RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 SMC3Q9UQE7 1217 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 BTAF1O14981 1849 aa16.09■□□□□ 0.17
PTPN6-203ENST00000416215 PRPF40AO75400 957 aaKnown RBP16.08■□□□□ 0.17
PTPN6-203ENST00000416215 KRT32Q14532 448 aa16.08■□□□□ 0.17
PTPN6-203ENST00000416215 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.17
PTPN6-203ENST00000416215 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.17
PTPN6-203ENST00000416215 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.17
PTPN6-203ENST00000416215 STOX1Q6ZVD7 989 aa16.08■□□□□ 0.17
PTPN6-203ENST00000416215 LPIN2Q92539 896 aa16.08■□□□□ 0.17
PTPN6-203ENST00000416215 BCL2L12Q9HB09 334 aa16.08■□□□□ 0.17
PTPN6-203ENST00000416215 SH2B1Q9NRF2 756 aaPredicted RBP16.08■□□□□ 0.17
PTPN6-203ENST00000416215 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.17
PTPN6-203ENST00000416215 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.16
PTPN6-203ENST00000416215 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.16
PTPN6-203ENST00000416215 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
PTPN6-203ENST00000416215 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
PTPN6-203ENST00000416215 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
PTPN6-203ENST00000416215 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.16
PTPN6-203ENST00000416215 AMIGO3Q86WK7 504 aa16.07■□□□□ 0.16
PTPN6-203ENST00000416215 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
PTPN6-203ENST00000416215 GNPATO15228 680 aa16.07■□□□□ 0.16
PTPN6-203ENST00000416215 RPS6KA4O75676 772 aa16.07■□□□□ 0.16
PTPN6-203ENST00000416215 ZFYP08048 801 aaPredicted RBP16.07■□□□□ 0.16
PTPN6-203ENST00000416215 GJB2P29033 226 aa16.07■□□□□ 0.16
PTPN6-203ENST00000416215 IGHMBP2P38935 993 aaKnown RBP16.07■□□□□ 0.16
PTPN6-203ENST00000416215 LRRFIP1Q32MZ4 808 aaKnown RBP16.07■□□□□ 0.16
PTPN6-203ENST00000416215 TTLL5Q6EMB2 1281 aa16.07■□□□□ 0.16
PTPN6-203ENST00000416215 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 SYT1P21579 422 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
PTPN6-203ENST00000416215 PIH1D3Q9NQM4 214 aaKnown RBP16.06■□□□□ 0.16
PTPN6-203ENST00000416215 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 LRP5O75197 1615 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
PTPN6-203ENST00000416215 FOXP2O15409 715 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
PTPN6-203ENST00000416215 ANKRD1Q15327 319 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 RC3H1Q5TC82 1133 aaKnown RBP16.06■□□□□ 0.16
PTPN6-203ENST00000416215 APPBP2Q92624 585 aa16.06■□□□□ 0.16
PTPN6-203ENST00000416215 MYO5AQ9Y4I1 1855 aaKnown RBP16.06■□□□□ 0.16
PTPN6-203ENST00000416215 COL4A1P02462 1669 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 ARID4AP29374 1257 aaPredicted RBP16.05■□□□□ 0.16
PTPN6-203ENST00000416215 STK3Q13188 491 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 IDH1O75874 414 aaKnown RBP16.05■□□□□ 0.16
PTPN6-203ENST00000416215 SLC5A1P13866 664 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 KLHL40Q2TBA0 621 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 Q6ZUG5 572 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 SEPT12Q8IYM1 358 aa16.05■□□□□ 0.16
PTPN6-203ENST00000416215 EP400Q96L91 3159 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 TAF1P21675 1872 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 STX6O43752 255 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
PTPN6-203ENST00000416215 GTF2E1P29083 439 aaPredicted RBP16.04■□□□□ 0.16
PTPN6-203ENST00000416215 CHRNDQ07001 517 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 RTL9Q8NET4 1388 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 E7EWF7 191 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 ADD2P35612 726 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 BCAMP50895 628 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 CCDC24Q8N4L8 307 aa16.04■□□□□ 0.16
PTPN6-203ENST00000416215 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTPN6-203ENST00000416215 NHSQ6T4R5 1651 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 WTIPA6NIX2 430 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-203ENST00000416215 GPAA1O43292 621 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-203ENST00000416215 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-203ENST00000416215 ARHGEF1Q92888 912 aaKnown RBP16.03■□□□□ 0.16
PTPN6-203ENST00000416215 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
PTPN6-203ENST00000416215 MYH7P12883 1935 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 TCHHQ07283 1943 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 GOLGA6L3A6NEY3 463 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 ZPR1O75312 459 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 FGAP02671 866 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 ZSCAN22P10073 491 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-203ENST00000416215 HAND2P61296 217 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 SPATA5Q8NB90 893 aa16.03■□□□□ 0.16
PTPN6-203ENST00000416215 TRPC5Q9UL62 973 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-203ENST00000416215 LAMA4Q16363 1823 aa16.02■□□□□ 0.16
PTPN6-203ENST00000416215 LAMB2P55268 1798 aa16.02■□□□□ 0.16
PTPN6-203ENST00000416215 SF3B3Q15393 1217 aaKnown RBP16.02■□□□□ 0.16
PTPN6-203ENST00000416215 DHX32Q7L7V1 743 aaKnown RBP16.02■□□□□ 0.16
PTPN6-203ENST00000416215 GPT2Q8TD30 523 aa16.02■□□□□ 0.16
PTPN6-203ENST00000416215 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
PTPN6-203ENST00000416215 CDC5LQ99459 802 aaKnown RBP16.02■□□□□ 0.16
PTPN6-203ENST00000416215 GDPD2Q9HCC8 539 aa16.02■□□□□ 0.16
PTPN6-203ENST00000416215 WWC3Q9ULE0 1092 aa16.02■□□□□ 0.16
PTPN6-203ENST00000416215 CHST3Q7LGC8 479 aa16.02■□□□□ 0.15
PTPN6-203ENST00000416215 BRF1Q92994 677 aa16.02■□□□□ 0.15
PTPN6-203ENST00000416215 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
PTPN6-203ENST00000416215 PHF14O94880 888 aa16.01■□□□□ 0.15
PTPN6-203ENST00000416215 ZSCAN25Q6NSZ9 544 aa16.01■□□□□ 0.15
PTPN6-203ENST00000416215 GAS2L3Q86XJ1 694 aa16.01■□□□□ 0.15
PTPN6-203ENST00000416215 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
PTPN6-203ENST00000416215 NSFL1CQ9UNZ2 370 aaKnown RBP16.01■□□□□ 0.15
PTPN6-203ENST00000416215 FGD1P98174 961 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms