RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 MXD3Q9BW11 206 aa17.17■□□□□ 0.34
MRPL55-224ENST00000464148 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
MRPL55-224ENST00000464148 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
MRPL55-224ENST00000464148 WTIPA6NIX2 430 aaPredicted RBP17.16■□□□□ 0.34
MRPL55-224ENST00000464148 WNT10BO00744 389 aa17.16■□□□□ 0.34
MRPL55-224ENST00000464148 FKTNO75072 461 aa17.16■□□□□ 0.34
MRPL55-224ENST00000464148 PRKG1Q13976 671 aa17.16■□□□□ 0.34
MRPL55-224ENST00000464148 NOM1Q5C9Z4 860 aaKnown RBP17.16■□□□□ 0.34
MRPL55-224ENST00000464148 DACT2Q5SW24 774 aa17.16■□□□□ 0.34
MRPL55-224ENST00000464148 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
MRPL55-224ENST00000464148 MYO3BQ8WXR4 1341 aa17.16■□□□□ 0.34
MRPL55-224ENST00000464148 SASH1O94885 1247 aa17.15■□□□□ 0.34
MRPL55-224ENST00000464148 CTSWP56202 376 aa17.15■□□□□ 0.34
MRPL55-224ENST00000464148 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
MRPL55-224ENST00000464148 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
MRPL55-224ENST00000464148 SPEF2Q9C093 1822 aa17.14■□□□□ 0.34
MRPL55-224ENST00000464148 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.33
MRPL55-224ENST00000464148 PTPN12Q05209 780 aaKnown RBP17.14■□□□□ 0.33
MRPL55-224ENST00000464148 STRIP1Q5VSL9 837 aa17.14■□□□□ 0.33
MRPL55-224ENST00000464148 BSDC1Q9NW68 430 aaPredicted RBP17.14■□□□□ 0.33
MRPL55-224ENST00000464148 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
MRPL55-224ENST00000464148 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
MRPL55-224ENST00000464148 GNAI1P63096 354 aa17.13■□□□□ 0.33
MRPL55-224ENST00000464148 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
MRPL55-224ENST00000464148 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
MRPL55-224ENST00000464148 GREM2Q9H772 168 aa17.13■□□□□ 0.33
MRPL55-224ENST00000464148 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-224ENST00000464148 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
MRPL55-224ENST00000464148 MMP14P50281 582 aa17.12■□□□□ 0.33
MRPL55-224ENST00000464148 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
MRPL55-224ENST00000464148 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
MRPL55-224ENST00000464148 CFHR5Q9BXR6 569 aa17.12■□□□□ 0.33
MRPL55-224ENST00000464148 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
MRPL55-224ENST00000464148 ANGEL1Q9UNK9 670 aaKnown RBP17.12■□□□□ 0.33
MRPL55-224ENST00000464148 ALDH1A1P00352 501 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 CCDC30Q5VVM6 783 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 SPRYD7Q5W111 196 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 TTLL5Q6EMB2 1281 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 KIAA0825Q8IV33 1275 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 GCC1Q96CN9 775 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 R3HDMLQ9H3Y0 253 aa17.11■□□□□ 0.33
MRPL55-224ENST00000464148 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-224ENST00000464148 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
MRPL55-224ENST00000464148 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
MRPL55-224ENST00000464148 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
MRPL55-224ENST00000464148 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
MRPL55-224ENST00000464148 LEMD3Q9Y2U8 911 aa17.1■□□□□ 0.33
MRPL55-224ENST00000464148 MYH3P11055 1940 aa17.09■□□□□ 0.33
MRPL55-224ENST00000464148 LDLRAD1Q5T700 205 aa17.09■□□□□ 0.33
MRPL55-224ENST00000464148 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
MRPL55-224ENST00000464148 TRIM17Q9Y577 477 aa17.09■□□□□ 0.33
MRPL55-224ENST00000464148 ZNF804BA4D1E1 1349 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 PI4KAP2A4QPH2 592 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 MANSC4A6NHS7 340 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-224ENST00000464148 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 INHBEP58166 350 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 GTF2IP78347 998 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 KSR2Q6VAB6 950 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 PI4KAP1Q8N8J0 262 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 ANKRD2Q9GZV1 360 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 FZD1Q9UP38 647 aa17.08■□□□□ 0.32
MRPL55-224ENST00000464148 APAF1O14727 1248 aa17.07■□□□□ 0.32
MRPL55-224ENST00000464148 KCNJ4P48050 445 aa17.07■□□□□ 0.32
MRPL55-224ENST00000464148 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
MRPL55-224ENST00000464148 DLGAP5Q15398 846 aa17.07■□□□□ 0.32
MRPL55-224ENST00000464148 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
MRPL55-224ENST00000464148 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
MRPL55-224ENST00000464148 MPHOSPH8Q99549 860 aa17.07■□□□□ 0.32
MRPL55-224ENST00000464148 DEFB129Q9H1M3 183 aa17.07■□□□□ 0.32
MRPL55-224ENST00000464148 COL1A1P02452 1464 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-224ENST00000464148 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-224ENST00000464148 KLRK1P26718 216 aa17.06■□□□□ 0.32
MRPL55-224ENST00000464148 INTS3Q68E01 1043 aaKnown RBP17.06■□□□□ 0.32
MRPL55-224ENST00000464148 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
MRPL55-224ENST00000464148 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
MRPL55-224ENST00000464148 HTTP42858 3142 aa17.05■□□□□ 0.32
MRPL55-224ENST00000464148 ZBTB48P10074 688 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-224ENST00000464148 OTOP1Q7RTM1 612 aa17.05■□□□□ 0.32
MRPL55-224ENST00000464148 ZBED3Q96IU2 234 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-224ENST00000464148 POTEFA5A3E0 1075 aa17.04■□□□□ 0.32
MRPL55-224ENST00000464148 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
MRPL55-224ENST00000464148 ITGA6P23229 1130 aa17.04■□□□□ 0.32
MRPL55-224ENST00000464148 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
MRPL55-224ENST00000464148 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
MRPL55-224ENST00000464148 CLMNQ96JQ2 1002 aa17.04■□□□□ 0.32
MRPL55-224ENST00000464148 H7C1W4 665 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
MRPL55-224ENST00000464148 MYO1BO43795 1136 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 MAP3K11Q16584 847 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 HABP4Q5JVS0 413 aaKnown RBP17.03■□□□□ 0.32
MRPL55-224ENST00000464148 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 PPP2R3BQ9Y5P8 575 aa17.03■□□□□ 0.32
MRPL55-224ENST00000464148 CENPFP49454 3210 aa17.02■□□□□ 0.32
MRPL55-224ENST00000464148 F8W031 263 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-224ENST00000464148 CHRNDQ07001 517 aa17.02■□□□□ 0.32
MRPL55-224ENST00000464148 PTPN22Q9Y2R2 807 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms