RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 UBA5Q9GZZ9 404 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 LMBRD1Q9NUN5 540 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
SEC16A-207ENST00000453963 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 EBAG9O00559 213 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 UQCRFS1P1P0C7P4 283 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 MARCKSP29966 332 aaPredicted RBP13.72□□□□□ -0.21
SEC16A-207ENST00000453963 SLC39A6Q13433 755 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 KSR2Q6VAB6 950 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
SEC16A-207ENST00000453963 KRT86O43790 486 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 RFC4P35249 363 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 NBPF11Q86T75 865 aa13.72□□□□□ -0.21
SEC16A-207ENST00000453963 WTAPQ15007 396 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 CNNM2Q9H8M5 875 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 FLT4P35916 1363 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 CETN1Q12798 172 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 TICAM2Q86XR7 235 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.21
SEC16A-207ENST00000453963 IGSF3O75054 1194 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 AFMP43652 599 aa13.71□□□□□ -0.21
SEC16A-207ENST00000453963 PSMA7O14818 248 aa13.71□□□□□ -0.22
SEC16A-207ENST00000453963 FAM160A1Q05DH4 1040 aa13.71□□□□□ -0.22
SEC16A-207ENST00000453963 HSP90AA4PQ58FG1 418 aa13.71□□□□□ -0.22
SEC16A-207ENST00000453963 DHX32Q7L7V1 743 aaKnown RBP13.71□□□□□ -0.22
SEC16A-207ENST00000453963 EXOC1Q9NV70 894 aa13.71□□□□□ -0.22
SEC16A-207ENST00000453963 PTPDC1A2A3K4 754 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 NBPF5PQ86XG9 351 aaPredicted RBP13.7□□□□□ -0.22
SEC16A-207ENST00000453963 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 VPS18Q9P253 973 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 ZFYVE9O95405 1425 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 MYO1BO43795 1136 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 LINS1Q8NG48 757 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
SEC16A-207ENST00000453963 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.7□□□□□ -0.22
SEC16A-207ENST00000453963 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
SEC16A-207ENST00000453963 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
SEC16A-207ENST00000453963 KCNA6P17658 529 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 MYL5Q02045 173 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 KIF5AQ12840 1032 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 RTN1Q16799 776 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 HDXQ7Z353 690 aa13.7□□□□□ -0.22
SEC16A-207ENST00000453963 IL15P40933 162 aaPredicted RBP13.69□□□□□ -0.22
SEC16A-207ENST00000453963 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 PRC1O43663 620 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 GCP02774 474 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 EVCP57679 992 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 PDE4BQ07343 736 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 ZNF500O60304 480 aaPredicted RBP13.69□□□□□ -0.22
SEC16A-207ENST00000453963 BAG3O95817 575 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 NF2P35240 595 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 PRPF4BQ13523 1007 aaKnown RBP13.69□□□□□ -0.22
SEC16A-207ENST00000453963 DDB1Q16531 1140 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 ATRIPQ8WXE1 791 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
SEC16A-207ENST00000453963 RASSF4Q9H2L5 321 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 NPATQ14207 1427 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 CCDC152Q4G0S7 254 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 TCERG1LQ5VWI1 586 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 MICALL1Q8N3F8 863 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 ARFGAP2Q8N6H7 521 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
SEC16A-207ENST00000453963 CLSTN2Q9H4D0 955 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 AOX1Q06278 1338 aa13.69□□□□□ -0.22
SEC16A-207ENST00000453963 MTHFSDQ2M296 383 aaKnown RBP13.68□□□□□ -0.22
SEC16A-207ENST00000453963 TTC31Q49AM3 519 aaPredicted RBP13.68□□□□□ -0.22
SEC16A-207ENST00000453963 HOOK3Q86VS8 718 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 CCDC155Q8N6L0 562 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 STAT6P42226 847 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 ZNF75DP51815 510 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 TUBB2AQ13885 445 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 KIAA0753Q2KHM9 967 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 TUBB2BQ9BVA1 445 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 KIAA0556O60303 1618 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 ZNF569Q5MCW4 686 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 CNGA4Q8IV77 575 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 SELENOOQ9BVL4 669 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
SEC16A-207ENST00000453963 U2AF2P26368 475 aaKnown RBP eCLIP13.67□□□□□ -0.221e-7■□□□□ 10.5
SEC16A-207ENST00000453963 HSPA2P54652 639 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 KARSQ15046 597 aaKnown RBP13.67□□□□□ -0.22
SEC16A-207ENST00000453963 SPTY2D1Q68D10 685 aaPredicted RBP13.67□□□□□ -0.22
SEC16A-207ENST00000453963 LMBR1LQ6UX01 489 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 CTNNBL1Q8WYA6 563 aaPredicted RBP13.67□□□□□ -0.22
SEC16A-207ENST00000453963 BAG1Q99933 345 aaPredicted RBP13.67□□□□□ -0.22
SEC16A-207ENST00000453963 NSRP1Q9H0G5 558 aaKnown RBP13.67□□□□□ -0.22
SEC16A-207ENST00000453963 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 WDHD1O75717 1129 aaPredicted RBP13.67□□□□□ -0.22
SEC16A-207ENST00000453963 CCDC172P0C7W6 258 aa13.67□□□□□ -0.22
SEC16A-207ENST00000453963 IL2RBP14784 551 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms