RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 BRPF1P55201 1214 aaPredicted RBP23.26■■□□□ 1.31
GTF3A-204ENST00000438571 FKBP5Q13451 457 aaPredicted RBP23.26■■□□□ 1.31
GTF3A-204ENST00000438571 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
GTF3A-204ENST00000438571 CDCA5Q96FF9 252 aa23.26■■□□□ 1.31
GTF3A-204ENST00000438571 VAMP4O75379 141 aa23.25■■□□□ 1.31
GTF3A-204ENST00000438571 EXOSC9Q06265 439 aaKnown RBP23.25■■□□□ 1.31
GTF3A-204ENST00000438571 SCARF1Q14162 830 aa23.25■■□□□ 1.31
GTF3A-204ENST00000438571 USP17L3A6NCW0 530 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 USP17L4A6NCW7 530 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 ITGA6P23229 1130 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 RGMBQ6NW40 437 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 USP17L1Q7RTZ2 530 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 SULF1Q8IWU6 871 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 PLA2G12BQ9BX93 195 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 MYOZ2Q9NPC6 264 aa23.24■■□□□ 1.31
GTF3A-204ENST00000438571 USP17L8P0C7I0 530 aa23.23■■□□□ 1.31
GTF3A-204ENST00000438571 NOGQ13253 232 aa23.23■■□□□ 1.31
GTF3A-204ENST00000438571 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
GTF3A-204ENST00000438571 PODNQ7Z5L7 613 aa23.23■■□□□ 1.31
GTF3A-204ENST00000438571 F6X3S4 739 aa23.22■■□□□ 1.31
GTF3A-204ENST00000438571 ANP32CO43423 234 aa23.22■■□□□ 1.31
GTF3A-204ENST00000438571 IGHMBP2P38935 993 aaKnown RBP23.22■■□□□ 1.31
GTF3A-204ENST00000438571 DACT2Q5SW24 774 aa23.22■■□□□ 1.31
GTF3A-204ENST00000438571 C2orf69Q8N8R5 385 aa23.22■■□□□ 1.31
GTF3A-204ENST00000438571 FBXW7Q969H0 707 aa23.22■■□□□ 1.31
GTF3A-204ENST00000438571 LINS1Q8NG48 757 aa23.21■■□□□ 1.31
GTF3A-204ENST00000438571 SNAP23O00161 211 aa23.2■■□□□ 1.3
GTF3A-204ENST00000438571 CSF1RP07333 972 aa23.2■■□□□ 1.3
GTF3A-204ENST00000438571 WDR63Q8IWG1 891 aa23.2■■□□□ 1.3
GTF3A-204ENST00000438571 MYH16Q9H6N6 1097 aa23.2■■□□□ 1.3
GTF3A-204ENST00000438571 ZNF804BA4D1E1 1349 aa23.19■■□□□ 1.3
GTF3A-204ENST00000438571 ZNF316A6NFI3 1004 aaPredicted RBP23.19■■□□□ 1.3
GTF3A-204ENST00000438571 ZNF157P51786 506 aaPredicted RBP23.19■■□□□ 1.3
GTF3A-204ENST00000438571 NBPF9Q3BBW0 867 aa23.19■■□□□ 1.3
GTF3A-204ENST00000438571 MOB2Q70IA6 237 aa23.19■■□□□ 1.3
GTF3A-204ENST00000438571 CA12O43570 354 aa23.18■■□□□ 1.3
GTF3A-204ENST00000438571 SLC10A3P09131 477 aa23.18■■□□□ 1.3
GTF3A-204ENST00000438571 KIF23Q02241 960 aaPredicted RBP23.18■■□□□ 1.3
GTF3A-204ENST00000438571 CHRNDQ07001 517 aa23.18■■□□□ 1.3
GTF3A-204ENST00000438571 PRAMEF18Q5VWM3 479 aa23.18■■□□□ 1.3
GTF3A-204ENST00000438571 COA1Q9GZY4 146 aa23.18■■□□□ 1.3
GTF3A-204ENST00000438571 LEMD3Q9Y2U8 911 aa23.18■■□□□ 1.3
GTF3A-204ENST00000438571 ARAP2Q8WZ64 1704 aa23.17■■□□□ 1.3
GTF3A-204ENST00000438571 PITPNM2Q9BZ72 1349 aa23.17■■□□□ 1.3
GTF3A-204ENST00000438571 IRS2Q9Y4H2 1338 aa23.17■■□□□ 1.3
GTF3A-204ENST00000438571 FOXO4P98177 505 aa23.17■■□□□ 1.3
GTF3A-204ENST00000438571 MPHOSPH8Q99549 860 aa23.17■■□□□ 1.3
GTF3A-204ENST00000438571 SASH1O94885 1247 aa23.16■■□□□ 1.3
GTF3A-204ENST00000438571 EPHA10Q5JZY3 1008 aa23.16■■□□□ 1.3
GTF3A-204ENST00000438571 BEND3Q5T5X7 828 aa23.16■■□□□ 1.3
GTF3A-204ENST00000438571 RASAL3Q86YV0 1011 aa23.16■■□□□ 1.3
GTF3A-204ENST00000438571 WNT10BO00744 389 aa23.15■■□□□ 1.3
GTF3A-204ENST00000438571 TAF5LO75529 589 aa23.15■■□□□ 1.3
GTF3A-204ENST00000438571 STRIP1Q5VSL9 837 aa23.15■■□□□ 1.3
GTF3A-204ENST00000438571 FAM9BQ8IZU0 186 aa23.15■■□□□ 1.3
GTF3A-204ENST00000438571 HELBQ8NG08 1087 aaPredicted RBP23.15■■□□□ 1.3
GTF3A-204ENST00000438571 MCOLN1Q9GZU1 580 aa23.15■■□□□ 1.3
GTF3A-204ENST00000438571 ANKRD18BA2A2Z9 1011 aa23.14■■□□□ 1.29
GTF3A-204ENST00000438571 CCDC102AQ96A19 550 aa23.14■■□□□ 1.29
GTF3A-204ENST00000438571 ANKRD2Q9GZV1 360 aa23.14■■□□□ 1.29
GTF3A-204ENST00000438571 CCDC85CA6NKD9 419 aa23.13■■□□□ 1.29
GTF3A-204ENST00000438571 GTF2IP78347 998 aa23.13■■□□□ 1.29
GTF3A-204ENST00000438571 KIAA0825Q8IV33 1275 aa23.13■■□□□ 1.29
GTF3A-204ENST00000438571 CHMP3Q9Y3E7 222 aa23.13■■□□□ 1.29
GTF3A-204ENST00000438571 MYO3BQ8WXR4 1341 aa23.12■■□□□ 1.29
GTF3A-204ENST00000438571 LAMB1P07942 1786 aa23.12■■□□□ 1.29
GTF3A-204ENST00000438571 TTLL5Q6EMB2 1281 aa23.12■■□□□ 1.29
GTF3A-204ENST00000438571 ZNF594Q96JF6 807 aaPredicted RBP23.12■■□□□ 1.29
GTF3A-204ENST00000438571 CSRNP1Q96S65 589 aa23.12■■□□□ 1.29
GTF3A-204ENST00000438571 RNF186Q9NXI6 227 aa23.12■■□□□ 1.29
GTF3A-204ENST00000438571 OTOFQ9HC10 1997 aa23.11■■□□□ 1.29
GTF3A-204ENST00000438571 ZEB1P37275 1124 aaPredicted RBP23.11■■□□□ 1.29
GTF3A-204ENST00000438571 KCNJ4P48050 445 aa23.11■■□□□ 1.29
GTF3A-204ENST00000438571 DGKZQ13574 1117 aa23.11■■□□□ 1.29
GTF3A-204ENST00000438571 CD209Q9NNX6 404 aa23.11■■□□□ 1.29
GTF3A-204ENST00000438571 UBE2Q2LH0YL09 131 aa23.1■■□□□ 1.29
GTF3A-204ENST00000438571 TRPA1O75762 1119 aa23.1■■□□□ 1.29
GTF3A-204ENST00000438571 LMBR1LQ6UX01 489 aa23.1■■□□□ 1.29
GTF3A-204ENST00000438571 CERS5Q8N5B7 392 aa23.1■■□□□ 1.29
GTF3A-204ENST00000438571 PCDHAC2Q9Y5I4 1007 aa23.1■■□□□ 1.29
GTF3A-204ENST00000438571 IFIT5Q13325 482 aaKnown RBP23.09■■□□□ 1.29
GTF3A-204ENST00000438571 OGFOD1Q8N543 542 aa23.09■■□□□ 1.29
GTF3A-204ENST00000438571 SAGE1Q9NXZ1 904 aa23.09■■□□□ 1.29
GTF3A-204ENST00000438571 MYH13Q9UKX3 1938 aa23.09■■□□□ 1.29
GTF3A-204ENST00000438571 GRM8O00222 908 aa23.08■■□□□ 1.29
GTF3A-204ENST00000438571 FKBP1BP68106 108 aa23.08■■□□□ 1.29
GTF3A-204ENST00000438571 ZBED3Q96IU2 234 aaPredicted RBP23.08■■□□□ 1.29
GTF3A-204ENST00000438571 JAG2Q9Y219 1238 aa23.08■■□□□ 1.29
GTF3A-204ENST00000438571 SLC4A10Q6U841 1118 aa23.07■■□□□ 1.28
GTF3A-204ENST00000438571 FZD1Q9UP38 647 aa23.07■■□□□ 1.28
GTF3A-204ENST00000438571 ZNF521Q96K83 1311 aa23.07■■□□□ 1.28
GTF3A-204ENST00000438571 SSC5DA1L4H1 1573 aa23.06■■□□□ 1.28
GTF3A-204ENST00000438571 AOX1Q06278 1338 aa23.06■■□□□ 1.28
GTF3A-204ENST00000438571 PLIN1O60240 522 aa23.05■■□□□ 1.28
GTF3A-204ENST00000438571 PRKG1Q13976 671 aa23.05■■□□□ 1.28
GTF3A-204ENST00000438571 TTLL12Q14166 644 aaPredicted RBP23.05■■□□□ 1.28
GTF3A-204ENST00000438571 C15orf52Q6ZUT6 534 aaKnown RBP23.05■■□□□ 1.28
GTF3A-204ENST00000438571 KAZALD1Q96I82 304 aa23.05■■□□□ 1.28
GTF3A-204ENST00000438571 SUCLG2Q96I99 432 aa23.05■■□□□ 1.28
GTF3A-204ENST00000438571 F8W031 263 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms