RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 COA1Q9GZY4 146 aa25.72■■□□□ 1.71
UBE2F-212ENST00000439338 TRIM27P14373 513 aa25.71■■□□□ 1.71
UBE2F-212ENST00000439338 INTS3Q68E01 1043 aaKnown RBP25.71■■□□□ 1.71
UBE2F-212ENST00000439338 RSBN1LQ6PCB5 846 aaPredicted RBP25.71■■□□□ 1.71
UBE2F-212ENST00000439338 ATF7IPQ6VMQ6 1270 aa25.71■■□□□ 1.71
UBE2F-212ENST00000439338 ZNF609O15014 1411 aa25.71■■□□□ 1.71
UBE2F-212ENST00000439338 IRS2Q9Y4H2 1338 aa25.7■■□□□ 1.71
UBE2F-212ENST00000439338 USP17L3A6NCW0 530 aa25.7■■□□□ 1.7
UBE2F-212ENST00000439338 USP17L4A6NCW7 530 aa25.7■■□□□ 1.7
UBE2F-212ENST00000439338 USP17L1Q7RTZ2 530 aa25.7■■□□□ 1.7
UBE2F-212ENST00000439338 HIRAP54198 1017 aaPredicted RBP25.69■■□□□ 1.7
UBE2F-212ENST00000439338 SAMD7Q7Z3H4 446 aa25.69■■□□□ 1.7
UBE2F-212ENST00000439338 DNAJC5GQ8N7S2 189 aa25.69■■□□□ 1.7
UBE2F-212ENST00000439338 KLHDC4Q8TBB5 520 aa25.69■■□□□ 1.7
UBE2F-212ENST00000439338 FBXW7Q969H0 707 aa25.69■■□□□ 1.7
UBE2F-212ENST00000439338 MEIS3Q99687 375 aa25.69■■□□□ 1.7
UBE2F-212ENST00000439338 TBC1D10BQ4KMP7 808 aaPredicted RBP25.68■■□□□ 1.7
UBE2F-212ENST00000439338 LRRC24Q50LG9 513 aa25.68■■□□□ 1.7
UBE2F-212ENST00000439338 RIPOR2Q9Y4F9 1068 aa25.68■■□□□ 1.7
UBE2F-212ENST00000439338 C15orf52Q6ZUT6 534 aaKnown RBP25.67■■□□□ 1.7
UBE2F-212ENST00000439338 AGBL3Q8NEM8 1001 aa25.67■■□□□ 1.7
UBE2F-212ENST00000439338 CLUAP1Q96AJ1 413 aa25.67■■□□□ 1.7
UBE2F-212ENST00000439338 LRRFIP2Q9Y608 721 aaKnown RBP25.67■■□□□ 1.7
UBE2F-212ENST00000439338 MROH5Q6ZUA9 1318 aa25.66■■□□□ 1.7
UBE2F-212ENST00000439338 EGFRP00533 1210 aa25.66■■□□□ 1.7
UBE2F-212ENST00000439338 RFX5P48382 616 aaPredicted RBP25.66■■□□□ 1.7
UBE2F-212ENST00000439338 ZKSCAN2Q63HK3 967 aa25.66■■□□□ 1.7
UBE2F-212ENST00000439338 CD209Q9NNX6 404 aa25.66■■□□□ 1.7
UBE2F-212ENST00000439338 DACT2Q5SW24 774 aa25.65■■□□□ 1.7
UBE2F-212ENST00000439338 RBM26Q5T8P6 1007 aaKnown RBP25.65■■□□□ 1.7
UBE2F-212ENST00000439338 KLRG1Q96E93 195 aa25.65■■□□□ 1.7
UBE2F-212ENST00000439338 GMLQ99445 158 aa25.65■■□□□ 1.7
UBE2F-212ENST00000439338 MXD3Q9BW11 206 aa25.65■■□□□ 1.7
UBE2F-212ENST00000439338 CREBZFQ9NS37 354 aa25.65■■□□□ 1.7
UBE2F-212ENST00000439338 UBE4AQ14139 1066 aa25.64■■□□□ 1.7
UBE2F-212ENST00000439338 KIF4BQ2VIQ3 1234 aa25.64■■□□□ 1.7
UBE2F-212ENST00000439338 METTL24Q5JXM2 366 aa25.64■■□□□ 1.7
UBE2F-212ENST00000439338 STRIP1Q5VSL9 837 aa25.64■■□□□ 1.7
UBE2F-212ENST00000439338 ZNF804AQ7Z570 1209 aa25.64■■□□□ 1.7
UBE2F-212ENST00000439338 ZC3H15Q8WU90 426 aaKnown RBP25.64■■□□□ 1.7
UBE2F-212ENST00000439338 PGAP2Q9UHJ9 254 aa25.64■■□□□ 1.7
UBE2F-212ENST00000439338 HDAC5Q9UQL6 1122 aa25.64■■□□□ 1.7
UBE2F-212ENST00000439338 FMR1Q06787 632 aaKnown RBP eCLIP25.63■■□□□ 1.693e-6■■■■□ 23.7
UBE2F-212ENST00000439338 TRPM7Q96QT4 1865 aa25.63■■□□□ 1.69
UBE2F-212ENST00000439338 TMEM88BA6NKF7 163 aa25.62■■□□□ 1.69
UBE2F-212ENST00000439338 TRAF5O00463 557 aa25.62■■□□□ 1.69
UBE2F-212ENST00000439338 GNAI3P08754 354 aa25.62■■□□□ 1.69
UBE2F-212ENST00000439338 ZNF280AP59817 542 aaPredicted RBP25.62■■□□□ 1.69
UBE2F-212ENST00000439338 GTF2IP78347 998 aa25.62■■□□□ 1.69
UBE2F-212ENST00000439338 PTPN12Q05209 780 aaKnown RBP25.62■■□□□ 1.69
UBE2F-212ENST00000439338 TTLL5Q6EMB2 1281 aa25.62■■□□□ 1.69
UBE2F-212ENST00000439338 TMEM57Q8N5G2 664 aa25.62■■□□□ 1.69
UBE2F-212ENST00000439338 USP17L8P0C7I0 530 aa25.61■■□□□ 1.69
UBE2F-212ENST00000439338 VGLL2Q8N8G2 317 aa25.61■■□□□ 1.69
UBE2F-212ENST00000439338 GLIS2Q9BZE0 524 aaPredicted RBP25.61■■□□□ 1.69
UBE2F-212ENST00000439338 MYO3BQ8WXR4 1341 aa25.61■■□□□ 1.69
UBE2F-212ENST00000439338 POLR2AP24928 1970 aaKnown RBP25.6■■□□□ 1.69
UBE2F-212ENST00000439338 EYA2O00167 538 aa25.6■■□□□ 1.69
UBE2F-212ENST00000439338 IL1R1P14778 569 aa25.6■■□□□ 1.69
UBE2F-212ENST00000439338 PDE8BO95263 885 aa25.58■■□□□ 1.69
UBE2F-212ENST00000439338 GYG1P46976 350 aa25.58■■□□□ 1.69
UBE2F-212ENST00000439338 FTSJ3Q8IY81 847 aaKnown RBP25.58■■□□□ 1.69
UBE2F-212ENST00000439338 SIL1Q9H173 461 aa25.58■■□□□ 1.69
UBE2F-212ENST00000439338 MYOZ2Q9NPC6 264 aa25.58■■□□□ 1.69
UBE2F-212ENST00000439338 CDC37L1Q7L3B6 337 aa25.57■■□□□ 1.68
UBE2F-212ENST00000439338 MKRN1Q9UHC7 482 aaKnown RBP25.57■■□□□ 1.68
UBE2F-212ENST00000439338 ASTN2O75129 1339 aaPredicted RBP25.57■■□□□ 1.68
UBE2F-212ENST00000439338 HIBADHP31937 336 aaKnown RBP25.56■■□□□ 1.68
UBE2F-212ENST00000439338 ATG9AQ7Z3C6 839 aa25.56■■□□□ 1.68
UBE2F-212ENST00000439338 USP48Q86UV5 1035 aa25.56■■□□□ 1.68
UBE2F-212ENST00000439338 DZIP1LQ8IYY4 767 aaKnown RBP25.56■■□□□ 1.68
UBE2F-212ENST00000439338 FAM84BQ96KN1 310 aaPredicted RBP25.56■■□□□ 1.68
UBE2F-212ENST00000439338 GGA3Q9NZ52 723 aa25.56■■□□□ 1.68
UBE2F-212ENST00000439338 PA2G4Q9UQ80 394 aaKnown RBP25.56■■□□□ 1.68
UBE2F-212ENST00000439338 JAG2Q9Y219 1238 aa25.56■■□□□ 1.68
UBE2F-212ENST00000439338 KIAA0825Q8IV33 1275 aa25.55■■□□□ 1.68
UBE2F-212ENST00000439338 CNTNAP1P78357 1384 aa25.55■■□□□ 1.68
UBE2F-212ENST00000439338 CIAO1O76071 339 aa25.54■■□□□ 1.68
UBE2F-212ENST00000439338 GNAI2P04899 355 aa25.54■■□□□ 1.68
UBE2F-212ENST00000439338 RLBP1P12271 317 aa25.54■■□□□ 1.68
UBE2F-212ENST00000439338 SCARF1Q14162 830 aa25.54■■□□□ 1.68
UBE2F-212ENST00000439338 PUM3Q15397 648 aaKnown RBP25.54■■□□□ 1.68
UBE2F-212ENST00000439338 OGFOD1Q8N543 542 aa25.54■■□□□ 1.68
UBE2F-212ENST00000439338 CERS5Q8N5B7 392 aa25.54■■□□□ 1.68
UBE2F-212ENST00000439338 DCPSQ96C86 337 aaKnown RBP25.54■■□□□ 1.68
UBE2F-212ENST00000439338 FBXO3Q9UK99 471 aa25.54■■□□□ 1.68
UBE2F-212ENST00000439338 SRGAP3O43295 1099 aa25.53■■□□□ 1.68
UBE2F-212ENST00000439338 CELF2O95319 508 aaKnown RBP25.53■■□□□ 1.68
UBE2F-212ENST00000439338 FGFR2P21802 821 aa25.53■■□□□ 1.68
UBE2F-212ENST00000439338 MTX1Q13505 466 aa25.53■■□□□ 1.68
UBE2F-212ENST00000439338 CST9Q5W186 159 aa25.53■■□□□ 1.68
UBE2F-212ENST00000439338 KRT26Q7Z3Y9 468 aa25.53■■□□□ 1.68
UBE2F-212ENST00000439338 JMYQ8N9B5 988 aa25.53■■□□□ 1.68
UBE2F-212ENST00000439338 TDRD7Q8NHU6 1098 aaKnown RBP25.53■■□□□ 1.68
UBE2F-212ENST00000439338 COPRSQ9NQ92 184 aa25.53■■□□□ 1.68
UBE2F-212ENST00000439338 ABT1Q9ULW3 272 aaKnown RBP25.53■■□□□ 1.68
UBE2F-212ENST00000439338 ADM5C9JUS6 153 aa25.52■■□□□ 1.68
UBE2F-212ENST00000439338 DLK2Q6UY11 383 aa25.52■■□□□ 1.68
UBE2F-212ENST00000439338 FBXO33Q7Z6M2 555 aa25.52■■□□□ 1.68
UBE2F-212ENST00000439338 VPS37DQ86XT2 251 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms