RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 APOBRQ0VD83 1088 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 KLHL10Q6JEL2 608 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 LRSAM1Q6UWE0 723 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 CCDC112Q8NEF3 446 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 FAM227BQ96M60 508 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 DEF6Q9H4E7 631 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 TCP11L1Q9NUJ3 509 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 UVSSAQ2YD98 709 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 KANK3Q6NY19 840 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 CHST3Q7LGC8 479 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 LPIN2Q92539 896 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 SLC4A8Q2Y0W8 1093 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 MAP7D2Q96T17 732 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 ACBD3Q9H3P7 528 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 SNX14Q9Y5W7 946 aa15.92■□□□□ 0.14
BRAT1-203ENST00000467558 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 SLC27A2O14975 620 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 TXLNBQ8N3L3 684 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 CALM1P0DP23 149 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 CALM2P0DP24 149 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 CALM3P0DP25 149 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 PPP4R3BQ5MIZ7 849 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 CUL5Q93034 780 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 CPA1P15085 419 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 GSPT1P15170 499 aaKnown RBP15.91■□□□□ 0.14
BRAT1-203ENST00000467558 SYT1P21579 422 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 RPS6KB1P23443 525 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 UBA7P41226 1012 aa15.91■□□□□ 0.14
BRAT1-203ENST00000467558 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-203ENST00000467558 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
BRAT1-203ENST00000467558 ABCA6Q8N139 1617 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 MBD4O95243 580 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 LDHBP07195 334 aaKnown RBP15.9■□□□□ 0.14
BRAT1-203ENST00000467558 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 INO80Q9ULG1 1556 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-203ENST00000467558 PTPDC1A2A3K4 754 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 TNIP1Q15025 636 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 SYCP1Q15431 976 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 GIMAP6Q6P9H5 292 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 MCM9Q9NXL9 1143 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 TMEM132AQ24JP5 1023 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 ODF2Q5BJF6 829 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 CCDC129Q6ZRS4 1044 aa15.9■□□□□ 0.14
BRAT1-203ENST00000467558 CEP152O94986 1710 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 HSPA4P34932 840 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 SYKP43405 635 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 MRPS27Q92552 414 aaKnown RBP15.89■□□□□ 0.13
BRAT1-203ENST00000467558 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 BIN1O00499 593 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 CCDC148Q8NFR7 591 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 EAF2Q96CJ1 260 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-203ENST00000467558 MROH5Q6ZUA9 1318 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 TEX35Q5T0J7 233 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 PANK2Q9BZ23 570 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 CLIP2Q9UDT6 1046 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 RTL9Q8NET4 1388 aa15.89■□□□□ 0.13
BRAT1-203ENST00000467558 DACT1Q9NYF0 836 aa15.88■□□□□ 0.13
BRAT1-203ENST00000467558 PARP3Q9Y6F1 533 aa15.88■□□□□ 0.13
BRAT1-203ENST00000467558 HSP90B2PQ58FF3 399 aa15.88■□□□□ 0.13
BRAT1-203ENST00000467558 NOM1Q5C9Z4 860 aaKnown RBP15.88■□□□□ 0.13
BRAT1-203ENST00000467558 GPAA1O43292 621 aa15.88■□□□□ 0.13
BRAT1-203ENST00000467558 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
BRAT1-203ENST00000467558 HIBADHP31937 336 aaKnown RBP15.88■□□□□ 0.13
BRAT1-203ENST00000467558 RUFY1Q96T51 708 aa15.88■□□□□ 0.13
BRAT1-203ENST00000467558 DIP2CQ9Y2E4 1556 aa15.88■□□□□ 0.13
BRAT1-203ENST00000467558 F8W031 263 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-203ENST00000467558 TOP1P11387 765 aaKnown RBP15.87■□□□□ 0.13
BRAT1-203ENST00000467558 CALML4Q96GE6 196 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 TM6SF1Q9BZW5 370 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 COPRSQ9NQ92 184 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 USP21Q9UK80 565 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 PCCAP05165 728 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-203ENST00000467558 AMPD3Q01432 767 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 ZBTB38Q8NAP3 1195 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-203ENST00000467558 FBXO3Q9UK99 471 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 MED14O60244 1454 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 KIF2AO00139 706 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-203ENST00000467558 TMEM87BQ96K49 555 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 EYA3Q99504 573 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 FEZ1Q99689 392 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
BRAT1-203ENST00000467558 CPSF1Q10570 1443 aaKnown RBP15.87■□□□□ 0.13
BRAT1-203ENST00000467558 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
BRAT1-203ENST00000467558 MYO1BO43795 1136 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 KIF20AO95235 890 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 ADCY5O95622 1261 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 BRAPQ7Z569 592 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 FAM177A1Q8N128 213 aaPredicted RBP15.86■□□□□ 0.13
BRAT1-203ENST00000467558 OGFOD1Q8N543 542 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 NEMFO60524 1076 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
BRAT1-203ENST00000467558 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 SPTLC2O15270 562 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 FGFR1OPO95684 399 aaKnown RBP15.86■□□□□ 0.13
BRAT1-203ENST00000467558 OSBPL3Q9H4L5 887 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 EHMT1Q9H9B1 1298 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 SSH2Q76I76 1423 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 CALML3P27482 149 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms