RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 METTL24Q5JXM2 366 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 TM6SF1Q9BZW5 370 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 CNNM1Q9NRU3 951 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 LIMCH1Q9UPQ0 1083 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 AKAP2Q9Y2D5 859 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 ABCC12Q96J65 1359 aa14.83□□□□□ -0.04
COL4A6-204ENST00000461897 CCDC152Q4G0S7 254 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 FOXD4L5Q5VV16 416 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 USP48Q86UV5 1035 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 FOXD4L4Q8WXT5 416 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 FAM227BQ96M60 508 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 DNAJC2Q99543 621 aaKnown RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 ARAP2Q8WZ64 1704 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 RFX7Q2KHR2 1363 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 HIP1O00291 1037 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 ZSCAN22P10073 491 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 HSP90B1P14625 803 aaKnown RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 NMIQ13287 307 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 HSP90AA2PQ14568 343 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-204ENST00000461897 C3orf67Q6ZVT6 689 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 RASEFQ8IZ41 740 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 RUFY2Q8WXA3 655 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 XAGE2Q96GT9 111 aa14.82□□□□□ -0.04
COL4A6-204ENST00000461897 A0A0D9SFI3 127 aa14.81□□□□□ -0.04
COL4A6-204ENST00000461897 LETM1O95202 739 aaPredicted RBP14.81□□□□□ -0.04
COL4A6-204ENST00000461897 AK2P54819 239 aa14.81□□□□□ -0.04
COL4A6-204ENST00000461897 ATP2B3Q16720 1220 aa14.81□□□□□ -0.04
COL4A6-204ENST00000461897 CSPP1Q1MSJ5 1256 aa14.81□□□□□ -0.04
COL4A6-204ENST00000461897 SLC27A3Q5K4L6 730 aa14.81□□□□□ -0.04
COL4A6-204ENST00000461897 RUFY3Q7L099 469 aa14.81□□□□□ -0.04
COL4A6-204ENST00000461897 GADD45BO75293 160 aaPredicted RBP14.8□□□□□ -0.04
COL4A6-204ENST00000461897 TRAPPC3LQ5T215 181 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
COL4A6-204ENST00000461897 DDX46Q7L014 1031 aaKnown RBP14.8□□□□□ -0.04
COL4A6-204ENST00000461897 SNRKQ9NRH2 765 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 TAF1P21675 1872 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 A0A1B0GUL6 1792 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 MED23Q9ULK4 1368 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 PDE8BO95263 885 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 RFC4P35249 363 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 CCDC183Q5T5S1 534 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 VPS53Q5VIR6 699 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL4A6-204ENST00000461897 SETDB2Q96T68 719 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 ATP6V1DQ9Y5K8 247 aa14.8□□□□□ -0.04
COL4A6-204ENST00000461897 TCHHQ07283 1943 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.79□□□□□ -0.04
COL4A6-204ENST00000461897 STX6O43752 255 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 IFIT1P09914 478 aaKnown RBP14.79□□□□□ -0.04
COL4A6-204ENST00000461897 PDIA4P13667 645 aaKnown RBP14.79□□□□□ -0.04
COL4A6-204ENST00000461897 ADRA2BP18089 450 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 SF3B3Q15393 1217 aaKnown RBP14.79□□□□□ -0.04
COL4A6-204ENST00000461897 SLC10A5Q5PT55 438 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 PROM2Q8N271 834 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 KBTBD3Q8NAB2 608 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 ZSCAN31Q96LW9 406 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-204ENST00000461897 SH2B1Q9NRF2 756 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-204ENST00000461897 PAG1Q9NWQ8 432 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 MROH5Q6ZUA9 1318 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 AKAP11Q9UKA4 1901 aa14.79□□□□□ -0.04
COL4A6-204ENST00000461897 GOLIM4O00461 696 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 CHGBP05060 677 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 UBE2HP62256 183 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 PTH1RQ03431 593 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 NYXQ9GZU5 481 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 ZSWIM6Q9HCJ5 1215 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 TNRC6CQ9HCJ0 1690 aaKnown RBP14.78□□□□□ -0.04
COL4A6-204ENST00000461897 F13A1P00488 732 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 SYT1P21579 422 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 FGFR2P21802 821 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 SCARF1Q14162 830 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 TXNRD1Q16881 649 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 TTC39AQ5SRH9 613 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 NBPF5PQ86XG9 351 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-204ENST00000461897 HELBQ8NG08 1087 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-204ENST00000461897 MPHOSPH8Q99549 860 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 CCDC171Q6TFL3 1326 aa14.78□□□□□ -0.04
COL4A6-204ENST00000461897 RXRBP28702 533 aa14.77□□□□□ -0.05
COL4A6-204ENST00000461897 PUM3Q15397 648 aaKnown RBP14.77□□□□□ -0.05
COL4A6-204ENST00000461897 GORABQ5T7V8 394 aa14.77□□□□□ -0.05
COL4A6-204ENST00000461897 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.05
COL4A6-204ENST00000461897 RGS17Q9UGC6 210 aaPredicted RBP14.77□□□□□ -0.05
COL4A6-204ENST00000461897 SMC3Q9UQE7 1217 aa14.77□□□□□ -0.05
COL4A6-204ENST00000461897 TNS1Q9HBL0 1735 aaKnown RBP14.77□□□□□ -0.05
COL4A6-204ENST00000461897 GTF2E1P29083 439 aaPredicted RBP14.76□□□□□ -0.05
COL4A6-204ENST00000461897 IGHMBP2P38935 993 aaKnown RBP14.76□□□□□ -0.05
COL4A6-204ENST00000461897 NECTIN1Q15223 517 aa14.76□□□□□ -0.05
COL4A6-204ENST00000461897 RNF214Q8ND24 703 aa14.76□□□□□ -0.05
COL4A6-204ENST00000461897 GDPD2Q9HCC8 539 aa14.76□□□□□ -0.05
COL4A6-204ENST00000461897 CARMIL3Q8ND23 1372 aa14.76□□□□□ -0.05
COL4A6-204ENST00000461897 NFIXQ14938 502 aa14.76□□□□□ -0.05
COL4A6-204ENST00000461897 GLIPR1L2Q4G1C9 344 aa14.76□□□□□ -0.05
COL4A6-204ENST00000461897 PI16Q6UXB8 463 aa14.76□□□□□ -0.05
COL4A6-204ENST00000461897 CDC5LQ99459 802 aaKnown RBP14.76□□□□□ -0.05
COL4A6-204ENST00000461897 SNAP23O00161 211 aa14.75□□□□□ -0.05
COL4A6-204ENST00000461897 TAF5LO75529 589 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms