RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 CNNM1Q9NRU3 951 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 PAG1Q9NWQ8 432 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 TRPC5Q9UL62 973 aaPredicted RBP7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 NIP7Q9Y221 180 aaKnown RBP eCLIP7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 NRAPQ86VF7 1730 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 KAT6BQ8WYB5 2073 aa7.53□□□□□ -1.2
GTF3C3-202ENST00000409364 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 CNTNAP4Q9C0A0 1308 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 RPS6KA4O75676 772 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 PTMSP20962 102 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 CUL4AQ13619 759 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 TSGA10IPQ3SY00 556 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 GPR153Q6NV75 609 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 KLHL34Q8N239 644 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 XAGE2Q96GT9 111 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 ZNF512BQ96KM6 892 aaPredicted RBP7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 GBP4Q96PP9 640 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 CCDC85AQ96PX6 553 aaPredicted RBP7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 HELLSQ9NRZ9 838 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 HMG20BQ9P0W2 317 aa7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 RBM8AQ9Y5S9 174 aaKnown RBP7.52□□□□□ -1.2
GTF3C3-202ENST00000409364 ITGB4P16144 1822 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 MROH5Q6ZUA9 1318 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 A0A0D9SFI3 127 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 GOLIM4O00461 696 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 TAF5LO75529 589 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 PDE8BO95263 885 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 ZFYP08048 801 aaPredicted RBP7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 HMGB2P26583 209 aaKnown RBP7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 SSFA2P28290 1259 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 ATP2B3Q16720 1220 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 CCDC152Q4G0S7 254 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 TTC39AQ5SRH9 613 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 PRPF40BQ6NWY9 871 aaKnown RBP7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 CLEC17AQ6ZS10 378 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 LINC00116Q8NCU8 138 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 EDC3Q96F86 508 aaKnown RBP7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 UPF3BQ9BZI7 483 aaKnown RBP7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 CYP46A1Q9Y6A2 500 aa7.52□□□□□ -1.21
GTF3C3-202ENST00000409364 AFF2P51816 1311 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 DDX11L8A8MPP1 907 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 RNF113AO15541 343 aaKnown RBP7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 HCLS1P14317 486 aaPredicted RBP7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 KRT32Q14532 448 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 VPS53Q5VIR6 699 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 CREB3L3Q68CJ9 461 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 DDX46Q7L014 1031 aaKnown RBP7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 TNPO1Q92973 898 aaKnown RBP7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 ZSCAN31Q96LW9 406 aaPredicted RBP7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 MPHOSPH8Q99549 860 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 LIMCH1Q9UPQ0 1083 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 NUP188Q5SRE5 1749 aa7.51□□□□□ -1.21
GTF3C3-202ENST00000409364 ABCC12Q96J65 1359 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 FAM177BA6PVY3 158 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 GOLGA6L22H0YM25 854 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 SLC27A2O14975 620 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 ZPR1O75312 459 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 NTSR2O95665 410 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 UQCRFS1P1P0C7P4 283 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 CASTP20810 708 aaKnown RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 IGHMBP2P38935 993 aaKnown RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 FKBP4Q02790 459 aaKnown RBP eCLIP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 GSE1Q14687 1217 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 ANKRD1Q15327 319 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 TTF1Q15361 905 aaPredicted RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 SLC10A5Q5PT55 438 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 ZMYM1Q5SVZ6 1142 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 RUFY3Q7L099 469 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 LPIN2Q92539 896 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 JAKMIP1Q96N16 626 aaKnown RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 TTC14Q96N46 770 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 ALDH8A1Q9H2A2 487 aaPredicted RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 QTRT2Q9H974 415 aaKnown RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 PDRG1Q9NUG6 133 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 PODXL2Q9NZ53 605 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 NARFQ9UHQ1 456 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 CCNL1Q9UK58 526 aaPredicted RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 RTCBQ9Y3I0 505 aaKnown RBP7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 RTL9Q8NET4 1388 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 MED23Q9ULK4 1368 aa7.5□□□□□ -1.21
GTF3C3-202ENST00000409364 ADORA1P30542 326 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 NUBP1P53384 320 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 PUM3Q15397 648 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 SKOR2Q2VWA4 1001 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 ZSCAN25Q6NSZ9 544 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 ZNF589Q86UQ0 364 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 VGLL2Q8N8G2 317 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 CDC5LQ99459 802 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 DSCC1Q9BVC3 393 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 BCL11BQ9C0K0 894 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■□□□ 11.5
GTF3C3-202ENST00000409364 NYXQ9GZU5 481 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 SH2B1Q9NRF2 756 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 NDUFB9Q9Y6M9 179 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 ZNF609O15014 1411 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 AFDNP55196 1824 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms