RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SHTN1A0MZ66 631 aa27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 VIL1P09327 827 aaKnown RBP27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 RPS12P25398 132 aaKnown RBP27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 RFX5P48382 616 aaPredicted RBP27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 USP50Q70EL3 339 aaPredicted RBP27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 MICALL2Q8IY33 904 aa27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 DZIP1LQ8IYY4 767 aaKnown RBP27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 CNOT7Q9UIV1 285 aaKnown RBP27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 IRS2Q9Y4H2 1338 aa27.91■■■□□ 2.06
PTCHD3P2-201ENST00000424937 METTL24Q5JXM2 366 aa27.9■■■□□ 2.06
PTCHD3P2-201ENST00000424937 FBXW7Q969H0 707 aa27.9■■■□□ 2.06
PTCHD3P2-201ENST00000424937 USP17L3A6NCW0 530 aa27.89■■■□□ 2.06
PTCHD3P2-201ENST00000424937 USP17L4A6NCW7 530 aa27.89■■■□□ 2.06
PTCHD3P2-201ENST00000424937 APLP1P51693 650 aa27.89■■■□□ 2.06
PTCHD3P2-201ENST00000424937 C15orf52Q6ZUT6 534 aaKnown RBP27.89■■■□□ 2.06
PTCHD3P2-201ENST00000424937 USP17L1Q7RTZ2 530 aa27.89■■■□□ 2.06
PTCHD3P2-201ENST00000424937 DPF2Q92785 391 aa27.89■■■□□ 2.06
PTCHD3P2-201ENST00000424937 ZNF609O15014 1411 aa27.89■■■□□ 2.06
PTCHD3P2-201ENST00000424937 H7C1D1 291 aa27.88■■■□□ 2.05
PTCHD3P2-201ENST00000424937 RLBP1P12271 317 aa27.88■■■□□ 2.05
PTCHD3P2-201ENST00000424937 PTPN12Q05209 780 aaKnown RBP27.88■■■□□ 2.05
PTCHD3P2-201ENST00000424937 RSBN1LQ6PCB5 846 aaPredicted RBP27.88■■■□□ 2.05
PTCHD3P2-201ENST00000424937 ITPRIPQ8IWB1 547 aa27.88■■■□□ 2.05
PTCHD3P2-201ENST00000424937 TRPM4Q8TD43 1214 aa27.88■■■□□ 2.05
PTCHD3P2-201ENST00000424937 RCAN3Q9UKA8 241 aa27.88■■■□□ 2.05
PTCHD3P2-201ENST00000424937 UBE4AQ14139 1066 aa27.87■■■□□ 2.05
PTCHD3P2-201ENST00000424937 MAP1SQ66K74 1059 aaPredicted RBP27.87■■■□□ 2.05
PTCHD3P2-201ENST00000424937 ZNF804AQ7Z570 1209 aa27.87■■■□□ 2.05
PTCHD3P2-201ENST00000424937 MYH13Q9UKX3 1938 aa27.86■■■□□ 2.05
PTCHD3P2-201ENST00000424937 EYA2O00167 538 aa27.86■■■□□ 2.05
PTCHD3P2-201ENST00000424937 SIL1Q9H173 461 aa27.86■■■□□ 2.05
PTCHD3P2-201ENST00000424937 TRPM7Q96QT4 1865 aa27.85■■■□□ 2.05
PTCHD3P2-201ENST00000424937 GNAI2P04899 355 aa27.85■■■□□ 2.05
PTCHD3P2-201ENST00000424937 AGBL3Q8NEM8 1001 aa27.85■■■□□ 2.05
PTCHD3P2-201ENST00000424937 YTHDC1Q96MU7 727 aaKnown RBP27.85■■■□□ 2.05
PTCHD3P2-201ENST00000424937 CD209Q9NNX6 404 aa27.85■■■□□ 2.05
PTCHD3P2-201ENST00000424937 POLR2AP24928 1970 aaKnown RBP27.85■■■□□ 2.05
PTCHD3P2-201ENST00000424937 STRIP1Q5VSL9 837 aa27.84■■■□□ 2.05
PTCHD3P2-201ENST00000424937 VGLL2Q8N8G2 317 aa27.84■■■□□ 2.05
PTCHD3P2-201ENST00000424937 ARAP2Q8WZ64 1704 aa27.84■■■□□ 2.05
PTCHD3P2-201ENST00000424937 SRGAP3O43295 1099 aa27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 PDE8BO95263 885 aa27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 TBC1D10BQ4KMP7 808 aaPredicted RBP27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 DACT2Q5SW24 774 aa27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 SAMD7Q7Z3H4 446 aa27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 CNTROBQ8N137 903 aa27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 MXD3Q9BW11 206 aa27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 PA2G4Q9UQ80 394 aaKnown RBP27.83■■■□□ 2.05
PTCHD3P2-201ENST00000424937 HIRAP54198 1017 aaPredicted RBP27.82■■■□□ 2.04
PTCHD3P2-201ENST00000424937 GTF2IP78347 998 aa27.82■■■□□ 2.04
PTCHD3P2-201ENST00000424937 HTRA3P83110 453 aa27.82■■■□□ 2.04
PTCHD3P2-201ENST00000424937 TTLL5Q6EMB2 1281 aa27.82■■■□□ 2.04
PTCHD3P2-201ENST00000424937 PANK1Q8TE04 598 aa27.82■■■□□ 2.04
PTCHD3P2-201ENST00000424937 EGFRP00533 1210 aa27.81■■■□□ 2.04
PTCHD3P2-201ENST00000424937 MTX1Q13505 466 aa27.81■■■□□ 2.04
PTCHD3P2-201ENST00000424937 RBM26Q5T8P6 1007 aaKnown RBP27.81■■■□□ 2.04
PTCHD3P2-201ENST00000424937 ATG9AQ7Z3C6 839 aa27.81■■■□□ 2.04
PTCHD3P2-201ENST00000424937 GMLQ99445 158 aa27.81■■■□□ 2.04
PTCHD3P2-201ENST00000424937 FBXO3Q9UK99 471 aa27.81■■■□□ 2.04
PTCHD3P2-201ENST00000424937 PASKQ96RG2 1323 aa27.81■■■□□ 2.04
PTCHD3P2-201ENST00000424937 CIAO1O76071 339 aa27.8■■■□□ 2.04
PTCHD3P2-201ENST00000424937 ITGBL1O95965 494 aaPredicted RBP27.8■■■□□ 2.04
PTCHD3P2-201ENST00000424937 IL1R1P14778 569 aa27.8■■■□□ 2.04
PTCHD3P2-201ENST00000424937 GYG1P46976 350 aa27.8■■■□□ 2.04
PTCHD3P2-201ENST00000424937 MYO3BQ8WXR4 1341 aa27.8■■■□□ 2.04
PTCHD3P2-201ENST00000424937 CEP350Q5VT06 3117 aa27.8■■■□□ 2.04
PTCHD3P2-201ENST00000424937 PUM3Q15397 648 aaKnown RBP27.79■■■□□ 2.04
PTCHD3P2-201ENST00000424937 KIF4BQ2VIQ3 1234 aa27.79■■■□□ 2.04
PTCHD3P2-201ENST00000424937 COPRSQ9NQ92 184 aa27.79■■■□□ 2.04
PTCHD3P2-201ENST00000424937 USP17L8P0C7I0 530 aa27.78■■■□□ 2.04
PTCHD3P2-201ENST00000424937 MS4A1P11836 297 aa27.78■■■□□ 2.04
PTCHD3P2-201ENST00000424937 HIBADHP31937 336 aaKnown RBP27.78■■■□□ 2.04
PTCHD3P2-201ENST00000424937 C1orf115Q9H7X2 142 aa27.78■■■□□ 2.04
PTCHD3P2-201ENST00000424937 ZNF280AP59817 542 aaPredicted RBP27.77■■■□□ 2.04
PTCHD3P2-201ENST00000424937 ZC3H15Q8WU90 426 aaKnown RBP27.77■■■□□ 2.04
PTCHD3P2-201ENST00000424937 FAM84BQ96KN1 310 aaPredicted RBP27.77■■■□□ 2.04
PTCHD3P2-201ENST00000424937 PNMA6EA0A0J9YXQ4 647 aa27.76■■■□□ 2.03
PTCHD3P2-201ENST00000424937 IFIT1P09914 478 aaKnown RBP27.76■■■□□ 2.03
PTCHD3P2-201ENST00000424937 IL15P40933 162 aaPredicted RBP27.76■■■□□ 2.03
PTCHD3P2-201ENST00000424937 VPS37DQ86XT2 251 aa27.76■■■□□ 2.03
PTCHD3P2-201ENST00000424937 JAG2Q9Y219 1238 aa27.76■■■□□ 2.03
PTCHD3P2-201ENST00000424937 ZBTB7BO15156 539 aaPredicted RBP27.75■■■□□ 2.03
PTCHD3P2-201ENST00000424937 FGFR2P21802 821 aa27.75■■■□□ 2.03
PTCHD3P2-201ENST00000424937 CAVIN4Q5BKX8 364 aa27.75■■■□□ 2.03
PTCHD3P2-201ENST00000424937 MYOZ2Q9NPC6 264 aa27.75■■■□□ 2.03
PTCHD3P2-201ENST00000424937 CEP126Q9P2H0 1117 aa27.75■■■□□ 2.03
PTCHD3P2-201ENST00000424937 ECM29Q5VYK3 1845 aa27.74■■■□□ 2.03
PTCHD3P2-201ENST00000424937 SLC5A1P13866 664 aa27.74■■■□□ 2.03
PTCHD3P2-201ENST00000424937 KIAA0825Q8IV33 1275 aa27.74■■■□□ 2.03
PTCHD3P2-201ENST00000424937 OGFOD1Q8N543 542 aa27.74■■■□□ 2.03
PTCHD3P2-201ENST00000424937 TDRD7Q8NHU6 1098 aaKnown RBP27.74■■■□□ 2.03
PTCHD3P2-201ENST00000424937 PGAP2Q9UHJ9 254 aa27.74■■■□□ 2.03
PTCHD3P2-201ENST00000424937 TRAF5O00463 557 aa27.73■■■□□ 2.03
PTCHD3P2-201ENST00000424937 ATP2B3Q16720 1220 aa27.73■■■□□ 2.03
PTCHD3P2-201ENST00000424937 LPIN2Q92539 896 aa27.73■■■□□ 2.03
PTCHD3P2-201ENST00000424937 GLIS2Q9BZE0 524 aaPredicted RBP27.73■■■□□ 2.03
PTCHD3P2-201ENST00000424937 FMR1Q06787 632 aaKnown RBP eCLIP27.72■■■□□ 2.03
PTCHD3P2-201ENST00000424937 MVPQ14764 893 aaKnown RBP27.72■■■□□ 2.03
PTCHD3P2-201ENST00000424937 FBXO33Q7Z6M2 555 aa27.72■■■□□ 2.03
PTCHD3P2-201ENST00000424937 CERS5Q8N5B7 392 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms