RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SNX21Q969T3 373 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 MAP2P11137 1827 aaKnown RBP11.24□□□□□ -0.61
UFD1-205ENST00000459854 ANKRD62A6NC57 917 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 SARNPP82979 210 aaKnown RBP11.24□□□□□ -0.61
UFD1-205ENST00000459854 TUBB2AQ13885 445 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 ARFGAP2Q8N6H7 521 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 MARCH10Q8NA82 808 aaPredicted RBP11.24□□□□□ -0.61
UFD1-205ENST00000459854 TUBB2BQ9BVA1 445 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
UFD1-205ENST00000459854 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 FOSBP53539 338 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 VPS36Q86VN1 386 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
UFD1-205ENST00000459854 STMN4Q9H169 189 aaPredicted RBP11.24□□□□□ -0.61
UFD1-205ENST00000459854 ZSCAN25Q6NSZ9 544 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 G3V3G9 751 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 FKBP15Q5T1M5 1219 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 DCAF8Q5TAQ9 597 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 CCDC125Q86Z20 511 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.618e-9■■■□□ 14.6
UFD1-205ENST00000459854 SLIT2O94813 1529 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 ANKRD18BA2A2Z9 1011 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 LIG1P18858 919 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 SIK1P57059 783 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 BMP2KQ9NSY1 1161 aaPredicted RBP11.23□□□□□ -0.61
UFD1-205ENST00000459854 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.23□□□□□ -0.61
UFD1-205ENST00000459854 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
UFD1-205ENST00000459854 ANKS4BQ8N8V4 417 aa11.23□□□□□ -0.61
UFD1-205ENST00000459854 PIGBQ92521 554 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 TRERF1Q96PN7 1200 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 SWAP70Q9UH65 585 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 TNS2Q63HR2 1409 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 GOLIM4O00461 696 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 MSL1Q68DK7 614 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 CFAP57Q96MR6 1250 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 XIRP1Q702N8 1843 aaKnown RBP11.22□□□□□ -0.61
UFD1-205ENST00000459854 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
UFD1-205ENST00000459854 B4GALNT4Q76KP1 1039 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 DAAM2Q86T65 1068 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 ZNF496Q96IT1 587 aaPredicted RBP11.22□□□□□ -0.61
UFD1-205ENST00000459854 CEP63Q96MT8 703 aa11.22□□□□□ -0.61
UFD1-205ENST00000459854 GNPATO15228 680 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 SSFA2P28290 1259 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 KIF5BP33176 963 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 CCDC87Q9NVE4 849 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 RSPH14Q9UHP6 348 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 TRAPPC3LQ5T215 181 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 GOLGA1Q92805 767 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 RAB11FIP3O75154 756 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 BCAR3O75815 825 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 CAPN2P17655 700 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 SEPT6Q14141 434 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 MICALL1Q8N3F8 863 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 OTUD6BQ8N6M0 293 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 ALS2Q96Q42 1657 aa11.21□□□□□ -0.61
UFD1-205ENST00000459854 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.62
UFD1-205ENST00000459854 PALLDQ8WX93 1383 aa11.21□□□□□ -0.62
UFD1-205ENST00000459854 DESP17661 470 aa11.21□□□□□ -0.62
UFD1-205ENST00000459854 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.62
UFD1-205ENST00000459854 SLC27A3Q5K4L6 730 aa11.21□□□□□ -0.62
UFD1-205ENST00000459854 KANK3Q6NY19 840 aa11.21□□□□□ -0.62
UFD1-205ENST00000459854 CCDC121Q6ZUS5 278 aa11.21□□□□□ -0.62
UFD1-205ENST00000459854 ASAP1Q9ULH1 1129 aa11.21□□□□□ -0.62
UFD1-205ENST00000459854 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 CTAGE8P0CG41 777 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
UFD1-205ENST00000459854 CEBPZQ03701 1054 aaKnown RBP11.2□□□□□ -0.62
UFD1-205ENST00000459854 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 CTAGE4Q8IX94 777 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 MPNDQ8N594 471 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 FAM200AQ8TCP9 573 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 LIMCH1Q9UPQ0 1083 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 MEGF6O75095 1541 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 TMCO5BA8MYB1 307 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 DDX46Q7L014 1031 aaKnown RBP11.2□□□□□ -0.62
UFD1-205ENST00000459854 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
UFD1-205ENST00000459854 TTC14Q96N46 770 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 IFI16Q16666 785 aaKnown RBP11.2□□□□□ -0.62
UFD1-205ENST00000459854 DNAJC10Q8IXB1 793 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 ERO1AQ96HE7 468 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
UFD1-205ENST00000459854 POTEAQ6S8J7 498 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 FMNL3Q8IVF7 1028 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 TANGO6Q9C0B7 1094 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 CTDP1Q9Y5B0 961 aaPredicted RBP11.19□□□□□ -0.62
UFD1-205ENST00000459854 PTPRCP08575 1304 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 KRT18P05783 430 aaKnown RBP11.19□□□□□ -0.62
UFD1-205ENST00000459854 ZNF165P49910 485 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 NACAP1Q9BZK3 213 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
UFD1-205ENST00000459854 ATRNO75882 1429 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 DDX21Q9NR30 783 aaKnown RBP eCLIP11.19□□□□□ -0.62
UFD1-205ENST00000459854 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
UFD1-205ENST00000459854 C8orf58Q8NAV2 365 aa11.19□□□□□ -0.62
UFD1-205ENST00000459854 SHPRHQ149N8 1683 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 KIF3CO14782 793 aa11.18□□□□□ -0.62
UFD1-205ENST00000459854 CHPF2Q9P2E5 772 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms