RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 NIP7Q9Y221 180 aaKnown RBP eCLIP6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 SLC27A5Q9Y2P5 690 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 COG6Q9Y2V7 657 aa6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 RRP7AQ9Y3A4 280 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-208ENST00000455546 COL11A2P13942 1736 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 GLTPD2A6NH11 291 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 POTECB2RU33 542 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 RAD21O60216 631 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 SRGNP10124 158 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 MYL6BP14649 208 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 ST5P78524 1137 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 CTDSPL2Q05D32 466 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 DDX10Q13206 875 aaKnown RBP6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 ERFEQ4G0M1 354 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 MORN1Q5T089 497 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 PRPF40BQ6NWY9 871 aaKnown RBP6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 TTLL7Q6ZT98 887 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 KCTD12Q96CX2 325 aaKnown RBP6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 GDPD2Q9HCC8 539 aa6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 HMX1Q9NP08 348 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-208ENST00000455546 BCORQ6W2J9 1755 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 DDNO94850 711 aaPredicted RBP6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 NEFMP07197 916 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 VEGFAP15692 232 aaPredicted RBP6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 EIF2S2P20042 333 aaKnown RBP6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 GTF2E1P29083 439 aaPredicted RBP6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 ABL2P42684 1182 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 EIF4A1P60842 406 aaKnown RBP6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 NFE2L2Q16236 605 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 STYK1Q6J9G0 422 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 CLEC4GQ6UXB4 293 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 TPTE2Q6XPS3 522 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 RNF19BQ6ZMZ0 732 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 LRRN4Q8WUT4 740 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 CNKSR1Q969H4 720 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 ZNF428Q96B54 188 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 MASTLQ96GX5 879 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 WBP1LQ9NX94 342 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 TSR3Q9UJK0 312 aaKnown RBP6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 SCN7AQ01118 1682 aa6.19□□□□□ -1.42
GTF3C3-208ENST00000455546 APBB1O00213 710 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 TCERG1O14776 1098 aaKnown RBP6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 ANXA1P04083 346 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 GPTP24298 496 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 RIPK4P57078 832 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 FSTL1Q12841 308 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 IFFO2Q5TF58 517 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 BLOC1S3Q6QNY0 202 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 SLC51AQ86UW1 340 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 CCDC146Q8IYE0 955 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 SMC1BQ8NDV3 1235 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 PRR7Q8TB68 274 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 C7orf43Q8WVR3 580 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 NECTIN2Q92692 538 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 TAOK3Q9H2K8 898 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 ZNF277Q9NRM2 450 aaPredicted RBP6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 PDZRN3Q9UPQ7 1066 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 ZNF652Q9Y2D9 606 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 PCDHB3Q9Y5E6 796 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 TIAM2Q8IVF5 1701 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 WDR90Q96KV7 1748 aa6.18□□□□□ -1.42
GTF3C3-208ENST00000455546 TNRC6CQ9HCJ0 1690 aaKnown RBP6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 KDM3BQ7LBC6 1761 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 A6NJR5 290 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 TRAK2O60296 914 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 NPR1P16066 1061 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 COPS2P61201 443 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 SUSD4Q5VX71 490 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 POTEGQ6S5H5 508 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 HELBQ8NG08 1087 aaPredicted RBP6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 PNISRQ8TF01 805 aaKnown RBP6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 KLRG1Q96E93 195 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 TSPYL4Q9UJ04 414 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 CEP350Q5VT06 3117 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 MAPK8IP3Q9UPT6 1336 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 TAF1P21675 1872 aa6.17□□□□□ -1.42
GTF3C3-208ENST00000455546 POTEMA6NI47 508 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 ERVV-1B6SEH8 477 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 TMPOP42166 694 aaKnown RBP6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 PTPN5P54829 565 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 AIMP1Q12904 312 aaKnown RBP6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 KRT24Q2M2I5 525 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 PROSER3Q2NL68 480 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 THSD4Q6ZMP0 1018 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 KIF6Q6ZMV9 814 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 CDAN1Q8IWY9 1227 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 SYNE4Q8N205 404 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 EPS8L1Q8TE68 723 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 PNNQ9H307 717 aaKnown RBP6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 LAS1LQ9Y4W2 734 aaKnown RBP6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 MAP3K15Q6ZN16 1313 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 ARFGEF2Q9Y6D5 1785 aa6.16□□□□□ -1.42
GTF3C3-208ENST00000455546 RALBP1Q15311 655 aa6.15□□□□□ -1.42
GTF3C3-208ENST00000455546 CCDC93Q567U6 631 aa6.15□□□□□ -1.42
GTF3C3-208ENST00000455546 COL13A1Q5TAT6 717 aaPredicted RBP6.15□□□□□ -1.42
GTF3C3-208ENST00000455546 RETREG3Q86VR2 466 aa6.15□□□□□ -1.42
GTF3C3-208ENST00000455546 ZNF34Q8IZ26 560 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms