RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 UBE4AQ14139 1066 aa25.08■■□□□ 1.61
NUP43-205ENST00000463048 PUM3Q15397 648 aaKnown RBP25.08■■□□□ 1.61
NUP43-205ENST00000463048 KCNQ5Q9NR82 932 aa25.08■■□□□ 1.61
NUP43-205ENST00000463048 ZNRF3Q9ULT6 936 aa25.08■■□□□ 1.61
NUP43-205ENST00000463048 GJA3Q9Y6H8 435 aa25.08■■□□□ 1.61
NUP43-205ENST00000463048 YDJCA8MPS7 323 aa25.07■■□□□ 1.6
NUP43-205ENST00000463048 SASH1O94885 1247 aa25.07■■□□□ 1.6
NUP43-205ENST00000463048 GYG1P46976 350 aa25.07■■□□□ 1.6
NUP43-205ENST00000463048 EIF6P56537 245 aaKnown RBP25.07■■□□□ 1.6
NUP43-205ENST00000463048 ATP2B3Q16720 1220 aa25.07■■□□□ 1.6
NUP43-205ENST00000463048 FBXW7Q969H0 707 aa25.06■■□□□ 1.6
NUP43-205ENST00000463048 FZD9O00144 591 aa25.05■■□□□ 1.6
NUP43-205ENST00000463048 DDNO94850 711 aaPredicted RBP25.05■■□□□ 1.6
NUP43-205ENST00000463048 SLC5A1P13866 664 aa25.05■■□□□ 1.6
NUP43-205ENST00000463048 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
NUP43-205ENST00000463048 IFIT1P09914 478 aaKnown RBP25.04■■□□□ 1.6
NUP43-205ENST00000463048 TIMM10P62072 90 aa25.04■■□□□ 1.6
NUP43-205ENST00000463048 NEUROD6Q96NK8 337 aa25.04■■□□□ 1.6
NUP43-205ENST00000463048 IRS2Q9Y4H2 1338 aa25.04■■□□□ 1.6
NUP43-205ENST00000463048 FGFR2P21802 821 aa25.03■■□□□ 1.6
NUP43-205ENST00000463048 ADORA1P30542 326 aa25.03■■□□□ 1.6
NUP43-205ENST00000463048 CXCL9Q07325 125 aa25.03■■□□□ 1.6
NUP43-205ENST00000463048 DPY19L2Q6NUT2 758 aa25.03■■□□□ 1.6
NUP43-205ENST00000463048 ZNF804AQ7Z570 1209 aa25.03■■□□□ 1.6
NUP43-205ENST00000463048 LPIN2Q92539 896 aa25.03■■□□□ 1.6
NUP43-205ENST00000463048 IQSEC3Q9UPP2 1182 aaPredicted RBP25.03■■□□□ 1.6
NUP43-205ENST00000463048 BCAMP50895 628 aa25.02■■□□□ 1.6
NUP43-205ENST00000463048 VPS37DQ86XT2 251 aa25.02■■□□□ 1.6
NUP43-205ENST00000463048 COA1Q9GZY4 146 aa25.02■■□□□ 1.6
NUP43-205ENST00000463048 JAG2Q9Y219 1238 aa25.02■■□□□ 1.6
NUP43-205ENST00000463048 A0A1B0GUL7 405 aa25.01■■□□□ 1.59
NUP43-205ENST00000463048 HIBADHP31937 336 aaKnown RBP25.01■■□□□ 1.59
NUP43-205ENST00000463048 CIAPIN1Q6FI81 312 aa25.01■■□□□ 1.59
NUP43-205ENST00000463048 C15orf52Q6ZUT6 534 aaKnown RBP25.01■■□□□ 1.59
NUP43-205ENST00000463048 FAM84BQ96KN1 310 aaPredicted RBP25.01■■□□□ 1.59
NUP43-205ENST00000463048 CD209Q9NNX6 404 aa25.01■■□□□ 1.59
NUP43-205ENST00000463048 IL1RAPL2Q9NP60 686 aa25.01■■□□□ 1.59
NUP43-205ENST00000463048 AKAP2Q9Y2D5 859 aa25.01■■□□□ 1.59
NUP43-205ENST00000463048 ZC3H4Q9UPT8 1303 aaKnown RBP25.01■■□□□ 1.59
NUP43-205ENST00000463048 GLTPD2A6NH11 291 aa25■■□□□ 1.59
NUP43-205ENST00000463048 CAVIN4Q5BKX8 364 aa25■■□□□ 1.59
NUP43-205ENST00000463048 SCN9AQ15858 1988 aa25■■□□□ 1.59
NUP43-205ENST00000463048 PSMD14O00487 310 aa24.99■■□□□ 1.59
NUP43-205ENST00000463048 HSP90AB4PQ58FF6 505 aa24.99■■□□□ 1.59
NUP43-205ENST00000463048 ERC1Q8IUD2 1116 aa24.99■■□□□ 1.59
NUP43-205ENST00000463048 ZNF609O15014 1411 aa24.98■■□□□ 1.59
NUP43-205ENST00000463048 KDM2BQ8NHM5 1336 aa24.98■■□□□ 1.59
NUP43-205ENST00000463048 TNNI3KQ59H18 835 aa24.98■■□□□ 1.59
NUP43-205ENST00000463048 PODNQ7Z5L7 613 aa24.98■■□□□ 1.59
NUP43-205ENST00000463048 RHPN1Q8TCX5 695 aa24.98■■□□□ 1.59
NUP43-205ENST00000463048 MXD3Q9BW11 206 aa24.98■■□□□ 1.59
NUP43-205ENST00000463048 ZBTB12Q9Y330 459 aaPredicted RBP24.98■■□□□ 1.59
NUP43-205ENST00000463048 FPGT-TNNI3KV9GXZ4 949 aa24.98■■□□□ 1.59
NUP43-205ENST00000463048 FRAT2O75474 233 aaPredicted RBP24.97■■□□□ 1.59
NUP43-205ENST00000463048 GTF2IP78347 998 aa24.97■■□□□ 1.59
NUP43-205ENST00000463048 TNIP1Q15025 636 aa24.97■■□□□ 1.59
NUP43-205ENST00000463048 GORABQ5T7V8 394 aa24.97■■□□□ 1.59
NUP43-205ENST00000463048 FBXO33Q7Z6M2 555 aa24.97■■□□□ 1.59
NUP43-205ENST00000463048 ZNF784Q8NCA9 323 aaPredicted RBP24.97■■□□□ 1.59
NUP43-205ENST00000463048 XAGE2Q96GT9 111 aa24.97■■□□□ 1.59
NUP43-205ENST00000463048 CCDC8Q9H0W5 538 aaPredicted RBP24.97■■□□□ 1.59
NUP43-205ENST00000463048 RRAGCQ9HB90 399 aa24.97■■□□□ 1.59
NUP43-205ENST00000463048 NMRK2Q9NPI5 230 aa24.97■■□□□ 1.59
NUP43-205ENST00000463048 SMARCA5O60264 1052 aaPredicted RBP24.96■■□□□ 1.59
NUP43-205ENST00000463048 CHAF1AQ13111 956 aaPredicted RBP24.96■■□□□ 1.59
NUP43-205ENST00000463048 AAMPQ13685 434 aa24.96■■□□□ 1.59
NUP43-205ENST00000463048 GPC2Q8N158 579 aa24.96■■□□□ 1.59
NUP43-205ENST00000463048 GPBP1L1Q9HC44 474 aaPredicted RBP24.96■■□□□ 1.59
NUP43-205ENST00000463048 USP17L3A6NCW0 530 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 USP17L4A6NCW7 530 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 RAB11FIP3O75154 756 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 PHKA1P46020 1223 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 GMPSP49915 693 aaPredicted RBP24.95■■□□□ 1.58
NUP43-205ENST00000463048 USP17L1Q7RTZ2 530 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 KIF1BPQ96EK5 621 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 DCTPP1Q9H773 170 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 ARAP2Q8WZ64 1704 aa24.95■■□□□ 1.58
NUP43-205ENST00000463048 NEFLP07196 543 aa24.94■■□□□ 1.58
NUP43-205ENST00000463048 IL1R1P14778 569 aa24.94■■□□□ 1.58
NUP43-205ENST00000463048 TTLL5Q6EMB2 1281 aa24.94■■□□□ 1.58
NUP43-205ENST00000463048 AACSQ86V21 672 aa24.94■■□□□ 1.58
NUP43-205ENST00000463048 EAF2Q96CJ1 260 aaPredicted RBP24.94■■□□□ 1.58
NUP43-205ENST00000463048 DBNDD2Q9BQY9 259 aa24.94■■□□□ 1.58
NUP43-205ENST00000463048 TLR7Q9NYK1 1049 aaKnown RBP24.94■■□□□ 1.58
NUP43-205ENST00000463048 TDRD7Q8NHU6 1098 aaKnown RBP24.93■■□□□ 1.58
NUP43-205ENST00000463048 IGHDP01880 384 aa24.92■■□□□ 1.58
NUP43-205ENST00000463048 CCDC102BQ68D86 513 aa24.92■■□□□ 1.58
NUP43-205ENST00000463048 LRRCC1Q9C099 1032 aa24.92■■□□□ 1.58
NUP43-205ENST00000463048 RWDD1Q9H446 243 aaPredicted RBP24.92■■□□□ 1.58
NUP43-205ENST00000463048 GPR108Q9NPR9 543 aa24.92■■□□□ 1.58
NUP43-205ENST00000463048 SHTN1A0MZ66 631 aa24.91■■□□□ 1.58
NUP43-205ENST00000463048 HDAC1Q13547 482 aaPredicted RBP24.91■■□□□ 1.58
NUP43-205ENST00000463048 DACT2Q5SW24 774 aa24.91■■□□□ 1.58
NUP43-205ENST00000463048 VIL1P09327 827 aaKnown RBP24.9■■□□□ 1.58
NUP43-205ENST00000463048 RSBN1LQ6PCB5 846 aaPredicted RBP24.9■■□□□ 1.58
NUP43-205ENST00000463048 CLASRPQ8N2M8 674 aaKnown RBP24.9■■□□□ 1.58
NUP43-205ENST00000463048 GNL3LQ9NVN8 582 aaKnown RBP24.9■■□□□ 1.58
NUP43-205ENST00000463048 DBNLQ9UJU6 430 aaKnown RBP24.9■■□□□ 1.58
NUP43-205ENST00000463048 PSME4Q14997 1843 aa24.9■■□□□ 1.58
NUP43-205ENST00000463048 LMOD1P29536 600 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms