RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SASH1O94885 1247 aa23.5■■□□□ 1.35
LMNB1-204ENST00000463908 G3BP1Q13283 466 aaKnown RBP eCLIP23.5■■□□□ 1.352e-7■■■□□ 14.7
LMNB1-204ENST00000463908 ZNF541Q9H0D2 1346 aa23.5■■□□□ 1.35
LMNB1-204ENST00000463908 IRX6P78412 446 aaPredicted RBP23.49■■□□□ 1.35
LMNB1-204ENST00000463908 CXCL9Q07325 125 aa23.49■■□□□ 1.35
LMNB1-204ENST00000463908 TFCP2Q12800 502 aa23.49■■□□□ 1.35
LMNB1-204ENST00000463908 GLTPD2A6NH11 291 aa23.48■■□□□ 1.35
LMNB1-204ENST00000463908 ECE2O60344 883 aa23.48■■□□□ 1.35
LMNB1-204ENST00000463908 HSPA6P17066 643 aa23.48■■□□□ 1.35
LMNB1-204ENST00000463908 DDNO94850 711 aaPredicted RBP23.47■■□□□ 1.35
LMNB1-204ENST00000463908 PUM3Q15397 648 aaKnown RBP23.47■■□□□ 1.35
LMNB1-204ENST00000463908 FAM84BQ96KN1 310 aaPredicted RBP23.47■■□□□ 1.35
LMNB1-204ENST00000463908 EIF6P56537 245 aaKnown RBP23.46■■□□□ 1.35
LMNB1-204ENST00000463908 DPY19L2Q6NUT2 758 aa23.46■■□□□ 1.35
LMNB1-204ENST00000463908 TIAM2Q8IVF5 1701 aa23.46■■□□□ 1.35
LMNB1-204ENST00000463908 COA1Q9GZY4 146 aa23.46■■□□□ 1.35
LMNB1-204ENST00000463908 EXOC6BQ9Y2D4 811 aa23.46■■□□□ 1.35
LMNB1-204ENST00000463908 HMMRO75330 724 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 RAD17O75943 681 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 GYG1P46976 350 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 TIMM10P62072 90 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 PODNQ7Z5L7 613 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 FBXO33Q7Z6M2 555 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 LPIN2Q92539 896 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 CD209Q9NNX6 404 aa23.45■■□□□ 1.34
LMNB1-204ENST00000463908 G3V3G9 751 aa23.44■■□□□ 1.34
LMNB1-204ENST00000463908 DCAF8Q5TAQ9 597 aa23.44■■□□□ 1.34
LMNB1-204ENST00000463908 POTECB2RU33 542 aa23.43■■□□□ 1.34
LMNB1-204ENST00000463908 ATP2B3Q16720 1220 aa23.43■■□□□ 1.34
LMNB1-204ENST00000463908 CIAPIN1Q6FI81 312 aa23.43■■□□□ 1.34
LMNB1-204ENST00000463908 IFIT1P09914 478 aaKnown RBP23.42■■□□□ 1.34
LMNB1-204ENST00000463908 IL1R1P14778 569 aa23.42■■□□□ 1.34
LMNB1-204ENST00000463908 HIBADHP31937 336 aaKnown RBP23.42■■□□□ 1.34
LMNB1-204ENST00000463908 BCAMP50895 628 aa23.42■■□□□ 1.34
LMNB1-204ENST00000463908 OS9Q13438 667 aaPredicted RBP23.42■■□□□ 1.34
LMNB1-204ENST00000463908 AAMPQ13685 434 aa23.42■■□□□ 1.34
LMNB1-204ENST00000463908 GPC2Q8N158 579 aa23.42■■□□□ 1.34
LMNB1-204ENST00000463908 GJA3Q9Y6H8 435 aa23.42■■□□□ 1.34
LMNB1-204ENST00000463908 PSMD14O00487 310 aa23.41■■□□□ 1.34
LMNB1-204ENST00000463908 SLC5A1P13866 664 aa23.41■■□□□ 1.34
LMNB1-204ENST00000463908 ADORA1P30542 326 aa23.41■■□□□ 1.34
LMNB1-204ENST00000463908 ZNF804AQ7Z570 1209 aa23.41■■□□□ 1.34
LMNB1-204ENST00000463908 KDM2BQ8NHM5 1336 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 A0A1B0GUL7 405 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 KIF3CO14782 793 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 TNIP1Q15025 636 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 TDRD7Q8NHU6 1098 aaKnown RBP23.4■■□□□ 1.34
LMNB1-204ENST00000463908 DCTPP1Q9H773 170 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 RRAGCQ9HB90 399 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 NMRK2Q9NPI5 230 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 AKAP2Q9Y2D5 859 aa23.4■■□□□ 1.34
LMNB1-204ENST00000463908 VIL1P09327 827 aaKnown RBP23.39■■□□□ 1.33
LMNB1-204ENST00000463908 HSP90AB4PQ58FF6 505 aa23.39■■□□□ 1.33
LMNB1-204ENST00000463908 L3MBTL3Q96JM7 780 aaPredicted RBP23.39■■□□□ 1.33
LMNB1-204ENST00000463908 GPR108Q9NPR9 543 aa23.39■■□□□ 1.33
LMNB1-204ENST00000463908 ZBTB12Q9Y330 459 aaPredicted RBP23.39■■□□□ 1.33
LMNB1-204ENST00000463908 SCN9AQ15858 1988 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 USP17L3A6NCW0 530 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 USP17L4A6NCW7 530 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 CAVIN4Q5BKX8 364 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 USP17L1Q7RTZ2 530 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 RHPN1Q8TCX5 695 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 XAGE2Q96GT9 111 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 NEUROD6Q96NK8 337 aa23.38■■□□□ 1.33
LMNB1-204ENST00000463908 WDR90Q96KV7 1748 aa23.37■■□□□ 1.33
LMNB1-204ENST00000463908 GTF2IP78347 998 aa23.37■■□□□ 1.33
LMNB1-204ENST00000463908 TNNI3KQ59H18 835 aa23.37■■□□□ 1.33
LMNB1-204ENST00000463908 DACT2Q5SW24 774 aa23.37■■□□□ 1.33
LMNB1-204ENST00000463908 TTLL5Q6EMB2 1281 aa23.37■■□□□ 1.33
LMNB1-204ENST00000463908 EAF2Q96CJ1 260 aaPredicted RBP23.37■■□□□ 1.33
LMNB1-204ENST00000463908 MXD3Q9BW11 206 aa23.37■■□□□ 1.33
LMNB1-204ENST00000463908 FPGT-TNNI3KV9GXZ4 949 aa23.37■■□□□ 1.33
LMNB1-204ENST00000463908 APBB1O00213 710 aa23.36■■□□□ 1.33
LMNB1-204ENST00000463908 RAB11FIP3O75154 756 aa23.36■■□□□ 1.33
LMNB1-204ENST00000463908 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
LMNB1-204ENST00000463908 GMPSP49915 693 aaPredicted RBP23.36■■□□□ 1.33
LMNB1-204ENST00000463908 SCNN1DP51172 638 aa23.36■■□□□ 1.33
LMNB1-204ENST00000463908 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
LMNB1-204ENST00000463908 ERC1Q8IUD2 1116 aa23.36■■□□□ 1.33
LMNB1-204ENST00000463908 IQSEC3Q9UPP2 1182 aaPredicted RBP23.36■■□□□ 1.33
LMNB1-204ENST00000463908 PHKA1P46020 1223 aa23.35■■□□□ 1.33
LMNB1-204ENST00000463908 VPS37DQ86XT2 251 aa23.35■■□□□ 1.33
LMNB1-204ENST00000463908 GMLQ99445 158 aa23.35■■□□□ 1.33
LMNB1-204ENST00000463908 IL1RAPL2Q9NP60 686 aa23.35■■□□□ 1.33
LMNB1-204ENST00000463908 ZNF609O15014 1411 aa23.34■■□□□ 1.33
LMNB1-204ENST00000463908 HDAC1Q13547 482 aaPredicted RBP23.34■■□□□ 1.33
LMNB1-204ENST00000463908 CCDC102BQ68D86 513 aa23.34■■□□□ 1.33
LMNB1-204ENST00000463908 RSBN1LQ6PCB5 846 aaPredicted RBP23.34■■□□□ 1.33
LMNB1-204ENST00000463908 KIF1BPQ96EK5 621 aa23.34■■□□□ 1.33
LMNB1-204ENST00000463908 JAG2Q9Y219 1238 aa23.34■■□□□ 1.33
LMNB1-204ENST00000463908 VEGFAP15692 232 aaPredicted RBP23.33■■□□□ 1.33
LMNB1-204ENST00000463908 EPS15P42566 896 aa23.33■■□□□ 1.33
LMNB1-204ENST00000463908 DPF2Q92785 391 aa23.33■■□□□ 1.33
LMNB1-204ENST00000463908 DBNDD2Q9BQY9 259 aa23.33■■□□□ 1.33
LMNB1-204ENST00000463908 CCDC8Q9H0W5 538 aaPredicted RBP23.33■■□□□ 1.33
LMNB1-204ENST00000463908 FAM205AQ6ZU69 1335 aa23.33■■□□□ 1.32
LMNB1-204ENST00000463908 SHTN1A0MZ66 631 aa23.32■■□□□ 1.32
LMNB1-204ENST00000463908 IGHDP01880 384 aa23.32■■□□□ 1.32
LMNB1-204ENST00000463908 CERS5Q8N5B7 392 aa23.32■■□□□ 1.32
LMNB1-204ENST00000463908 FBXW7Q969H0 707 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms