RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PGAP2Q9UHJ9 254 aa12.31□□□□□ -0.44
HDAC6-207ENST00000430858 MROH5Q6ZUA9 1318 aa12.31□□□□□ -0.44
HDAC6-207ENST00000430858 SPEF2Q9C093 1822 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 SHTN1A0MZ66 631 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 TRIM27P14373 513 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 KLRK1P26718 216 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 HIRAP54198 1017 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-207ENST00000430858 STRIP1Q5VSL9 837 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 TRPM4Q8TD43 1214 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 FRAT1Q92837 279 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-207ENST00000430858 KLRG1Q96E93 195 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 CD209Q9NNX6 404 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
HDAC6-207ENST00000430858 TMEM88BA6NKF7 163 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 SNAP23O00161 211 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 PLIN1O60240 522 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 GNAI3P08754 354 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 GMLQ99445 158 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 PUS3Q9BZE2 481 aaKnown RBP12.29□□□□□ -0.44
HDAC6-207ENST00000430858 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 IRS2Q9Y4H2 1338 aa12.29□□□□□ -0.44
HDAC6-207ENST00000430858 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 MMP14P50281 582 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 ZNF280AP59817 542 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-207ENST00000430858 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-207ENST00000430858 LRRC24Q50LG9 513 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 TTLL5Q6EMB2 1281 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 ZNF804AQ7Z570 1209 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 MEIS3Q99687 375 aa12.28□□□□□ -0.44
HDAC6-207ENST00000430858 SCN9AQ15858 1988 aa12.27□□□□□ -0.44
HDAC6-207ENST00000430858 EGFRP00533 1210 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 IL1R1P14778 569 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-207ENST00000430858 METTL24Q5JXM2 366 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
HDAC6-207ENST00000430858 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 FBXW7Q969H0 707 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
HDAC6-207ENST00000430858 LRRFIP2Q9Y608 721 aaKnown RBP12.27□□□□□ -0.45
HDAC6-207ENST00000430858 EYA2O00167 538 aa12.26□□□□□ -0.45
HDAC6-207ENST00000430858 PDE8BO95263 885 aa12.26□□□□□ -0.45
HDAC6-207ENST00000430858 GTF2IP78347 998 aa12.26□□□□□ -0.45
HDAC6-207ENST00000430858 PTPN12Q05209 780 aaKnown RBP12.26□□□□□ -0.45
HDAC6-207ENST00000430858 OGFOD1Q8N543 542 aa12.26□□□□□ -0.45
HDAC6-207ENST00000430858 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
HDAC6-207ENST00000430858 JMYQ8N9B5 988 aa12.26□□□□□ -0.45
HDAC6-207ENST00000430858 TRAF5O00463 557 aa12.25□□□□□ -0.45
HDAC6-207ENST00000430858 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
HDAC6-207ENST00000430858 DCPSQ96C86 337 aaKnown RBP12.25□□□□□ -0.45
HDAC6-207ENST00000430858 MXD3Q9BW11 206 aa12.25□□□□□ -0.45
HDAC6-207ENST00000430858 GLIS2Q9BZE0 524 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-207ENST00000430858 MYOZ2Q9NPC6 264 aa12.25□□□□□ -0.45
HDAC6-207ENST00000430858 TNNQ9UQP3 1299 aa12.25□□□□□ -0.45
HDAC6-207ENST00000430858 CEP350Q5VT06 3117 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 CIAO1O76071 339 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 SASH1O94885 1247 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 GNAI2P04899 355 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 FKBP1AP62942 108 aaKnown RBP12.24□□□□□ -0.45
HDAC6-207ENST00000430858 CNTNAP1P78357 1384 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 FMR1Q06787 632 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC6-207ENST00000430858 PSME4Q14997 1843 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 PUM3Q15397 648 aaKnown RBP12.24□□□□□ -0.45
HDAC6-207ENST00000430858 CAVIN4Q5BKX8 364 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 CST9Q5W186 159 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 FTSJ3Q8IY81 847 aaKnown RBP12.24□□□□□ -0.45
HDAC6-207ENST00000430858 TMEM57Q8N5G2 664 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
HDAC6-207ENST00000430858 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-207ENST00000430858 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
HDAC6-207ENST00000430858 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
HDAC6-207ENST00000430858 IFIT1P09914 478 aaKnown RBP12.23□□□□□ -0.45
HDAC6-207ENST00000430858 FGFR2P21802 821 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 GYG1P46976 350 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 MTX1Q13505 466 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 SCARF1Q14162 830 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 FBXO33Q7Z6M2 555 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 USP48Q86UV5 1035 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 KIAA0825Q8IV33 1275 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
HDAC6-207ENST00000430858 COPRSQ9NQ92 184 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 GGA3Q9NZ52 723 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 ABT1Q9ULW3 272 aaKnown RBP12.23□□□□□ -0.45
HDAC6-207ENST00000430858 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
HDAC6-207ENST00000430858 FAM205AQ6ZU69 1335 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 RASSF10A6NK89 507 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 SRGAP3O43295 1099 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 CELF2O95319 508 aaKnown RBP12.22□□□□□ -0.45
HDAC6-207ENST00000430858 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms