RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 ATP2B4P23634 1241 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 ARID4AP29374 1257 aaPredicted RBP11.67□□□□□ -0.54
RFC4-210ENST00000449502 ZAP70P43403 619 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
RFC4-210ENST00000449502 WASHC4Q2M389 1173 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 GGA1Q9UJY5 639 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
RFC4-210ENST00000449502 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
RFC4-210ENST00000449502 SNAP23O00161 211 aa11.66□□□□□ -0.54
RFC4-210ENST00000449502 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
RFC4-210ENST00000449502 POLD1P28340 1107 aa11.66□□□□□ -0.54
RFC4-210ENST00000449502 HIBADHP31937 336 aaKnown RBP11.66□□□□□ -0.54
RFC4-210ENST00000449502 BCAMP50895 628 aa11.66□□□□□ -0.54
RFC4-210ENST00000449502 MCMDC2Q4G0Z9 681 aa11.66□□□□□ -0.54
RFC4-210ENST00000449502 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
RFC4-210ENST00000449502 DENND2AQ9ULE3 1009 aa11.66□□□□□ -0.54
RFC4-210ENST00000449502 NSFL1CQ9UNZ2 370 aaKnown RBP11.66□□□□□ -0.54
RFC4-210ENST00000449502 LRP5O75197 1615 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
RFC4-210ENST00000449502 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 SEMA3EO15041 775 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
RFC4-210ENST00000449502 UFL1O94874 794 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 SRGNP10124 158 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 MCAMP43121 646 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 GYG1P46976 350 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 CNKSR1Q969H4 720 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 FAM227BQ96M60 508 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 UBR3Q6ZT12 1888 aa11.65□□□□□ -0.54
RFC4-210ENST00000449502 C4AP0C0L4 1744 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 G3V3G9 751 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 SCARF1Q14162 830 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 RABEP1Q15276 862 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 RNF20Q5VTR2 975 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 STYK1Q6J9G0 422 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 ZNF804AQ7Z570 1209 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 SP8Q8IXZ3 490 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
RFC4-210ENST00000449502 A0A0D9SFI3 127 aa11.63□□□□□ -0.55
RFC4-210ENST00000449502 GPSM2P81274 684 aa11.63□□□□□ -0.55
RFC4-210ENST00000449502 RASGRF1Q13972 1273 aa11.63□□□□□ -0.55
RFC4-210ENST00000449502 SLC9C2Q5TAH2 1124 aa11.63□□□□□ -0.55
RFC4-210ENST00000449502 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
RFC4-210ENST00000449502 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
RFC4-210ENST00000449502 ST18O60284 1047 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 CYP2E1P05181 493 aaPredicted RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 ZKSCAN1P17029 563 aaPredicted RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 ANAPC15P60006 121 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 ZMYM1Q5SVZ6 1142 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 PI16Q6UXB8 463 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 DPP8Q6V1X1 898 aaPredicted RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 MPNDQ8N594 471 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 ZGPATQ8N5A5 531 aaKnown RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 APPBP2Q92624 585 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFC4-210ENST00000449502 FAM84BQ96KN1 310 aaPredicted RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 LSG1Q9H089 658 aaKnown RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 PIH1D3Q9NQM4 214 aaKnown RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 RAI14Q9P0K7 980 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 ABCF2Q9UG63 623 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 IQSEC3Q9UPP2 1182 aaPredicted RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 DDX60Q8IY21 1712 aaKnown RBP11.62□□□□□ -0.55
RFC4-210ENST00000449502 LAMB2P55268 1798 aa11.62□□□□□ -0.55
RFC4-210ENST00000449502 CCDC171Q6TFL3 1326 aa11.61□□□□□ -0.55
RFC4-210ENST00000449502 ZBTB7AO95365 584 aa11.61□□□□□ -0.55
RFC4-210ENST00000449502 R3HDM1Q15032 1099 aaKnown RBP11.61□□□□□ -0.55
RFC4-210ENST00000449502 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
RFC4-210ENST00000449502 SPTY2D1Q68D10 685 aaPredicted RBP11.61□□□□□ -0.55
RFC4-210ENST00000449502 EYA3Q99504 573 aa11.61□□□□□ -0.55
RFC4-210ENST00000449502 ZC3H12CQ9C0D7 883 aaKnown RBP11.61□□□□□ -0.55
RFC4-210ENST00000449502 MTFR1LQ9H019 292 aa11.61□□□□□ -0.55
RFC4-210ENST00000449502 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
RFC4-210ENST00000449502 PDE6AP16499 860 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 HSPA4P34932 840 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 ADD2P35612 726 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 CC2D2BQ6DHV5 1058 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 PRPF40BQ6NWY9 871 aaKnown RBP11.6□□□□□ -0.55
RFC4-210ENST00000449502 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
RFC4-210ENST00000449502 MAGEB6Q8N7X4 407 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 IL27Q8NEV9 243 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 TBC1D16Q8TBP0 767 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 WDR66Q8TBY9 1149 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 AIDAQ96BJ3 306 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 CTNNA3Q9UI47 895 aa11.6□□□□□ -0.55
RFC4-210ENST00000449502 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
RFC4-210ENST00000449502 RBM8AQ9Y5S9 174 aaKnown RBP11.6□□□□□ -0.55
RFC4-210ENST00000449502 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
RFC4-210ENST00000449502 ZNF532Q9HCE3 1301 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms