RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SRLQ86TD4 932 aa19.57■□□□□ 0.72
PMS1-213ENST00000441310 SASH3O75995 380 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
PMS1-213ENST00000441310 CCDC93Q567U6 631 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 SUCLG2Q96I99 432 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 PGBD1Q96JS3 809 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 STAP2Q9UGK3 403 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 NCAPD2Q15021 1401 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 LMO7Q8WWI1 1683 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 MYD88Q99836 296 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 DNAI1Q9UI46 699 aa19.56■□□□□ 0.72
PMS1-213ENST00000441310 PRPF40BQ6NWY9 871 aaKnown RBP19.55■□□□□ 0.72
PMS1-213ENST00000441310 KDM3BQ7LBC6 1761 aa19.55■□□□□ 0.72
PMS1-213ENST00000441310 ATP5J2-PTCD1G3V325 749 aa19.55■□□□□ 0.72
PMS1-213ENST00000441310 PTCD1O75127 700 aaKnown RBP19.55■□□□□ 0.72
PMS1-213ENST00000441310 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
PMS1-213ENST00000441310 BICC1Q9H694 974 aaKnown RBP19.55■□□□□ 0.72
PMS1-213ENST00000441310 SH2B1Q9NRF2 756 aaPredicted RBP19.55■□□□□ 0.72
PMS1-213ENST00000441310 ATG3Q9NT62 314 aa19.55■□□□□ 0.72
PMS1-213ENST00000441310 GRM8O00222 908 aa19.54■□□□□ 0.72
PMS1-213ENST00000441310 ZSCAN31Q96LW9 406 aaPredicted RBP19.54■□□□□ 0.72
PMS1-213ENST00000441310 CYP46A1Q9Y6A2 500 aa19.54■□□□□ 0.72
PMS1-213ENST00000441310 KIF1AQ12756 1690 aa19.54■□□□□ 0.72
PMS1-213ENST00000441310 HEG1Q9ULI3 1381 aa19.54■□□□□ 0.72
PMS1-213ENST00000441310 PHRF1Q9P1Y6 1649 aaKnown RBP19.54■□□□□ 0.72
PMS1-213ENST00000441310 KDM4FA0A1W2PPD8 638 aa19.54■□□□□ 0.72
PMS1-213ENST00000441310 IGKV5-2P06315 115 aa19.54■□□□□ 0.72
PMS1-213ENST00000441310 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
PMS1-213ENST00000441310 DCAF5Q96JK2 942 aa19.54■□□□□ 0.72
PMS1-213ENST00000441310 FBXO18Q8NFZ0 1043 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 LINS1Q8NG48 757 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 AK7Q96M32 723 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 DRC1Q96MC2 740 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.53■□□□□ 0.72
PMS1-213ENST00000441310 ALS2Q96Q42 1657 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 URI1O94763 535 aaPredicted RBP19.53■□□□□ 0.72
PMS1-213ENST00000441310 CTR9Q6PD62 1173 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 TCEANC2Q96MN5 208 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 CARD6Q9BX69 1037 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 PXDNLA1KZ92 1463 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 TBC1D8O95759 1140 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 VPS53Q5VIR6 699 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 REXO1L1PQ8IX06 675 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 GOLGA6L1Q8N7Z2 621 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 TPCN1Q9ULQ1 816 aa19.53■□□□□ 0.72
PMS1-213ENST00000441310 RAB11FIP3O75154 756 aa19.52■□□□□ 0.72
PMS1-213ENST00000441310 LARP1Q6PKG0 1096 aaKnown RBP19.52■□□□□ 0.72
PMS1-213ENST00000441310 GPATCH11Q8N954 259 aa19.52■□□□□ 0.72
PMS1-213ENST00000441310 GOLGA5Q8TBA6 731 aa19.52■□□□□ 0.72
PMS1-213ENST00000441310 ERCC4Q92889 916 aaPredicted RBP19.52■□□□□ 0.72
PMS1-213ENST00000441310 KAT6BQ8WYB5 2073 aa19.52■□□□□ 0.72
PMS1-213ENST00000441310 EPB41L2O43491 1005 aaKnown RBP19.52■□□□□ 0.72
PMS1-213ENST00000441310 ALDH1L1O75891 902 aa19.52■□□□□ 0.72
PMS1-213ENST00000441310 PTH1RQ03431 593 aa19.51■□□□□ 0.71
PMS1-213ENST00000441310 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
PMS1-213ENST00000441310 STX1AQ16623 288 aa19.51■□□□□ 0.71
PMS1-213ENST00000441310 AOPEPQ8N6M6 819 aa19.51■□□□□ 0.71
PMS1-213ENST00000441310 SNRPA1P09661 255 aaKnown RBP19.51■□□□□ 0.71
PMS1-213ENST00000441310 EVA1CP58658 441 aa19.51■□□□□ 0.71
PMS1-213ENST00000441310 ZNF330Q9Y3S2 320 aaPredicted RBP19.51■□□□□ 0.71
PMS1-213ENST00000441310 CAVIN2O95810 425 aa19.51■□□□□ 0.71
PMS1-213ENST00000441310 IFIT2P09913 472 aaKnown RBP19.51■□□□□ 0.71
PMS1-213ENST00000441310 GSDMDP57764 484 aa19.51■□□□□ 0.71
PMS1-213ENST00000441310 NEXNQ0ZGT2 675 aa19.51■□□□□ 0.71
PMS1-213ENST00000441310 STK3Q13188 491 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 ANKRD13DQ6ZTN6 518 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 TMC6Q7Z403 805 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 PI4K2BQ8TCG2 481 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 CCDC8Q9H0W5 538 aaPredicted RBP19.5■□□□□ 0.71
PMS1-213ENST00000441310 ADAM21Q9UKJ8 722 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 JRKLQ9Y4A0 524 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 EVCP57679 992 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 EPHA10Q5JZY3 1008 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 CLASRPQ8N2M8 674 aaKnown RBP19.5■□□□□ 0.71
PMS1-213ENST00000441310 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 UBXN6Q9BZV1 441 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 HDAC5Q9UQL6 1122 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 TUBGCP6Q96RT7 1819 aa19.5■□□□□ 0.71
PMS1-213ENST00000441310 PDCP20941 246 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 DHX40Q8IX18 779 aaKnown RBP19.49■□□□□ 0.71
PMS1-213ENST00000441310 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
PMS1-213ENST00000441310 SMC2O95347 1197 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 COL9A3Q14050 684 aaPredicted RBP19.49■□□□□ 0.71
PMS1-213ENST00000441310 TTC31Q49AM3 519 aaPredicted RBP19.49■□□□□ 0.71
PMS1-213ENST00000441310 CC2D1AQ6P1N0 951 aaPredicted RBP19.49■□□□□ 0.71
PMS1-213ENST00000441310 AACSQ86V21 672 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
PMS1-213ENST00000441310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.49■□□□□ 0.715e-7■■■□□ 15.2
PMS1-213ENST00000441310 DCCP43146 1447 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 A0A1B0GUL7 405 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 TADA3O75528 432 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 SART3Q15020 963 aaKnown RBP19.49■□□□□ 0.71
PMS1-213ENST00000441310 PACS2Q86VP3 889 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 DDX11Q96FC9 970 aa19.49■□□□□ 0.71
PMS1-213ENST00000441310 ARMCX5Q6P1M9 558 aa19.48■□□□□ 0.71
PMS1-213ENST00000441310 NBPF11Q86T75 865 aa19.48■□□□□ 0.71
PMS1-213ENST00000441310 CNTROBQ8N137 903 aa19.48■□□□□ 0.71
PMS1-213ENST00000441310 MYCBPQ99417 103 aaPredicted RBP19.48■□□□□ 0.71
PMS1-213ENST00000441310 KCND1Q9NSA2 647 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms