RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 PRC1O43663 620 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 POLA2Q14181 598 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 CHRNA2Q15822 529 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
NCL-207ENST00000461347 SMARCE1Q969G3 411 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 ZBTB9Q96C00 473 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
NCL-207ENST00000461347 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
NCL-207ENST00000461347 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 BRMS1Q9HCU9 246 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 CASQ1P31415 396 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 IARSP41252 1262 aaKnown RBP16.71■□□□□ 0.27
NCL-207ENST00000461347 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
NCL-207ENST00000461347 TAF3Q5VWG9 929 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 ALG1Q9BT22 464 aa16.71■□□□□ 0.27
NCL-207ENST00000461347 TMEM2Q9UHN6 1383 aa16.71■□□□□ 0.26
NCL-207ENST00000461347 RXRAP19793 462 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
NCL-207ENST00000461347 CCDC102BQ68D86 513 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 AK7Q96M32 723 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 ZNF215Q9UL58 517 aaPredicted RBP16.7■□□□□ 0.26
NCL-207ENST00000461347 NECTIN1Q15223 517 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 ACBD3Q9H3P7 528 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
NCL-207ENST00000461347 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 GCKRQ14397 625 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 FTOQ9C0B1 505 aaKnown RBP eCLIP16.7■□□□□ 0.263e-13■■□□□ 14.1
NCL-207ENST00000461347 NAPBQ9H115 298 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
NCL-207ENST00000461347 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.7■□□□□ 0.26
NCL-207ENST00000461347 CWC15Q9P013 229 aaKnown RBP16.7■□□□□ 0.26
NCL-207ENST00000461347 IFIT3O14879 490 aaKnown RBP16.69■□□□□ 0.26
NCL-207ENST00000461347 ZNF790Q6PG37 636 aa16.69■□□□□ 0.26
NCL-207ENST00000461347 NACAP1Q9BZK3 213 aa16.69■□□□□ 0.26
NCL-207ENST00000461347 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
NCL-207ENST00000461347 ERO1AQ96HE7 468 aa16.69■□□□□ 0.26
NCL-207ENST00000461347 GPTP24298 496 aa16.69■□□□□ 0.26
NCL-207ENST00000461347 KIF4BQ2VIQ3 1234 aa16.69■□□□□ 0.26
NCL-207ENST00000461347 LEKR1Q6ZMV7 388 aa16.69■□□□□ 0.26
NCL-207ENST00000461347 CAGE1Q8TC20 777 aa16.69■□□□□ 0.26
NCL-207ENST00000461347 NEXMIFQ5QGS0 1516 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 IL15P40933 162 aaPredicted RBP16.68■□□□□ 0.26
NCL-207ENST00000461347 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 SLC12A7Q9Y666 1083 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 SETD1AO15047 1707 aaKnown RBP16.68■□□□□ 0.26
NCL-207ENST00000461347 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 TAF5LO75529 589 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
NCL-207ENST00000461347 ELP1O95163 1332 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
NCL-207ENST00000461347 METTL22Q9BUU2 404 aaPredicted RBP16.68■□□□□ 0.26
NCL-207ENST00000461347 KIF20AO95235 890 aa16.67■□□□□ 0.26
NCL-207ENST00000461347 TMEM67Q5HYA8 995 aa16.67■□□□□ 0.26
NCL-207ENST00000461347 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
NCL-207ENST00000461347 CALCOCO1Q9P1Z2 691 aa16.67■□□□□ 0.26
NCL-207ENST00000461347 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
NCL-207ENST00000461347 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
NCL-207ENST00000461347 TDRD7Q8NHU6 1098 aaKnown RBP16.67■□□□□ 0.26
NCL-207ENST00000461347 CCDC102AQ96A19 550 aa16.67■□□□□ 0.26
NCL-207ENST00000461347 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
NCL-207ENST00000461347 LRRC8AQ8IWT6 810 aa16.67■□□□□ 0.26
NCL-207ENST00000461347 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
NCL-207ENST00000461347 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
NCL-207ENST00000461347 ERLIN1O75477 346 aa16.66■□□□□ 0.26
NCL-207ENST00000461347 ATP5JP18859 108 aa16.66■□□□□ 0.26
NCL-207ENST00000461347 MPHOSPH8Q99549 860 aa16.66■□□□□ 0.26
NCL-207ENST00000461347 RPAP1Q9BWH6 1393 aaPredicted RBP16.66■□□□□ 0.26
NCL-207ENST00000461347 SASH1O94885 1247 aa16.66■□□□□ 0.26
NCL-207ENST00000461347 WASF1Q92558 559 aa16.66■□□□□ 0.26
NCL-207ENST00000461347 NEURL1BA8MQ27 555 aa16.66■□□□□ 0.26
NCL-207ENST00000461347 NAA16Q6N069 864 aaPredicted RBP16.66■□□□□ 0.26
NCL-207ENST00000461347 C11orf57Q6ZUT1 292 aaPredicted RBP16.66■□□□□ 0.26
NCL-207ENST00000461347 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
NCL-207ENST00000461347 MARCH6O60337 910 aa16.65■□□□□ 0.26
NCL-207ENST00000461347 CYP21A2P08686 494 aa16.65■□□□□ 0.26
NCL-207ENST00000461347 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
NCL-207ENST00000461347 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
NCL-207ENST00000461347 ZNF594Q96JF6 807 aaPredicted RBP16.65■□□□□ 0.26
NCL-207ENST00000461347 XPO4Q9C0E2 1151 aaKnown RBP16.65■□□□□ 0.26
NCL-207ENST00000461347 SSRP1Q08945 709 aaKnown RBP16.65■□□□□ 0.26
NCL-207ENST00000461347 SCRN1Q12765 414 aa16.65■□□□□ 0.26
NCL-207ENST00000461347 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
NCL-207ENST00000461347 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
NCL-207ENST00000461347 KIF5CO60282 957 aa16.65■□□□□ 0.26
NCL-207ENST00000461347 NOC3LQ8WTT2 800 aaKnown RBP16.65■□□□□ 0.26
NCL-207ENST00000461347 KDRP35968 1356 aa16.65■□□□□ 0.26
NCL-207ENST00000461347 ZBTB43O43298 467 aa16.64■□□□□ 0.25
NCL-207ENST00000461347 ARID5BQ14865 1188 aa16.64■□□□□ 0.25
NCL-207ENST00000461347 ATL3Q6DD88 541 aa16.64■□□□□ 0.25
NCL-207ENST00000461347 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms