RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 JPH3Q8WXH2 748 aaPredicted RBP4.79□□□□□ -1.64
UBR3-206ENST00000444475 DMRTB1Q96MA1 342 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 HERPUD2Q9BSE4 406 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 SARGQ9BW04 601 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 ZNF652Q9Y2D9 606 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 CFAP99D6REC4 459 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 FZD6O60353 706 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 RASGRP1O95267 797 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 NEK2P51955 445 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 ZNF280AP59817 542 aaPredicted RBP4.79□□□□□ -1.64
UBR3-206ENST00000444475 ROR1Q01973 937 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 KCNH2Q12809 1159 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 PIN1Q13526 163 aaPredicted RBP4.79□□□□□ -1.64
UBR3-206ENST00000444475 SPECC1Q5M775 1068 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 JAKMIP3Q5VZ66 844 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 TOGARAM2Q6ZUX3 1019 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 HS2ST1Q7LGA3 356 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 UBE2Q1Q7Z7E8 422 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 NKAPQ8N5F7 415 aaKnown RBP4.79□□□□□ -1.64
UBR3-206ENST00000444475 HNRNPLLQ8WVV9 542 aaKnown RBP4.79□□□□□ -1.64
UBR3-206ENST00000444475 ANP32BQ92688 251 aaKnown RBP4.79□□□□□ -1.64
UBR3-206ENST00000444475 WASHC2AQ641Q2 1341 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 CD151P48509 253 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 PLCB3Q01970 1234 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 IFT88Q13099 833 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 NR6A1Q15406 480 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 C2orf27AQ580R0 203 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 ESCO1Q5FWF5 840 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 AFAP1L2Q8N4X5 818 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 MAFFQ9ULX9 164 aa4.79□□□□□ -1.64
UBR3-206ENST00000444475 POTEFA5A3E0 1075 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 RFPL1O75677 317 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 UBA7P41226 1012 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 CASP7P55210 303 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 FAM160A1Q05DH4 1040 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 KIAA0825Q8IV33 1275 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 ANKRD42Q8N9B4 389 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 SMYD2Q9NRG4 433 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 SNX2O60749 519 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 EYA4O95677 639 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 DDIT3P35638 169 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 ECE1P42892 770 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 MAPK8P45983 427 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 KRT83P78385 493 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 FKBP5Q13451 457 aaPredicted RBP4.78□□□□□ -1.64
UBR3-206ENST00000444475 PUM3Q15397 648 aaKnown RBP4.78□□□□□ -1.64
UBR3-206ENST00000444475 MMS22LQ6ZRQ5 1243 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 C11orf74Q86VG3 221 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 BRSK2Q8IWQ3 736 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 PJA1Q8NG27 643 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 SH3GLB2Q9NR46 395 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 STRN4Q9NRL3 753 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 RAI14Q9P0K7 980 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 GTPBP10A4D1E9 387 aaKnown RBP4.78□□□□□ -1.64
UBR3-206ENST00000444475 APPP05067 770 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 NEK3P51956 506 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 GALEQ14376 348 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 IL31Q6EBC2 164 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 ARL6IP6Q8N6S5 226 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 TMEM51Q9NW97 253 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 PLAAQ9Y263 795 aa4.78□□□□□ -1.64
UBR3-206ENST00000444475 RBM19Q9Y4C8 960 aaKnown RBP4.78□□□□□ -1.64
UBR3-206ENST00000444475 ERCC6Q03468 1493 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 LMNB1P20700 586 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 CAP2P40123 477 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 PRSS12P56730 875 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 LAMC2Q13753 1193 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 CC2D1BQ5T0F9 858 aaKnown RBP4.77□□□□□ -1.65
UBR3-206ENST00000444475 OR8H2Q8N162 312 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 ENAHQ8N8S7 591 aaPredicted RBP4.77□□□□□ -1.65
UBR3-206ENST00000444475 CERKQ8TCT0 537 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 SOX9P48436 509 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 BPIFB3P59826 476 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 MAP2K1Q02750 393 aaPredicted RBP4.77□□□□□ -1.65
UBR3-206ENST00000444475 SFSWAPQ12872 951 aaKnown RBP4.77□□□□□ -1.65
UBR3-206ENST00000444475 TTLL5Q6EMB2 1281 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 SMARCC1Q92922 1105 aaPredicted RBP4.77□□□□□ -1.65
UBR3-206ENST00000444475 SLC4A8Q2Y0W8 1093 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 DNAJC21Q5F1R6 531 aaKnown RBP4.77□□□□□ -1.65
UBR3-206ENST00000444475 MZT2BQ6NZ67 158 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 XPO4Q9C0E2 1151 aaKnown RBP4.77□□□□□ -1.65
UBR3-206ENST00000444475 DGKBQ9Y6T7 804 aa4.77□□□□□ -1.65
UBR3-206ENST00000444475 ANO9A1A5B4 782 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 PGRP06401 933 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 RAC2P15153 192 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 FOSL1P15407 271 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 TNFAIP3P21580 790 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 PADI6Q6TGC4 694 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 CELF2-AS1Q8N7Q2 184 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 RHOBTB2Q9BYZ6 727 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 NEUROD4Q9HD90 331 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 RASSF1Q9NS23 344 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 OBP2AQ9NY56 170 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 COQ9O75208 318 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 FAM13AO94988 1023 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 OAS2P29728 719 aaKnown RBP4.76□□□□□ -1.65
UBR3-206ENST00000444475 GTF2A2P52657 109 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 PFKPQ01813 784 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 MLC1Q15049 377 aa4.76□□□□□ -1.65
UBR3-206ENST00000444475 AKAP4Q5JQC9 854 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms