RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 NEDD9Q14511 834 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 NAA16Q6N069 864 aaPredicted RBP9.44□□□□□ -0.9
CHD8-201ENST00000399982 CWC27Q6UX04 472 aaKnown RBP9.44□□□□□ -0.9
CHD8-201ENST00000399982 TBC1D9Q6ZT07 1266 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 EVI5LQ96CN4 794 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 BAG1Q99933 345 aaPredicted RBP9.44□□□□□ -0.9
CHD8-201ENST00000399982 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 FAM169AQ9Y6X4 670 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 RNF10Q8N5U6 811 aaKnown RBP9.44□□□□□ -0.9
CHD8-201ENST00000399982 CCDC26Q8TAB7 109 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
CHD8-201ENST00000399982 GABPAQ06546 454 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 RASA3Q14644 834 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 DBN1Q16643 649 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 GBP5Q96PP8 586 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 NCOA2Q15596 1464 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 MINDY4BA8MYZ0 360 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 WDR46O15213 610 aaKnown RBP9.44□□□□□ -0.9
CHD8-201ENST00000399982 PRKAR2BP31323 418 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 AACSQ86V21 672 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 ZBTB9Q96C00 473 aa9.44□□□□□ -0.9
CHD8-201ENST00000399982 CCDC141Q6ZP82 1450 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 PHACTR2O75167 634 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 NCOA1Q15788 1441 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 USP37Q86T82 979 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 IFT20Q8IY31 132 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 DNAJC8O75937 253 aaPredicted RBP9.43□□□□□ -0.9
CHD8-201ENST00000399982 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 Q9H521 79 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 SYKP43405 635 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 TMEM57Q8N5G2 664 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 MORC4Q8TE76 937 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 C1orf115Q9H7X2 142 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 RRAGDQ9NQL2 400 aaPredicted RBP9.43□□□□□ -0.9
CHD8-201ENST00000399982 PPP2R5EQ16537 467 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 PLEKHO1Q53GL0 409 aaPredicted RBP9.43□□□□□ -0.9
CHD8-201ENST00000399982 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 FRMD4BQ9Y2L6 1034 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 NOC2LQ9Y3T9 749 aaKnown RBP9.43□□□□□ -0.9
CHD8-201ENST00000399982 TTC22Q5TAA0 569 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 ABCF2Q9UG63 623 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 F13A1P00488 732 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 EEF2P13639 858 aaKnown RBP9.43□□□□□ -0.9
CHD8-201ENST00000399982 RAB11FIP4Q86YS3 637 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 CABS1Q96KC9 395 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
CHD8-201ENST00000399982 MAP3K1Q13233 1512 aa9.43□□□□□ -0.9
CHD8-201ENST00000399982 IBTKQ9P2D0 1353 aaPredicted RBP9.43□□□□□ -0.9
CHD8-201ENST00000399982 TCP11L1Q9NUJ3 509 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 HDGFL1Q5TGJ6 251 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 NOP9Q86U38 636 aaKnown RBP9.42□□□□□ -0.9
CHD8-201ENST00000399982 FERMT3Q86UX7 667 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 TMX3Q96JJ7 454 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 AFG3L2Q9Y4W6 797 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 INSRP06213 1382 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 ZEB2O60315 1214 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 NUCB1Q02818 461 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 NAPGQ99747 312 aaPredicted RBP9.42□□□□□ -0.9
CHD8-201ENST00000399982 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
CHD8-201ENST00000399982 ZSWIM4Q9H7M6 989 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
CHD8-201ENST00000399982 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 USP48Q86UV5 1035 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 FAM71BQ8TC56 605 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 CALML4Q96GE6 196 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 ARHGAP6O43182 974 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 EVI5O60447 810 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 HSPA1LP34931 641 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 KCNK9Q9NPC2 374 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 LRRD1A4D1F6 860 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 GOLGA8KD6RF30 607 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 HIP1RO75146 1068 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
CHD8-201ENST00000399982 CALCOCO2Q13137 446 aa9.42□□□□□ -0.9
CHD8-201ENST00000399982 UAP1Q16222 522 aaPredicted RBP9.42□□□□□ -0.9
CHD8-201ENST00000399982 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
CHD8-201ENST00000399982 SSRP1Q08945 709 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 A0A087WUV0 522 aaPredicted RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 GOLGA6BA6NDN3 693 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 PSMA7O14818 248 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 CHMP2AO43633 222 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 HMGB2P26583 209 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 CXorf38Q8TB03 319 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 GSDMBQ8TAX9 411 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 MPHOSPH6Q99547 160 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 IDH1O75874 414 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 VIMP08670 466 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 CABP4P57796 275 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 CDR2Q01850 454 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 MTUS1Q9ULD2 1270 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 PAK2Q13177 524 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 ZBTB41Q5SVQ8 909 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms