RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 NFE2L2Q16236 605 aa12.08□□□□□ -0.48
ABCF3-205ENST00000466416 SLC9C1Q4G0N8 1177 aa12.08□□□□□ -0.48
ABCF3-205ENST00000466416 PLBD2Q8NHP8 589 aa12.08□□□□□ -0.48
ABCF3-205ENST00000466416 WNK4Q96J92 1243 aa12.08□□□□□ -0.48
ABCF3-205ENST00000466416 RBM27Q9P2N5 1060 aaKnown RBP12.08□□□□□ -0.48
ABCF3-205ENST00000466416 CUL9Q8IWT3 2517 aa12.07□□□□□ -0.48
ABCF3-205ENST00000466416 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-205ENST00000466416 ATP2B4P23634 1241 aa12.07□□□□□ -0.48
ABCF3-205ENST00000466416 PPP2R1AP30153 589 aa12.07□□□□□ -0.48
ABCF3-205ENST00000466416 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-205ENST00000466416 TRIM28Q13263 835 aaKnown RBP12.07□□□□□ -0.48
ABCF3-205ENST00000466416 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
ABCF3-205ENST00000466416 XDHP47989 1333 aa12.07□□□□□ -0.48
ABCF3-205ENST00000466416 TESPA1A2RU30 521 aaPredicted RBP12.06□□□□□ -0.48
ABCF3-205ENST00000466416 DACT2Q5SW24 774 aa12.06□□□□□ -0.48
ABCF3-205ENST00000466416 STRIP1Q5VSL9 837 aa12.06□□□□□ -0.48
ABCF3-205ENST00000466416 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
ABCF3-205ENST00000466416 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
ABCF3-205ENST00000466416 PNNQ9H307 717 aaKnown RBP12.06□□□□□ -0.48
ABCF3-205ENST00000466416 SEC31BQ9NQW1 1179 aa12.06□□□□□ -0.48
ABCF3-205ENST00000466416 CENPFP49454 3210 aa12.05□□□□□ -0.48
ABCF3-205ENST00000466416 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
ABCF3-205ENST00000466416 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
ABCF3-205ENST00000466416 RTL5Q5HYW3 569 aaPredicted RBP12.05□□□□□ -0.48
ABCF3-205ENST00000466416 DPF3Q92784 378 aa12.05□□□□□ -0.48
ABCF3-205ENST00000466416 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
ABCF3-205ENST00000466416 PTCH2Q9Y6C5 1203 aa12.05□□□□□ -0.48
ABCF3-205ENST00000466416 SASH1O94885 1247 aa12.04□□□□□ -0.48
ABCF3-205ENST00000466416 TRIM26Q12899 539 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-205ENST00000466416 SUPT20HL1Q3ZLR7 823 aa12.04□□□□□ -0.48
ABCF3-205ENST00000466416 ZBTB38Q8NAP3 1195 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-205ENST00000466416 ZBED3Q96IU2 234 aaPredicted RBP12.04□□□□□ -0.48
ABCF3-205ENST00000466416 CLMNQ96JQ2 1002 aa12.04□□□□□ -0.48
ABCF3-205ENST00000466416 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
ABCF3-205ENST00000466416 PSME4Q14997 1843 aa12.04□□□□□ -0.48
ABCF3-205ENST00000466416 A0A0C4DFX4 3053 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
ABCF3-205ENST00000466416 BRCA2P51587 3418 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 A0A1W2PPC1 479 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
ABCF3-205ENST00000466416 CAP1Q01518 475 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 PTPN18Q99952 460 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 MXD3Q9BW11 206 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 COA1Q9GZY4 146 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 PRO3102Q9H379 93 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
ABCF3-205ENST00000466416 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
ABCF3-205ENST00000466416 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 ZFYVE28Q9HCC9 887 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 NR2E3Q9Y5X4 410 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 COL4A1P02462 1669 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 MAPK8IP3Q9UPT6 1336 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
ABCF3-205ENST00000466416 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
ABCF3-205ENST00000466416 PDE8AO60658 829 aa12.01□□□□□ -0.49
ABCF3-205ENST00000466416 GNRH1P01148 92 aa12.01□□□□□ -0.49
ABCF3-205ENST00000466416 GJA5P36382 358 aa12.01□□□□□ -0.49
ABCF3-205ENST00000466416 TTLL5Q6EMB2 1281 aa12.01□□□□□ -0.49
ABCF3-205ENST00000466416 ANKRD13AQ8IZ07 590 aa12.01□□□□□ -0.49
ABCF3-205ENST00000466416 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
ABCF3-205ENST00000466416 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
ABCF3-205ENST00000466416 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
ABCF3-205ENST00000466416 USP2O75604 605 aaPredicted RBP12□□□□□ -0.49
ABCF3-205ENST00000466416 WDHD1O75717 1129 aaPredicted RBP12□□□□□ -0.49
ABCF3-205ENST00000466416 MYCP01106 439 aaPredicted RBP12□□□□□ -0.49
ABCF3-205ENST00000466416 PRMT2P55345 433 aa12□□□□□ -0.49
ABCF3-205ENST00000466416 KIF22Q14807 665 aa12□□□□□ -0.49
ABCF3-205ENST00000466416 DLGAP5Q15398 846 aa12□□□□□ -0.49
ABCF3-205ENST00000466416 KIAA0825Q8IV33 1275 aa12□□□□□ -0.49
ABCF3-205ENST00000466416 MTMR14Q8NCE2 650 aa12□□□□□ -0.49
ABCF3-205ENST00000466416 CDC5LQ99459 802 aaKnown RBP12□□□□□ -0.49
ABCF3-205ENST00000466416 HYPKQ9NX55 129 aa12□□□□□ -0.49
ABCF3-205ENST00000466416 PCCAP05165 728 aaPredicted RBP11.99□□□□□ -0.49
ABCF3-205ENST00000466416 HOXB7P09629 217 aa11.99□□□□□ -0.49
ABCF3-205ENST00000466416 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
ABCF3-205ENST00000466416 RIPK4P57078 832 aa11.99□□□□□ -0.49
ABCF3-205ENST00000466416 TAF1CQ15572 869 aaPredicted RBP11.99□□□□□ -0.49
ABCF3-205ENST00000466416 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
ABCF3-205ENST00000466416 SH3TC2Q8TF17 1288 aa11.99□□□□□ -0.49
ABCF3-205ENST00000466416 MS4A4AQ96JQ5 239 aa11.99□□□□□ -0.49
ABCF3-205ENST00000466416 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
ABCF3-205ENST00000466416 BSDC1Q9NW68 430 aaPredicted RBP11.99□□□□□ -0.49
ABCF3-205ENST00000466416 MINPP1Q9UNW1 487 aa11.99□□□□□ -0.49
ABCF3-205ENST00000466416 RANBP2P49792 3224 aaKnown RBP11.99□□□□□ -0.49
ABCF3-205ENST00000466416 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
ABCF3-205ENST00000466416 MYO1BO43795 1136 aa11.98□□□□□ -0.49
ABCF3-205ENST00000466416 GTF2A2P52657 109 aa11.98□□□□□ -0.49
ABCF3-205ENST00000466416 LMOD3Q0VAK6 560 aa11.98□□□□□ -0.49
ABCF3-205ENST00000466416 RIC3Q7Z5B4 369 aa11.98□□□□□ -0.49
ABCF3-205ENST00000466416 CCDC191Q8NCU4 936 aa11.98□□□□□ -0.49
ABCF3-205ENST00000466416 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
ABCF3-205ENST00000466416 CHL1O00533 1208 aa11.97□□□□□ -0.49
ABCF3-205ENST00000466416 ZBTB7BO15156 539 aaPredicted RBP11.97□□□□□ -0.49
ABCF3-205ENST00000466416 GTF2IP78347 998 aa11.97□□□□□ -0.49
ABCF3-205ENST00000466416 NBPF12Q5TAG4 269 aaPredicted RBP11.97□□□□□ -0.49
ABCF3-205ENST00000466416 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
ABCF3-205ENST00000466416 UBE2Q1Q7Z7E8 422 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms