RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 HELLSQ9NRZ9 838 aa25.76■■□□□ 1.72
CTDSPL-206ENST00000443503 KIF24Q5T7B8 1368 aa25.76■■□□□ 1.72
CTDSPL-206ENST00000443503 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 SYNMO15061 1565 aa25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 ENOX2Q16206 610 aaKnown RBP25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 MAGEB6P1A0A0J9YX57 407 aa25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 EIF3JO75822 258 aaKnown RBP25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 ITGA6P23229 1130 aa25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 MLH3Q9UHC1 1453 aa25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 TSPY3P0CV98 308 aa25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 TSPY8P0CW00 308 aa25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 MTIF2P46199 727 aaKnown RBP25.76■■□□□ 1.71
CTDSPL-206ENST00000443503 CCDC66A2RUB6 948 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 DNAJC10Q8IXB1 793 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 TSG101Q99816 390 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 UBAP1LF5GYI3 381 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 UBASH3AP57075 661 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 TOM1O60784 492 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 EDC3Q96F86 508 aaKnown RBP25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 CALML4Q96GE6 196 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 TPTE2Q6XPS3 522 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 KBTBD3Q8NAB2 608 aa25.75■■□□□ 1.71
CTDSPL-206ENST00000443503 AATKQ6ZMQ8 1374 aa25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 NOLC1Q14978 699 aaKnown RBP eCLIP25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 FAM135BQ49AJ0 1406 aa25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 LMOD1P29536 600 aaPredicted RBP25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 LEKR1Q6ZMV7 388 aa25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 CWC15Q9P013 229 aaKnown RBP25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 PRDM15P57071 1507 aaPredicted RBP25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 CCDC148Q8NFR7 591 aa25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 SH3TC1Q8TE82 1336 aa25.74■■□□□ 1.71
CTDSPL-206ENST00000443503 PPP1R12BO60237 982 aaPredicted RBP25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 MBD4O95243 580 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 FAM193AP78312 1265 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 SKILP12757 684 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 HSPA4P34932 840 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 SNW1Q13573 536 aaKnown RBP25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 ZNF622Q969S3 477 aaKnown RBP eCLIP25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 XAGE2Q96GT9 111 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 YEATS4O95619 227 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 GNAT2P19087 354 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 CASQ1P31415 396 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 GSTO1P78417 241 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 TRIM75PA6NK02 468 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 N4BP3O15049 544 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 IQCEQ6IPM2 695 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 JAG2Q9Y219 1238 aa25.73■■□□□ 1.71
CTDSPL-206ENST00000443503 F8W031 263 aaPredicted RBP25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 NCOA5Q9HCD5 579 aaKnown RBP25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 CCDC102AQ96A19 550 aa25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 NSFL1CQ9UNZ2 370 aaKnown RBP25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 NEURL1BA8MQ27 555 aa25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 BMP15O95972 392 aa25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 HLA-DOAP06340 250 aa25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 TAF4BQ92750 862 aa25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 ZKSCAN3Q9BRR0 538 aa25.72■■□□□ 1.71
CTDSPL-206ENST00000443503 ST5P78524 1137 aa25.71■■□□□ 1.71
CTDSPL-206ENST00000443503 TDRD12Q587J7 1177 aaKnown RBP25.71■■□□□ 1.71
CTDSPL-206ENST00000443503 PYM1Q9BRP8 204 aaKnown RBP25.71■■□□□ 1.71
CTDSPL-206ENST00000443503 MCM9Q9NXL9 1143 aa25.71■■□□□ 1.71
CTDSPL-206ENST00000443503 AMPD3Q01432 767 aa25.71■■□□□ 1.71
CTDSPL-206ENST00000443503 RBSNQ9H1K0 784 aa25.71■■□□□ 1.71
CTDSPL-206ENST00000443503 CENPHQ9H3R5 247 aa25.71■■□□□ 1.71
CTDSPL-206ENST00000443503 PRR36Q9H6K5 1346 aa25.7■■□□□ 1.71
CTDSPL-206ENST00000443503 FGFR1OPO95684 399 aaKnown RBP25.7■■□□□ 1.71
CTDSPL-206ENST00000443503 CCDC150Q8NCX0 1101 aa25.7■■□□□ 1.71
CTDSPL-206ENST00000443503 ERLIN2O94905 339 aa25.7■■□□□ 1.7
CTDSPL-206ENST00000443503 CUL5Q93034 780 aa25.7■■□□□ 1.7
CTDSPL-206ENST00000443503 EAF2Q96CJ1 260 aaPredicted RBP25.7■■□□□ 1.7
CTDSPL-206ENST00000443503 B4E1Z4 1266 aa25.7■■□□□ 1.7
CTDSPL-206ENST00000443503 APPBP2Q92624 585 aa25.7■■□□□ 1.7
CTDSPL-206ENST00000443503 HEATR3Q7Z4Q2 680 aa25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 H0YHG0 523 aa25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 BEND3Q5T5X7 828 aa25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 LUZP1Q86V48 1076 aa25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 GOLGA6L10A6NI86 522 aa25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 GNAQP50148 359 aa25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 RTCBQ9Y3I0 505 aaKnown RBP25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 ROBO2Q9HCK4 1378 aa25.69■■□□□ 1.7
CTDSPL-206ENST00000443503 GPAA1O43292 621 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 DNA2P51530 1060 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 CBX1P83916 185 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 BRAPQ7Z569 592 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 PALD1Q9ULE6 856 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 RDXP35241 583 aaKnown RBP25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 TRIM47Q96LD4 638 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 RRAGBQ5VZM2 374 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 DHX58Q96C10 678 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 A0A1B0GVL5 298 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 GNG11P61952 73 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 TRMT1LQ7Z2T5 733 aaKnown RBP25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 NYXQ9GZU5 481 aa25.68■■□□□ 1.7
CTDSPL-206ENST00000443503 TNIP1Q15025 636 aa25.67■■□□□ 1.7
CTDSPL-206ENST00000443503 CEP135Q66GS9 1140 aa25.67■■□□□ 1.7
CTDSPL-206ENST00000443503 KIF20AO95235 890 aa25.67■■□□□ 1.7
CTDSPL-206ENST00000443503 EFCAB6Q5THR3 1501 aa25.67■■□□□ 1.7
CTDSPL-206ENST00000443503 PRIMPOLQ96LW4 560 aa25.66■■□□□ 1.7
CTDSPL-206ENST00000443503 PHKG2P15735 406 aa25.66■■□□□ 1.7
CTDSPL-206ENST00000443503 CCDC40Q4G0X9 1142 aa25.66■■□□□ 1.7
CTDSPL-206ENST00000443503 IGSF1Q8N6C5 1336 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms