RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 RPS8P62241 208 aaKnown RBP9.4□□□□□ -0.9
ABCA4-202ENST00000460514 G3BP1Q13283 466 aaKnown RBP eCLIP9.4□□□□□ -0.9
ABCA4-202ENST00000460514 OS9Q13438 667 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-202ENST00000460514 ERC1Q8IUD2 1116 aa9.4□□□□□ -0.9
ABCA4-202ENST00000460514 GCC1Q96CN9 775 aa9.4□□□□□ -0.9
ABCA4-202ENST00000460514 CCDC136Q96JN2 1154 aa9.4□□□□□ -0.9
ABCA4-202ENST00000460514 COPRSQ9NQ92 184 aa9.4□□□□□ -0.9
ABCA4-202ENST00000460514 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
ABCA4-202ENST00000460514 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
ABCA4-202ENST00000460514 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
ABCA4-202ENST00000460514 CIAO1O76071 339 aa9.39□□□□□ -0.91
ABCA4-202ENST00000460514 IL15P40933 162 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-202ENST00000460514 PTPN12Q05209 780 aaKnown RBP9.39□□□□□ -0.91
ABCA4-202ENST00000460514 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
ABCA4-202ENST00000460514 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
ABCA4-202ENST00000460514 TTLL6Q8N841 843 aa9.39□□□□□ -0.91
ABCA4-202ENST00000460514 SEC31BQ9NQW1 1179 aa9.39□□□□□ -0.91
ABCA4-202ENST00000460514 BSDC1Q9NW68 430 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-202ENST00000460514 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
ABCA4-202ENST00000460514 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
ABCA4-202ENST00000460514 LRP5O75197 1615 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 MROH5Q6ZUA9 1318 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 EYA2O00167 538 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 PPEF1O14829 653 aaPredicted RBP9.38□□□□□ -0.91
ABCA4-202ENST00000460514 DPEP1P16444 411 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 CHRNA5P30532 468 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 RFX5P48382 616 aaPredicted RBP9.38□□□□□ -0.91
ABCA4-202ENST00000460514 PDAP1Q13442 181 aaKnown RBP9.38□□□□□ -0.91
ABCA4-202ENST00000460514 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 SOGA3Q5TF21 947 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 CC2D2BQ6DHV5 1058 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
ABCA4-202ENST00000460514 ANKRD2Q9GZV1 360 aa9.38□□□□□ -0.91
ABCA4-202ENST00000460514 DLEC1Q9Y238 1755 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 COL11A2P13942 1736 aaPredicted RBP9.37□□□□□ -0.91
ABCA4-202ENST00000460514 A0A0G2JLW4 131 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 RGS20O76081 388 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 DALRD3Q5D0E6 543 aaKnown RBP9.37□□□□□ -0.91
ABCA4-202ENST00000460514 METTL24Q5JXM2 366 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 PRPF40BQ6NWY9 871 aaKnown RBP9.37□□□□□ -0.91
ABCA4-202ENST00000460514 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
ABCA4-202ENST00000460514 SP8Q8IXZ3 490 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
ABCA4-202ENST00000460514 KIF1BPQ96EK5 621 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
ABCA4-202ENST00000460514 SIL1Q9H173 461 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 DCTPP1Q9H773 170 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 TAOK2Q9UL54 1235 aa9.37□□□□□ -0.91
ABCA4-202ENST00000460514 PA2G4Q9UQ80 394 aaKnown RBP9.37□□□□□ -0.91
ABCA4-202ENST00000460514 KLHDC4Q8TBB5 520 aa9.36□□□□□ -0.91
ABCA4-202ENST00000460514 SYT17Q9BSW7 474 aa9.36□□□□□ -0.91
ABCA4-202ENST00000460514 EXOC6BQ9Y2D4 811 aa9.36□□□□□ -0.91
ABCA4-202ENST00000460514 AKAP2Q9Y2D5 859 aa9.36□□□□□ -0.91
ABCA4-202ENST00000460514 ATP6V0A2Q9Y487 856 aa9.36□□□□□ -0.91
ABCA4-202ENST00000460514 KCNA3P22001 575 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 KCNJ4P48050 445 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 PSEN1P49768 467 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 CHRNDQ07001 517 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 LRRC24Q50LG9 513 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 SMC5Q8IY18 1101 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 CLASRPQ8N2M8 674 aaKnown RBP9.35□□□□□ -0.91
ABCA4-202ENST00000460514 LRRCC1Q9C099 1032 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 ANKIB1Q9P2G1 1089 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 MINPP1Q9UNW1 487 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 RIPOR2Q9Y4F9 1068 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
ABCA4-202ENST00000460514 XDHP47989 1333 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 PDE8BO95263 885 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 IGHDP01880 384 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 PUM3Q15397 648 aaKnown RBP9.34□□□□□ -0.91
ABCA4-202ENST00000460514 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 ATG9AQ7Z3C6 839 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 RTKN2Q8IZC4 609 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 MPNDQ8N594 471 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 SUPT20HQ8NEM7 779 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 NLGN2Q8NFZ4 835 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 RHPN1Q8TCX5 695 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 PUS3Q9BZE2 481 aaKnown RBP9.34□□□□□ -0.91
ABCA4-202ENST00000460514 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 LEMD3Q9Y2U8 911 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 CACNA1SQ13698 1873 aa9.34□□□□□ -0.91
ABCA4-202ENST00000460514 KIAA1551Q9HCM1 1747 aa9.34□□□□□ -0.92
ABCA4-202ENST00000460514 APBB1O00213 710 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 IFIT1P09914 478 aaKnown RBP9.33□□□□□ -0.92
ABCA4-202ENST00000460514 SLC5A1P13866 664 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 TFCP2Q12800 502 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 UBE4AQ14139 1066 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 DPP8Q6V1X1 898 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-202ENST00000460514 EYA3Q99504 573 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 PODXL2Q9NZ53 605 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 NSFL1CQ9UNZ2 370 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms