RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 ATP5JP18859 108 aa13.85□□□□□ -0.19
ERCC1-204ENST00000423698 ATG9AQ7Z3C6 839 aa13.85□□□□□ -0.19
ERCC1-204ENST00000423698 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
ERCC1-204ENST00000423698 TAF3Q5VWG9 929 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 PLBD2Q8NHP8 589 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 COPRSQ9NQ92 184 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 ST7Q9NRC1 585 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 HIP1O00291 1037 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 CCDC82Q8N4S0 544 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 LEO1Q8WVC0 666 aaPredicted RBP13.84□□□□□ -0.19
ERCC1-204ENST00000423698 PGBD1Q96JS3 809 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
ERCC1-204ENST00000423698 HEG1Q9ULI3 1381 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 PTGS1P23219 599 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
ERCC1-204ENST00000423698 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
ERCC1-204ENST00000423698 OSBP2Q969R2 916 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 KCNF1Q9H3M0 494 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 TYRO3Q06418 890 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 MAP3K11Q16584 847 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 TTC39AQ5SRH9 613 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 BRINP3Q76B58 766 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 TRIM5Q9C035 493 aa13.83□□□□□ -0.2
ERCC1-204ENST00000423698 PTPDC1A2A3K4 754 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 BIN1O00499 593 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 ZAP70P43403 619 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 HLFQ16534 295 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 TM6SF1Q9BZW5 370 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 CEP126Q9P2H0 1117 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 IDH1O75874 414 aaKnown RBP13.82□□□□□ -0.2
ERCC1-204ENST00000423698 CCDC192P0DO97 292 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 HSPD1P10809 573 aaKnown RBP13.82□□□□□ -0.2
ERCC1-204ENST00000423698 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 NKX2-3Q8TAU0 364 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 HAUS7Q99871 368 aa13.82□□□□□ -0.2
ERCC1-204ENST00000423698 CACNA1FO60840 1977 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 ME1P48163 572 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 GTF3C6Q969F1 213 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 MYL10Q9BUA6 226 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 UTYO14607 1347 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 MMP14P50281 582 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 ARID5BQ14865 1188 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 MAST3O60307 1309 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 E7EWF7 191 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 UBE2Q2LH0YL09 131 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 KCNQ4P56696 695 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 TOMM22Q9NS69 142 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 MRVI1Q9Y6F6 885 aa13.81□□□□□ -0.2
ERCC1-204ENST00000423698 NCBP1Q09161 790 aaKnown RBP13.8□□□□□ -0.2
ERCC1-204ENST00000423698 CADPS2Q86UW7 1296 aa13.8□□□□□ -0.2
ERCC1-204ENST00000423698 XAGE2Q96GT9 111 aa13.8□□□□□ -0.2
ERCC1-204ENST00000423698 PUS7LQ9H0K6 701 aaKnown RBP13.8□□□□□ -0.2
ERCC1-204ENST00000423698 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
ERCC1-204ENST00000423698 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.28e-9■■■■■ 31.3
ERCC1-204ENST00000423698 CBX8Q9HC52 389 aa13.8□□□□□ -0.2
ERCC1-204ENST00000423698 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
ERCC1-204ENST00000423698 KDM3BQ7LBC6 1761 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 EYA2O00167 538 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 CTDNEP1O95476 244 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 CASP7P55210 303 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 SLC20A2Q08357 652 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 METTL24Q5JXM2 366 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 CCDC186Q7Z3E2 898 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 MST1RQ04912 1400 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 PDCP20941 246 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 ACSBG1Q96GR2 724 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 CNNM1Q9NRU3 951 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
ERCC1-204ENST00000423698 HSP90AA4PQ58FG1 418 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
ERCC1-204ENST00000423698 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
ERCC1-204ENST00000423698 RRP12Q5JTH9 1297 aaKnown RBP13.78□□□□□ -0.2
ERCC1-204ENST00000423698 FILIP1Q7Z7B0 1213 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
ERCC1-204ENST00000423698 KIAA1524Q8TCG1 905 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 GOLPH3LQ9H4A5 285 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 GREM2Q9H772 168 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 H7C1W4 665 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 ATP2B1P20020 1258 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 ZNF165P49910 485 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 TMEM87AQ8NBN3 555 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 SLAIN2Q9P270 581 aa13.78□□□□□ -0.2
ERCC1-204ENST00000423698 SLIT3O75094 1523 aa13.77□□□□□ -0.2
ERCC1-204ENST00000423698 SLC4A8Q2Y0W8 1093 aa13.77□□□□□ -0.2
ERCC1-204ENST00000423698 DHX32Q7L7V1 743 aaKnown RBP13.77□□□□□ -0.2
ERCC1-204ENST00000423698 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.2
ERCC1-204ENST00000423698 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.2
ERCC1-204ENST00000423698 SENP2Q9HC62 589 aa13.77□□□□□ -0.2
ERCC1-204ENST00000423698 USP54Q70EL1 1684 aa13.77□□□□□ -0.2
ERCC1-204ENST00000423698 IL2RBP14784 551 aa13.77□□□□□ -0.21
ERCC1-204ENST00000423698 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms