RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 NFKBIEO00221 500 aa22.61■■□□□ 1.21
HDAC6-208ENST00000438518 ZBTB22O15209 634 aa22.61■■□□□ 1.21
HDAC6-208ENST00000438518 KIAA2012Q0VF49 1180 aa22.61■■□□□ 1.21
HDAC6-208ENST00000438518 WASHC4Q2M389 1173 aa22.61■■□□□ 1.21
HDAC6-208ENST00000438518 CAVIN4Q5BKX8 364 aa22.61■■□□□ 1.21
HDAC6-208ENST00000438518 IL1RAPL2Q9NP60 686 aa22.61■■□□□ 1.21
HDAC6-208ENST00000438518 IFIT2P09913 472 aaKnown RBP22.6■■□□□ 1.21
HDAC6-208ENST00000438518 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
HDAC6-208ENST00000438518 ARHGAP27Q6ZUM4 889 aa22.6■■□□□ 1.21
HDAC6-208ENST00000438518 SLC51AQ86UW1 340 aa22.6■■□□□ 1.21
HDAC6-208ENST00000438518 CHD1LQ86WJ1 897 aa22.6■■□□□ 1.21
HDAC6-208ENST00000438518 SBF1O95248 1867 aa22.6■■□□□ 1.21
HDAC6-208ENST00000438518 IRS2Q9Y4H2 1338 aa22.59■■□□□ 1.21
HDAC6-208ENST00000438518 IARSP41252 1262 aaKnown RBP22.59■■□□□ 1.21
HDAC6-208ENST00000438518 ZNF804AQ7Z570 1209 aa22.59■■□□□ 1.21
HDAC6-208ENST00000438518 AACSQ86V21 672 aa22.59■■□□□ 1.21
HDAC6-208ENST00000438518 EAF2Q96CJ1 260 aaPredicted RBP22.59■■□□□ 1.21
HDAC6-208ENST00000438518 NEUROD6Q96NK8 337 aa22.59■■□□□ 1.21
HDAC6-208ENST00000438518 CCDC88AQ3V6T2 1871 aa22.59■■□□□ 1.21
HDAC6-208ENST00000438518 TIMM10P62072 90 aa22.58■■□□□ 1.21
HDAC6-208ENST00000438518 XAGE2Q96GT9 111 aa22.58■■□□□ 1.21
HDAC6-208ENST00000438518 COA1Q9GZY4 146 aa22.58■■□□□ 1.21
HDAC6-208ENST00000438518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.58■■□□□ 1.21
HDAC6-208ENST00000438518 MYH13Q9UKX3 1938 aa22.58■■□□□ 1.21
HDAC6-208ENST00000438518 PPIP5K2O43314 1243 aa22.57■■□□□ 1.2
HDAC6-208ENST00000438518 LMNB1P20700 586 aa22.57■■□□□ 1.2
HDAC6-208ENST00000438518 SNAP23O00161 211 aa22.56■■□□□ 1.2
HDAC6-208ENST00000438518 SMARCA5O60264 1052 aaPredicted RBP22.56■■□□□ 1.2
HDAC6-208ENST00000438518 HIBADHP31937 336 aaKnown RBP22.56■■□□□ 1.2
HDAC6-208ENST00000438518 CCDC158Q5M9N0 1113 aa22.56■■□□□ 1.2
HDAC6-208ENST00000438518 GORABQ5T7V8 394 aa22.56■■□□□ 1.2
HDAC6-208ENST00000438518 VPS37DQ86XT2 251 aa22.56■■□□□ 1.2
HDAC6-208ENST00000438518 GPATCH3Q96I76 525 aa22.56■■□□□ 1.2
HDAC6-208ENST00000438518 GNL3LQ9NVN8 582 aaKnown RBP22.56■■□□□ 1.2
HDAC6-208ENST00000438518 DBNLQ9UJU6 430 aaKnown RBP22.56■■□□□ 1.2
HDAC6-208ENST00000438518 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
HDAC6-208ENST00000438518 G3V3G9 751 aa22.55■■□□□ 1.2
HDAC6-208ENST00000438518 DCAF8Q5TAQ9 597 aa22.55■■□□□ 1.2
HDAC6-208ENST00000438518 PODNQ7Z5L7 613 aa22.55■■□□□ 1.2
HDAC6-208ENST00000438518 FBXO33Q7Z6M2 555 aa22.55■■□□□ 1.2
HDAC6-208ENST00000438518 LARGE2Q8N3Y3 721 aa22.55■■□□□ 1.2
HDAC6-208ENST00000438518 ZNF512BQ96KM6 892 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-208ENST00000438518 FAM84BQ96KN1 310 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-208ENST00000438518 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-208ENST00000438518 CHD4Q14839 1912 aa22.55■■□□□ 1.2
HDAC6-208ENST00000438518 PSME4Q14997 1843 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 SEMA3EO15041 775 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 UQCRFS1P1P0C7P4 283 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 RASSF7Q02833 373 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 AOC3Q16853 763 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 JDP2Q8WYK2 163 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 DBNDD2Q9BQY9 259 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 LNPKQ9C0E8 428 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 CCDC8Q9H0W5 538 aaPredicted RBP22.54■■□□□ 1.2
HDAC6-208ENST00000438518 TTC41PQ6P2S7 1318 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 TIAM2Q8IVF5 1701 aa22.54■■□□□ 1.2
HDAC6-208ENST00000438518 WTIPA6NIX2 430 aaPredicted RBP22.53■■□□□ 1.2
HDAC6-208ENST00000438518 RIMBP2O15034 1052 aa22.53■■□□□ 1.2
HDAC6-208ENST00000438518 IL1R1P14778 569 aa22.53■■□□□ 1.2
HDAC6-208ENST00000438518 KLRK1P26718 216 aa22.53■■□□□ 1.2
HDAC6-208ENST00000438518 CCDC102BQ68D86 513 aa22.53■■□□□ 1.2
HDAC6-208ENST00000438518 TXNRD3Q86VQ6 643 aa22.53■■□□□ 1.2
HDAC6-208ENST00000438518 NIM1KQ8IY84 436 aa22.53■■□□□ 1.2
HDAC6-208ENST00000438518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.53■■□□□ 1.2
HDAC6-208ENST00000438518 ZC3H4Q9UPT8 1303 aaKnown RBP22.53■■□□□ 1.2
HDAC6-208ENST00000438518 ADORA1P30542 326 aa22.52■■□□□ 1.2
HDAC6-208ENST00000438518 GYG1P46976 350 aa22.52■■□□□ 1.2
HDAC6-208ENST00000438518 GPR101Q96P66 508 aaPredicted RBP22.52■■□□□ 1.2
HDAC6-208ENST00000438518 CD209Q9NNX6 404 aa22.52■■□□□ 1.2
HDAC6-208ENST00000438518 PDS5AQ29RF7 1337 aaKnown RBP22.52■■□□□ 1.2
HDAC6-208ENST00000438518 SALL3Q9BXA9 1300 aa22.52■■□□□ 1.2
HDAC6-208ENST00000438518 MX1P20591 662 aa22.51■■□□□ 1.19
HDAC6-208ENST00000438518 ARID4AP29374 1257 aaPredicted RBP22.51■■□□□ 1.19
HDAC6-208ENST00000438518 TTC39AQ5SRH9 613 aa22.51■■□□□ 1.19
HDAC6-208ENST00000438518 ECHDC1Q9NTX5 307 aa22.51■■□□□ 1.19
HDAC6-208ENST00000438518 TLR7Q9NYK1 1049 aaKnown RBP22.51■■□□□ 1.19
HDAC6-208ENST00000438518 AOX1Q06278 1338 aa22.51■■□□□ 1.19
HDAC6-208ENST00000438518 ERC2O15083 957 aa22.5■■□□□ 1.19
HDAC6-208ENST00000438518 ECE2O60344 883 aa22.5■■□□□ 1.19
HDAC6-208ENST00000438518 BCAMP50895 628 aa22.5■■□□□ 1.19
HDAC6-208ENST00000438518 TDRD7Q8NHU6 1098 aaKnown RBP22.5■■□□□ 1.19
HDAC6-208ENST00000438518 PHKA1P46020 1223 aa22.49■■□□□ 1.19
HDAC6-208ENST00000438518 STAP2Q9UGK3 403 aa22.49■■□□□ 1.19
HDAC6-208ENST00000438518 DENND2AQ9ULE3 1009 aa22.49■■□□□ 1.19
HDAC6-208ENST00000438518 ZNRF3Q9ULT6 936 aa22.49■■□□□ 1.19
HDAC6-208ENST00000438518 COL4A5P29400 1685 aa22.49■■□□□ 1.19
HDAC6-208ENST00000438518 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
HDAC6-208ENST00000438518 ATP5JP18859 108 aa22.48■■□□□ 1.19
HDAC6-208ENST00000438518 OSBPL3Q9H4L5 887 aa22.48■■□□□ 1.19
HDAC6-208ENST00000438518 DBNDD1Q9H9R9 158 aa22.48■■□□□ 1.19
HDAC6-208ENST00000438518 ZNF646O15015 1829 aaPredicted RBP22.47■■□□□ 1.19
HDAC6-208ENST00000438518 AKAP11Q9UKA4 1901 aa22.47■■□□□ 1.19
HDAC6-208ENST00000438518 IGSF3O75054 1194 aa22.47■■□□□ 1.19
HDAC6-208ENST00000438518 PRELPP51888 382 aa22.47■■□□□ 1.19
HDAC6-208ENST00000438518 DOK7Q18PE1 504 aa22.47■■□□□ 1.19
HDAC6-208ENST00000438518 RNF181Q9P0P0 153 aa22.47■■□□□ 1.19
HDAC6-208ENST00000438518 FZD9O00144 591 aa22.46■■□□□ 1.19
HDAC6-208ENST00000438518 GLRX3O76003 335 aaKnown RBP22.46■■□□□ 1.19
HDAC6-208ENST00000438518 PDE1AP54750 535 aa22.46■■□□□ 1.19
HDAC6-208ENST00000438518 C16orf71Q8IYS4 520 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms