RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 FSIP1Q8NA03 581 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 PIBF1Q8WXW3 757 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 CHMP4CQ96CF2 233 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 RNF216Q9NWF9 866 aaPredicted RBP9.44□□□□□ -0.9
HPS4-205ENST00000429411 LRP6O75581 1613 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 USP31Q70CQ4 1352 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 CHD2O14647 1828 aaKnown RBP9.44□□□□□ -0.9
HPS4-205ENST00000429411 TNNT1P13805 278 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 RXRAP19793 462 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 GPTP24298 496 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 GCKRQ14397 625 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 KRT32Q14532 448 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 TTC39AQ5SRH9 613 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 NFXL1Q6ZNB6 911 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 PDCL2Q8N4E4 241 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 LEO1Q8WVC0 666 aaPredicted RBP9.44□□□□□ -0.9
HPS4-205ENST00000429411 DBNLQ9UJU6 430 aaKnown RBP9.44□□□□□ -0.9
HPS4-205ENST00000429411 CFAP45Q9UL16 551 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 NECTIN1Q15223 517 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 TNNI3KQ59H18 835 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 RRP12Q5JTH9 1297 aaKnown RBP9.44□□□□□ -0.9
HPS4-205ENST00000429411 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 FPGT-TNNI3KV9GXZ4 949 aa9.44□□□□□ -0.9
HPS4-205ENST00000429411 NEURL1BA8MQ27 555 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 FNBP4Q8N3X1 1017 aaPredicted RBP9.43□□□□□ -0.9
HPS4-205ENST00000429411 MAP4K1Q92918 833 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 ZBTB9Q96C00 473 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 KDRP35968 1356 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 SOCS7O14512 581 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 RIOK3O14730 519 aaKnown RBP9.43□□□□□ -0.9
HPS4-205ENST00000429411 IGKV5-2P06315 115 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 IL2RBP14784 551 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 CCDC57Q2TAC2 916 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 MCMDC2Q4G0Z9 681 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 PTPDC1A2A3K4 754 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 IDH1O75874 414 aaKnown RBP9.43□□□□□ -0.9
HPS4-205ENST00000429411 SNRPA1P09661 255 aaKnown RBP9.43□□□□□ -0.9
HPS4-205ENST00000429411 TRDNQ13061 729 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 SMIM5Q71RC9 77 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 CCDC112Q8NEF3 446 aa9.43□□□□□ -0.9
HPS4-205ENST00000429411 DDX19AQ9NUU7 478 aaKnown RBP9.43□□□□□ -0.9
HPS4-205ENST00000429411 U3KPZ7 1027 aaPredicted RBP9.43□□□□□ -0.9
HPS4-205ENST00000429411 ANKRD26Q9UPS8 1709 aa9.42□□□□□ -0.9
HPS4-205ENST00000429411 NRDCO43847 1150 aa9.42□□□□□ -0.9
HPS4-205ENST00000429411 A1BGP04217 495 aa9.42□□□□□ -0.9
HPS4-205ENST00000429411 IFNL2Q8IZJ0 200 aa9.42□□□□□ -0.9
HPS4-205ENST00000429411 A0A1B0GVL5 298 aa9.42□□□□□ -0.9
HPS4-205ENST00000429411 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
HPS4-205ENST00000429411 PRDM4Q9UKN5 801 aa9.42□□□□□ -0.9
HPS4-205ENST00000429411 CYP21A2P08686 494 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 HOXB7P09629 217 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 VPS72Q15906 364 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 CCDC158Q5M9N0 1113 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 CCAR2Q8N163 923 aaKnown RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 TMX1Q9H3N1 280 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 BABAM1Q9NWV8 329 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 TCHHQ07283 1943 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 ANKARQ7Z5J8 1434 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 GOLGA8BA8MQT2 603 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 TAF5LO75529 589 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 MARCKSP29966 332 aaPredicted RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 AOPEPQ8N6M6 819 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 ZNF396Q96N95 335 aaPredicted RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 METTL22Q9BUU2 404 aaPredicted RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 PAG1Q9NWQ8 432 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 HMG20BQ9P0W2 317 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 MRVI1Q9Y6F6 885 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 R3HDM1Q15032 1099 aaKnown RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 ZNF771Q7L3S4 317 aaPredicted RBP9.41□□□□□ -0.9
HPS4-205ENST00000429411 TM6SF1Q9BZW5 370 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
HPS4-205ENST00000429411 AP5Z1O43299 807 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 TPM3P06753 285 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 BAG6P46379 1132 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 TTLL7Q6ZT98 887 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 MTERF4Q7Z6M4 381 aaKnown RBP9.4□□□□□ -0.9
HPS4-205ENST00000429411 MYRIPQ8NFW9 859 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 ZCRB1Q8TBF4 217 aaKnown RBP9.4□□□□□ -0.9
HPS4-205ENST00000429411 C8orf76Q96K31 380 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 NALCNQ8IZF0 1738 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 KLF18A0A0U1RQI7 1052 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 U2AF2P26368 475 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■□□□ 13.6
HPS4-205ENST00000429411 TPM4P67936 248 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 TOB2Q14106 344 aaPredicted RBP9.4□□□□□ -0.9
HPS4-205ENST00000429411 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 CEP57L1Q8IYX8 460 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 PDILTQ8N807 584 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 PRIMPOLQ96LW4 560 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 SLC52A2Q9HAB3 445 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 ITSN1Q15811 1721 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 ERBB3P21860 1342 aa9.4□□□□□ -0.9
HPS4-205ENST00000429411 A0A0G2JLW4 131 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms