RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 PUS3Q9BZE2 481 aaKnown RBP14.98□□□□□ -0.01
SMPD4-212ENST00000451542 ADARB2Q9NS39 739 aaKnown RBP14.98□□□□□ -0.01
SMPD4-212ENST00000451542 GPRC5DQ9NZD1 345 aa14.98□□□□□ -0.01
SMPD4-212ENST00000451542 DDX19BQ9UMR2 479 aa14.98□□□□□ -0.01
SMPD4-212ENST00000451542 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
SMPD4-212ENST00000451542 MYO3BQ8WXR4 1341 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 PDE8BO95263 885 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 IFIT1P09914 478 aaKnown RBP14.97□□□□□ -0.01
SMPD4-212ENST00000451542 IL15P40933 162 aaPredicted RBP14.97□□□□□ -0.01
SMPD4-212ENST00000451542 SCNN1DP51172 638 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 PTPN12Q05209 780 aaKnown RBP14.97□□□□□ -0.01
SMPD4-212ENST00000451542 CAVIN4Q5BKX8 364 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 USP50Q70EL3 339 aaPredicted RBP14.97□□□□□ -0.01
SMPD4-212ENST00000451542 VPS37DQ86XT2 251 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 AGBL3Q8NEM8 1001 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 COPRSQ9NQ92 184 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 CEP126Q9P2H0 1117 aa14.97□□□□□ -0.01
SMPD4-212ENST00000451542 VIL1P09327 827 aaKnown RBP14.96□□□□□ -0.01
SMPD4-212ENST00000451542 RFX5P48382 616 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-212ENST00000451542 MMP14P50281 582 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 PDE3AQ14432 1141 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 LRRC24Q50LG9 513 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 STRIP1Q5VSL9 837 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 KLHDC4Q8TBB5 520 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 PANK1Q8TE04 598 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 FBXW7Q969H0 707 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 CD209Q9NNX6 404 aa14.96□□□□□ -0.01
SMPD4-212ENST00000451542 CNOT7Q9UIV1 285 aaKnown RBP14.96□□□□□ -0.01
SMPD4-212ENST00000451542 ZBTB7BO15156 539 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-212ENST00000451542 HIBADHP31937 336 aaKnown RBP14.95□□□□□ -0.02
SMPD4-212ENST00000451542 EPS15P42566 896 aa14.95□□□□□ -0.02
SMPD4-212ENST00000451542 MVPQ14764 893 aaKnown RBP14.95□□□□□ -0.02
SMPD4-212ENST00000451542 PUM3Q15397 648 aaKnown RBP14.95□□□□□ -0.02
SMPD4-212ENST00000451542 TTLL5Q6EMB2 1281 aa14.95□□□□□ -0.02
SMPD4-212ENST00000451542 RSBN1LQ6PCB5 846 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-212ENST00000451542 OGFOD1Q8N543 542 aa14.95□□□□□ -0.02
SMPD4-212ENST00000451542 SIL1Q9H173 461 aa14.95□□□□□ -0.02
SMPD4-212ENST00000451542 RLBP1P12271 317 aa14.94□□□□□ -0.02
SMPD4-212ENST00000451542 SLC5A1P13866 664 aa14.94□□□□□ -0.02
SMPD4-212ENST00000451542 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMPD4-212ENST00000451542 TXNRD3Q86VQ6 643 aa14.94□□□□□ -0.02
SMPD4-212ENST00000451542 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-212ENST00000451542 WTIPA6NIX2 430 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-212ENST00000451542 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-212ENST00000451542 HSPA6P17066 643 aa14.93□□□□□ -0.02
SMPD4-212ENST00000451542 MICALL2Q8IY33 904 aa14.93□□□□□ -0.02
SMPD4-212ENST00000451542 ZC3H15Q8WU90 426 aaKnown RBP14.93□□□□□ -0.02
SMPD4-212ENST00000451542 LPIN2Q92539 896 aa14.93□□□□□ -0.02
SMPD4-212ENST00000451542 KCNQ5Q9NR82 932 aa14.93□□□□□ -0.02
SMPD4-212ENST00000451542 HDAC9Q9UKV0 1011 aa14.93□□□□□ -0.02
SMPD4-212ENST00000451542 AKAP2Q9Y2D5 859 aa14.93□□□□□ -0.02
SMPD4-212ENST00000451542 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
SMPD4-212ENST00000451542 PSME4Q14997 1843 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 SNAP23O00161 211 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 USP17L8P0C7I0 530 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 IL1R1P14778 569 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 KLRK1P26718 216 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 GTF2IP78347 998 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 ATP8B2P98198 1209 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 OS9Q13438 667 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-212ENST00000451542 GNL3LQ9NVN8 582 aaKnown RBP14.92□□□□□ -0.02
SMPD4-212ENST00000451542 COG6Q9Y2V7 657 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 SCN9AQ15858 1988 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 ZNF609O15014 1411 aa14.92□□□□□ -0.02
SMPD4-212ENST00000451542 HMMRO75330 724 aa14.91□□□□□ -0.02
SMPD4-212ENST00000451542 SASH1O94885 1247 aa14.91□□□□□ -0.02
SMPD4-212ENST00000451542 APLP1P51693 650 aa14.91□□□□□ -0.02
SMPD4-212ENST00000451542 ATP2B3Q16720 1220 aa14.91□□□□□ -0.02
SMPD4-212ENST00000451542 ATG9AQ7Z3C6 839 aa14.91□□□□□ -0.02
SMPD4-212ENST00000451542 VGLL2Q8N8G2 317 aa14.91□□□□□ -0.02
SMPD4-212ENST00000451542 PA2G4Q9UQ80 394 aaKnown RBP14.91□□□□□ -0.02
SMPD4-212ENST00000451542 GYG1P46976 350 aa14.9□□□□□ -0.02
SMPD4-212ENST00000451542 FKBP1AP62942 108 aaKnown RBP14.9□□□□□ -0.02
SMPD4-212ENST00000451542 DACT2Q5SW24 774 aa14.9□□□□□ -0.02
SMPD4-212ENST00000451542 RPAP2Q8IXW5 612 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-212ENST00000451542 CNTROBQ8N137 903 aa14.9□□□□□ -0.02
SMPD4-212ENST00000451542 TDRD7Q8NHU6 1098 aaKnown RBP14.9□□□□□ -0.02
SMPD4-212ENST00000451542 SSH3Q8TE77 659 aa14.9□□□□□ -0.02
SMPD4-212ENST00000451542 FAM84BQ96KN1 310 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-212ENST00000451542 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
SMPD4-212ENST00000451542 IRS2Q9Y4H2 1338 aa14.9□□□□□ -0.02
SMPD4-212ENST00000451542 PNMA6EA0A0J9YXQ4 647 aa14.89□□□□□ -0.03
SMPD4-212ENST00000451542 SURF6O75683 361 aaKnown RBP14.89□□□□□ -0.03
SMPD4-212ENST00000451542 KIF4BQ2VIQ3 1234 aa14.89□□□□□ -0.03
SMPD4-212ENST00000451542 HSP90AB4PQ58FF6 505 aa14.89□□□□□ -0.03
SMPD4-212ENST00000451542 RBM26Q5T8P6 1007 aaKnown RBP14.89□□□□□ -0.03
SMPD4-212ENST00000451542 FBXO33Q7Z6M2 555 aa14.89□□□□□ -0.03
SMPD4-212ENST00000451542 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
SMPD4-212ENST00000451542 POTEIP0CG38 1075 aa14.88□□□□□ -0.03
SMPD4-212ENST00000451542 POTEJP0CG39 1038 aa14.88□□□□□ -0.03
SMPD4-212ENST00000451542 FGFR2P21802 821 aa14.88□□□□□ -0.03
SMPD4-212ENST00000451542 ZNF280AP59817 542 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-212ENST00000451542 POLA2Q14181 598 aa14.88□□□□□ -0.03
SMPD4-212ENST00000451542 TBC1D10BQ4KMP7 808 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-212ENST00000451542 SAMD7Q7Z3H4 446 aa14.88□□□□□ -0.03
SMPD4-212ENST00000451542 DCPSQ96C86 337 aaKnown RBP14.88□□□□□ -0.03
SMPD4-212ENST00000451542 FAM205AQ6ZU69 1335 aa14.88□□□□□ -0.03
SMPD4-212ENST00000451542 GORABQ5T7V8 394 aa14.87□□□□□ -0.03
SMPD4-212ENST00000451542 MAP1SQ66K74 1059 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms