RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 IMPACTQ9P2X3 320 aa17.3■□□□□ 0.36
DDX56-205ENST00000433257 BCL9O00512 1426 aa17.3■□□□□ 0.36
DDX56-205ENST00000433257 TAF5LO75529 589 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
DDX56-205ENST00000433257 CAMK4Q16566 473 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 FERMT3Q86UX7 667 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 SMARCC2Q8TAQ2 1214 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 SYTL4Q96C24 671 aaPredicted RBP17.29■□□□□ 0.36
DDX56-205ENST00000433257 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 KCNJ6P48051 423 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 CBX1P83916 185 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 CKAP2LQ8IYA6 745 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
DDX56-205ENST00000433257 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
DDX56-205ENST00000433257 BECN2A8MW95 431 aa17.28■□□□□ 0.36
DDX56-205ENST00000433257 PFKFB2O60825 505 aa17.28■□□□□ 0.36
DDX56-205ENST00000433257 TPM4P67936 248 aa17.28■□□□□ 0.36
DDX56-205ENST00000433257 SLFNL1Q499Z3 407 aa17.28■□□□□ 0.36
DDX56-205ENST00000433257 CEP57L1Q8IYX8 460 aa17.28■□□□□ 0.36
DDX56-205ENST00000433257 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
DDX56-205ENST00000433257 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
DDX56-205ENST00000433257 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
DDX56-205ENST00000433257 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.36
DDX56-205ENST00000433257 CCP110O43303 1012 aa17.27■□□□□ 0.36
DDX56-205ENST00000433257 KINO60870 393 aaKnown RBP17.27■□□□□ 0.36
DDX56-205ENST00000433257 HSP90B1P14625 803 aaKnown RBP17.27■□□□□ 0.36
DDX56-205ENST00000433257 NCBP1Q09161 790 aaKnown RBP17.27■□□□□ 0.36
DDX56-205ENST00000433257 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
DDX56-205ENST00000433257 LRRC8AQ8IWT6 810 aa17.27■□□□□ 0.36
DDX56-205ENST00000433257 BRF1Q92994 677 aa17.27■□□□□ 0.36
DDX56-205ENST00000433257 PA2G4Q9UQ80 394 aaKnown RBP17.27■□□□□ 0.36
DDX56-205ENST00000433257 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 KCNQ2O43526 872 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 NR1I2O75469 434 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 APBA3O96018 575 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 IQCB1Q15051 598 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 PTPN14Q15678 1187 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 MCMDC2Q4G0Z9 681 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 PGBD1Q96JS3 809 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 BPIFA3Q9BQP9 254 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 DNAJC25Q9H1X3 360 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 KAT6BQ8WYB5 2073 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 SPEF2Q9C093 1822 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 ZNF397Q8NF99 534 aaPredicted RBP17.26■□□□□ 0.35
DDX56-205ENST00000433257 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
DDX56-205ENST00000433257 C16orf45Q96MC5 204 aaPredicted RBP17.26■□□□□ 0.35
DDX56-205ENST00000433257 TFIP11Q9UBB9 837 aaKnown RBP17.26■□□□□ 0.35
DDX56-205ENST00000433257 FAM160A1Q05DH4 1040 aa17.25■□□□□ 0.35
DDX56-205ENST00000433257 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
DDX56-205ENST00000433257 RIC3Q7Z5B4 369 aa17.25■□□□□ 0.35
DDX56-205ENST00000433257 CCDC150Q8NCX0 1101 aa17.25■□□□□ 0.35
DDX56-205ENST00000433257 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
DDX56-205ENST00000433257 HELLSQ9NRZ9 838 aa17.25■□□□□ 0.35
DDX56-205ENST00000433257 CTNNA3Q9UI47 895 aa17.25■□□□□ 0.35
DDX56-205ENST00000433257 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
DDX56-205ENST00000433257 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 ERVV-2B6SEH9 535 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 BAG6P46379 1132 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 FGD1P98174 961 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 ZRSR1Q15695 479 aaKnown RBP17.24■□□□□ 0.35
DDX56-205ENST00000433257 Q6ZUG5 572 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
DDX56-205ENST00000433257 KIF18AQ8NI77 898 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 DSCC1Q9BVC3 393 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 DDX41Q9UJV9 622 aaKnown RBP17.24■□□□□ 0.35
DDX56-205ENST00000433257 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 SHANK3Q9BYB0 1731 aa17.24■□□□□ 0.35
DDX56-205ENST00000433257 A0A1W2PQ27 194 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 A0A1W2PQ64 194 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 A0A1W2PQD8 194 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 CWF19L2Q2TBE0 894 aaKnown RBP17.23■□□□□ 0.35
DDX56-205ENST00000433257 CCAR1Q8IX12 1150 aaKnown RBP17.23■□□□□ 0.35
DDX56-205ENST00000433257 FBXL16Q8N461 479 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
DDX56-205ENST00000433257 ARID3AQ99856 593 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 CABP4P57796 275 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 TNNI3KQ59H18 835 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 NYAP1Q6ZVC0 841 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 TSC1Q92574 1164 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 ZNF274Q96GC6 653 aaPredicted RBP17.23■□□□□ 0.35
DDX56-205ENST00000433257 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 HAUS7Q99871 368 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
DDX56-205ENST00000433257 AGXT2Q9BYV1 514 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 TMOD3Q9NYL9 352 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 FPGT-TNNI3KV9GXZ4 949 aa17.23■□□□□ 0.35
DDX56-205ENST00000433257 NEURL1BA8MQ27 555 aa17.22■□□□□ 0.35
DDX56-205ENST00000433257 KCNQ3O43525 872 aa17.22■□□□□ 0.35
DDX56-205ENST00000433257 MYO1BO43795 1136 aa17.22■□□□□ 0.35
DDX56-205ENST00000433257 GCKRQ14397 625 aa17.22■□□□□ 0.35
DDX56-205ENST00000433257 PTF1AQ7RTS3 328 aa17.22■□□□□ 0.35
DDX56-205ENST00000433257 OSBPL5Q9H0X9 879 aaPredicted RBP17.22■□□□□ 0.35
DDX56-205ENST00000433257 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
DDX56-205ENST00000433257 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms