ECE1P42892 770 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 FOXO4P98177 505 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 CST9Q5W186 159 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 SLC4A10Q6U841 1118 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 TLL2Q9Y6L7 1015 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 ZNF804BA4D1E1 1349 aa13.1□□□□□ -0.31
SSR3-205ENST00000467789 TRAF5O00463 557 aa13.09□□□□□ -0.31
SSR3-205ENST00000467789 ZNF280AP59817 542 aaPredicted RBP13.09□□□□□ -0.31
SSR3-205ENST00000467789 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
SSR3-205ENST00000467789 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
SSR3-205ENST00000467789 LMBR1LQ6UX01 489 aa13.09□□□□□ -0.31
SSR3-205ENST00000467789 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
SSR3-205ENST00000467789 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
SSR3-205ENST00000467789 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
SSR3-205ENST00000467789 DCPSQ96C86 337 aaKnown RBP13.09□□□□□ -0.31
SSR3-205ENST00000467789 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
SSR3-205ENST00000467789 GMLQ99445 158 aa13.09□□□□□ -0.31
SSR3-205ENST00000467789 GLIS2Q9BZE0 524 aaPredicted RBP13.09□□□□□ -0.31
SSR3-205ENST00000467789 UTYO14607 1347 aa13.09□□□□□ -0.31
SSR3-205ENST00000467789 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
SSR3-205ENST00000467789 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
SSR3-205ENST00000467789 USP17L8P0C7I0 530 aa13.08□□□□□ -0.32
SSR3-205ENST00000467789 KCNJ4P48050 445 aa13.08□□□□□ -0.32
SSR3-205ENST00000467789 MAP2K1Q02750 393 aaPredicted RBP13.08□□□□□ -0.32
SSR3-205ENST00000467789 CHRNDQ07001 517 aa13.08□□□□□ -0.32
SSR3-205ENST00000467789 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
SSR3-205ENST00000467789 C15orf52Q6ZUT6 534 aaKnown RBP13.08□□□□□ -0.32
SSR3-205ENST00000467789 TRMT2AQ8IZ69 625 aaKnown RBP13.08□□□□□ -0.32
SSR3-205ENST00000467789 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
SSR3-205ENST00000467789 WDR33Q9C0J8 1336 aaKnown RBP13.08□□□□□ -0.32
SSR3-205ENST00000467789 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
SSR3-205ENST00000467789 THSD7BQ9C0I4 1608 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 TAF7LQ5H9L4 462 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 KRT26Q7Z3Y9 468 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 SAPCD2Q86UD0 394 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 OGFOD1Q8N543 542 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 AIDAQ96BJ3 306 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 A0A1B0GUL6 1792 aa13.07□□□□□ -0.32
SSR3-205ENST00000467789 EGFRP00533 1210 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 MAP2K2P36507 400 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 EVX2Q03828 476 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.32
SSR3-205ENST00000467789 DACT2Q5SW24 774 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
SSR3-205ENST00000467789 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 SULF1Q8IWU6 871 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 MYOZ2Q9NPC6 264 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 WBP1LQ9NX94 342 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 PITPNM2Q9BZ72 1349 aa13.06□□□□□ -0.32
SSR3-205ENST00000467789 ZNF646O15015 1829 aaPredicted RBP13.06□□□□□ -0.32
SSR3-205ENST00000467789 WTIPA6NIX2 430 aaPredicted RBP13.05□□□□□ -0.32
SSR3-205ENST00000467789 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
SSR3-205ENST00000467789 TTLL5Q6EMB2 1281 aa13.05□□□□□ -0.32
SSR3-205ENST00000467789 ZNF804AQ7Z570 1209 aa13.05□□□□□ -0.32
SSR3-205ENST00000467789 USP48Q86UV5 1035 aa13.05□□□□□ -0.32
SSR3-205ENST00000467789 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
SSR3-205ENST00000467789 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms