RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 BEGAINQ9BUH8 593 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 CNNM1Q9NRU3 951 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 HDAC9Q9UKV0 1011 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 SCN9AQ15858 1988 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 UTYO14607 1347 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 WDR33Q9C0J8 1336 aaKnown RBP11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 TRAF5O00463 557 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 HIRAP54198 1017 aaPredicted RBP11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 IFFO2Q5TF58 517 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 C15orf52Q6ZUT6 534 aaKnown RBP11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
SNORD88A-201ENST00000408314 KIF16BQ96L93 1317 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 CTCFP49711 727 aaPredicted RBP11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 RBM26Q5T8P6 1007 aaKnown RBP11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 C2orf69Q8N8R5 385 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 GMLQ99445 158 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 API5Q9BZZ5 524 aaKnown RBP11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 ZNF408Q9H9D4 720 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 KCNQ5Q9NR82 932 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 GGA3Q9NZ52 723 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
SNORD88A-201ENST00000408314 MROH5Q6ZUA9 1318 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 SHTN1A0MZ66 631 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 MAP2K2P36507 400 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 DACT2Q5SW24 774 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 CST9Q5W186 159 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 TTLL5Q6EMB2 1281 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 SAPCD2Q86UD0 394 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 USP48Q86UV5 1035 aa11.41□□□□□ -0.58
SNORD88A-201ENST00000408314 CA12O43570 354 aa11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 FKBP1BP68106 108 aa11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 UBE4AQ14139 1066 aa11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 SCARF1Q14162 830 aa11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 TRMT2AQ8IZ69 625 aaKnown RBP11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 GBA2Q9HCG7 927 aaPredicted RBP11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 CD209Q9NNX6 404 aa11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
SNORD88A-201ENST00000408314 A0A1B0GUL6 1792 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 NBPF7P0C2Y1 421 aaPredicted RBP11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 NF2P35240 595 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 HUNKP57058 714 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 NOGQ13253 232 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 GRM1Q13255 1194 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 APOBEC3FQ8IUX4 373 aaKnown RBP11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 WBP1LQ9NX94 342 aa11.39□□□□□ -0.59
SNORD88A-201ENST00000408314 COL1A1P02452 1464 aaPredicted RBP11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 ADM5C9JUS6 153 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 TAF5LO75529 589 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 EGFRP00533 1210 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 UBTFL1P0CB47 393 aaPredicted RBP11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 IL1R1P14778 569 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 GTF2IP78347 998 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 CYP4F22Q6NT55 531 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 TXNRD3Q86VQ6 643 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 CCDC102AQ96A19 550 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 CDCA5Q96FF9 252 aa11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
SNORD88A-201ENST00000408314 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 MYO1BO43795 1136 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 PLIN1O60240 522 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 KLRK1P26718 216 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 CAVIN4Q5BKX8 364 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 VPS37DQ86XT2 251 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 KIAA0825Q8IV33 1275 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 HELBQ8NG08 1087 aaPredicted RBP11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
SNORD88A-201ENST00000408314 PAPPA2Q9BXP8 1791 aa11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 FOXN1O15353 648 aa11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 HIBADHP31937 336 aaKnown RBP11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 DLGAP5Q15398 846 aa11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 COL13A1Q5TAT6 717 aaPredicted RBP11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 DIEXFQ68CQ4 756 aaKnown RBP11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 KAZALD1Q96I82 304 aa11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
SNORD88A-201ENST00000408314 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 PCNTO95613 3336 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 WTIPA6NIX2 430 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms