RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 A0A1B0GUL7 405 aa25.39■■□□□ 1.66
C4orf48-202ENST00000409860 WTIPA6NIX2 430 aaPredicted RBP25.39■■□□□ 1.66
C4orf48-202ENST00000409860 IARSP41252 1262 aaKnown RBP25.39■■□□□ 1.66
C4orf48-202ENST00000409860 KIAA2012Q0VF49 1180 aa25.39■■□□□ 1.66
C4orf48-202ENST00000409860 C15orf52Q6ZUT6 534 aaKnown RBP25.39■■□□□ 1.66
C4orf48-202ENST00000409860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.39■■□□□ 1.66
C4orf48-202ENST00000409860 A0A1B0GUL6 1792 aa25.39■■□□□ 1.65
C4orf48-202ENST00000409860 RIMBP2O15034 1052 aa25.38■■□□□ 1.65
C4orf48-202ENST00000409860 AOC3Q16853 763 aa25.38■■□□□ 1.65
C4orf48-202ENST00000409860 LARGE2Q8N3Y3 721 aa25.38■■□□□ 1.65
C4orf48-202ENST00000409860 NEUROD6Q96NK8 337 aa25.38■■□□□ 1.65
C4orf48-202ENST00000409860 LMNB1P20700 586 aa25.37■■□□□ 1.65
C4orf48-202ENST00000409860 KLRK1P26718 216 aa25.37■■□□□ 1.65
C4orf48-202ENST00000409860 ANKRD45Q5TZF3 282 aa25.37■■□□□ 1.65
C4orf48-202ENST00000409860 AACSQ86V21 672 aa25.37■■□□□ 1.65
C4orf48-202ENST00000409860 G3V3G9 751 aa25.36■■□□□ 1.65
C4orf48-202ENST00000409860 SMARCA5O60264 1052 aaPredicted RBP25.36■■□□□ 1.65
C4orf48-202ENST00000409860 TIMM10P62072 90 aa25.36■■□□□ 1.65
C4orf48-202ENST00000409860 CAVIN4Q5BKX8 364 aa25.36■■□□□ 1.65
C4orf48-202ENST00000409860 DCAF8Q5TAQ9 597 aa25.36■■□□□ 1.65
C4orf48-202ENST00000409860 BCL11AQ9H165 835 aa25.36■■□□□ 1.65
C4orf48-202ENST00000409860 IRS2Q9Y4H2 1338 aa25.36■■□□□ 1.65
C4orf48-202ENST00000409860 CENPQQ7L2Z9 268 aaPredicted RBP25.35■■□□□ 1.65
C4orf48-202ENST00000409860 ZNF804AQ7Z570 1209 aa25.35■■□□□ 1.65
C4orf48-202ENST00000409860 VPS37DQ86XT2 251 aa25.35■■□□□ 1.65
C4orf48-202ENST00000409860 EAF2Q96CJ1 260 aaPredicted RBP25.35■■□□□ 1.65
C4orf48-202ENST00000409860 IFIT2P09913 472 aaKnown RBP25.34■■□□□ 1.65
C4orf48-202ENST00000409860 GORABQ5T7V8 394 aa25.34■■□□□ 1.65
C4orf48-202ENST00000409860 B4GALNT3Q6L9W6 998 aa25.34■■□□□ 1.65
C4orf48-202ENST00000409860 TXNRD3Q86VQ6 643 aa25.34■■□□□ 1.65
C4orf48-202ENST00000409860 NIM1KQ8IY84 436 aa25.34■■□□□ 1.65
C4orf48-202ENST00000409860 JDP2Q8WYK2 163 aa25.34■■□□□ 1.65
C4orf48-202ENST00000409860 XAGE2Q96GT9 111 aa25.34■■□□□ 1.65
C4orf48-202ENST00000409860 ADORA1P30542 326 aa25.33■■□□□ 1.65
C4orf48-202ENST00000409860 HIBADHP31937 336 aaKnown RBP25.33■■□□□ 1.65
C4orf48-202ENST00000409860 GYG1P46976 350 aa25.33■■□□□ 1.65
C4orf48-202ENST00000409860 COA1Q9GZY4 146 aa25.33■■□□□ 1.65
C4orf48-202ENST00000409860 KDM2BQ8NHM5 1336 aa25.33■■□□□ 1.64
C4orf48-202ENST00000409860 PRELPP51888 382 aa25.32■■□□□ 1.64
C4orf48-202ENST00000409860 FAM84BQ96KN1 310 aaPredicted RBP25.32■■□□□ 1.64
C4orf48-202ENST00000409860 CCDC8Q9H0W5 538 aaPredicted RBP25.32■■□□□ 1.64
C4orf48-202ENST00000409860 RNF181Q9P0P0 153 aa25.32■■□□□ 1.64
C4orf48-202ENST00000409860 NUCB1Q02818 461 aa25.31■■□□□ 1.64
C4orf48-202ENST00000409860 DOK7Q18PE1 504 aa25.31■■□□□ 1.64
C4orf48-202ENST00000409860 C9orf131Q5VYM1 1079 aa25.31■■□□□ 1.64
C4orf48-202ENST00000409860 FBXO33Q7Z6M2 555 aa25.31■■□□□ 1.64
C4orf48-202ENST00000409860 DBNDD2Q9BQY9 259 aa25.31■■□□□ 1.64
C4orf48-202ENST00000409860 DBNDD1Q9H9R9 158 aa25.31■■□□□ 1.64
C4orf48-202ENST00000409860 DBNLQ9UJU6 430 aaKnown RBP25.31■■□□□ 1.64
C4orf48-202ENST00000409860 ECE2O60344 883 aa25.3■■□□□ 1.64
C4orf48-202ENST00000409860 BCAMP50895 628 aa25.3■■□□□ 1.64
C4orf48-202ENST00000409860 CHD1LQ86WJ1 897 aa25.3■■□□□ 1.64
C4orf48-202ENST00000409860 GNL3LQ9NVN8 582 aaKnown RBP25.3■■□□□ 1.64
C4orf48-202ENST00000409860 GOLGB1Q14789 3259 aaKnown RBP25.3■■□□□ 1.64
C4orf48-202ENST00000409860 CCDC158Q5M9N0 1113 aa25.29■■□□□ 1.64
C4orf48-202ENST00000409860 PODNQ7Z5L7 613 aa25.29■■□□□ 1.64
C4orf48-202ENST00000409860 LNPKQ9C0E8 428 aa25.29■■□□□ 1.64
C4orf48-202ENST00000409860 CD209Q9NNX6 404 aa25.29■■□□□ 1.64
C4orf48-202ENST00000409860 TLR7Q9NYK1 1049 aaKnown RBP25.29■■□□□ 1.64
C4orf48-202ENST00000409860 CCDC102BQ68D86 513 aa25.28■■□□□ 1.64
C4orf48-202ENST00000409860 ZNRF3Q9ULT6 936 aa25.28■■□□□ 1.64
C4orf48-202ENST00000409860 ARAP2Q8WZ64 1704 aa25.27■■□□□ 1.64
C4orf48-202ENST00000409860 PHKA1P46020 1223 aa25.27■■□□□ 1.64
C4orf48-202ENST00000409860 TTC39AQ5SRH9 613 aa25.27■■□□□ 1.64
C4orf48-202ENST00000409860 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
C4orf48-202ENST00000409860 IL1R1P14778 569 aa25.26■■□□□ 1.63
C4orf48-202ENST00000409860 GPATCH3Q96I76 525 aa25.26■■□□□ 1.63
C4orf48-202ENST00000409860 COL4A5P29400 1685 aa25.26■■□□□ 1.63
C4orf48-202ENST00000409860 UQCRFS1P1P0C7P4 283 aa25.25■■□□□ 1.63
C4orf48-202ENST00000409860 TDRD7Q8NHU6 1098 aaKnown RBP25.25■■□□□ 1.63
C4orf48-202ENST00000409860 ZC3H4Q9UPT8 1303 aaKnown RBP25.24■■□□□ 1.63
C4orf48-202ENST00000409860 SEMA3EO15041 775 aa25.24■■□□□ 1.63
C4orf48-202ENST00000409860 EIF6P56537 245 aaKnown RBP25.24■■□□□ 1.63
C4orf48-202ENST00000409860 YDJCA8MPS7 323 aa25.23■■□□□ 1.63
C4orf48-202ENST00000409860 FZD9O00144 591 aa25.23■■□□□ 1.63
C4orf48-202ENST00000409860 ARID4AP29374 1257 aaPredicted RBP25.23■■□□□ 1.63
C4orf48-202ENST00000409860 C16orf71Q8IYS4 520 aaPredicted RBP25.23■■□□□ 1.63
C4orf48-202ENST00000409860 IQSEC3Q9UPP2 1182 aaPredicted RBP25.23■■□□□ 1.63
C4orf48-202ENST00000409860 ZBTB22O15209 634 aa25.22■■□□□ 1.63
C4orf48-202ENST00000409860 ZNF512BQ96KM6 892 aaPredicted RBP25.22■■□□□ 1.63
C4orf48-202ENST00000409860 ECHDC1Q9NTX5 307 aa25.22■■□□□ 1.63
C4orf48-202ENST00000409860 DENND2AQ9ULE3 1009 aa25.22■■□□□ 1.63
C4orf48-202ENST00000409860 GTF3C3Q9Y5Q9 886 aa25.22■■□□□ 1.63
C4orf48-202ENST00000409860 MX1P20591 662 aa25.21■■□□□ 1.63
C4orf48-202ENST00000409860 OTUD7AQ8TE49 926 aaPredicted RBP25.21■■□□□ 1.63
C4orf48-202ENST00000409860 FBXW7Q969H0 707 aa25.21■■□□□ 1.63
C4orf48-202ENST00000409860 SBF1O95248 1867 aa25.21■■□□□ 1.63
C4orf48-202ENST00000409860 TTC41PQ6P2S7 1318 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 USP17L3A6NCW0 530 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 USP17L4A6NCW7 530 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 RAD17O75943 681 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 CHAF1AQ13111 956 aaPredicted RBP25.2■■□□□ 1.62
C4orf48-202ENST00000409860 RASGRF1Q13972 1273 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 TNIP1Q15025 636 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 CIAPIN1Q6FI81 312 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 USP17L1Q7RTZ2 530 aa25.2■■□□□ 1.62
C4orf48-202ENST00000409860 GTF2IP78347 998 aa25.19■■□□□ 1.62
C4orf48-202ENST00000409860 CXCL9Q07325 125 aa25.19■■□□□ 1.62
C4orf48-202ENST00000409860 STRIP1Q5VSL9 837 aa25.19■■□□□ 1.62
C4orf48-202ENST00000409860 TTLL5Q6EMB2 1281 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms