RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 GLTPD2A6NH11 291 aa15.15■□□□□ 0.02
SMIM11A-201ENST00000399292 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
SMIM11A-201ENST00000399292 RRAGCQ9HB90 399 aa15.15■□□□□ 0.02
SMIM11A-201ENST00000399292 RIC1Q4ADV7 1423 aa15.15■□□□□ 0.02
SMIM11A-201ENST00000399292 SH3TC1Q8TE82 1336 aa15.15■□□□□ 0.02
SMIM11A-201ENST00000399292 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 ATP5J2-PTCD1G3V325 749 aa15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 TOMM70O94826 608 aa15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 HCLS1P14317 486 aaPredicted RBP15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 FKBP4Q02790 459 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 TRIM28Q13263 835 aaKnown RBP15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 C16orf71Q8IYS4 520 aaPredicted RBP15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 SYNE4Q8N205 404 aa15.14■□□□□ 0.01
SMIM11A-201ENST00000399292 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
SMIM11A-201ENST00000399292 DDX58O95786 925 aaKnown RBP15.13■□□□□ 0.01
SMIM11A-201ENST00000399292 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
SMIM11A-201ENST00000399292 GRIPAP1Q4V328 841 aa15.13■□□□□ 0.01
SMIM11A-201ENST00000399292 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
SMIM11A-201ENST00000399292 STK31Q9BXU1 1019 aa15.13■□□□□ 0.01
SMIM11A-201ENST00000399292 TMX4Q9H1E5 349 aaPredicted RBP15.13■□□□□ 0.01
SMIM11A-201ENST00000399292 PADI6Q6TGC4 694 aa15.12■□□□□ 0.01
SMIM11A-201ENST00000399292 FAM89AQ96GI7 184 aa15.12■□□□□ 0.01
SMIM11A-201ENST00000399292 TCERG1O14776 1098 aaKnown RBP15.11■□□□□ 0.01
SMIM11A-201ENST00000399292 PPEF1O14829 653 aaPredicted RBP15.11■□□□□ 0.01
SMIM11A-201ENST00000399292 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
SMIM11A-201ENST00000399292 MLLT3P42568 568 aaPredicted RBP15.11■□□□□ 0.01
SMIM11A-201ENST00000399292 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
SMIM11A-201ENST00000399292 SBF1O95248 1867 aa15.1■□□□□ 0.01
SMIM11A-201ENST00000399292 BBOX1O75936 387 aa15.1■□□□□ 0.01
SMIM11A-201ENST00000399292 DDX46Q7L014 1031 aaKnown RBP15.1■□□□□ 0.01
SMIM11A-201ENST00000399292 PSMD1Q99460 953 aa15.1■□□□□ 0.01
SMIM11A-201ENST00000399292 MYD88Q99836 296 aa15.1■□□□□ 0.01
SMIM11A-201ENST00000399292 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
SMIM11A-201ENST00000399292 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 KSR2Q6VAB6 950 aa15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 CCDC191Q8NCU4 936 aa15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 RBM46Q8TBY0 533 aaKnown RBP15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 METTL22Q9BUU2 404 aaPredicted RBP15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 IRX2Q9BZI1 471 aaPredicted RBP15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 ATP6V0A2Q9Y487 856 aa15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 TNRC6CQ9HCJ0 1690 aaKnown RBP15.09■□□□□ 0.01
SMIM11A-201ENST00000399292 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
SMIM11A-201ENST00000399292 IRS4O14654 1257 aaPredicted RBP15.08■□□□□ 0
SMIM11A-201ENST00000399292 VAMP4O75379 141 aa15.08■□□□□ 0
SMIM11A-201ENST00000399292 HSP90B1P14625 803 aaKnown RBP15.08■□□□□ 0
SMIM11A-201ENST00000399292 HSPA6P17066 643 aa15.08■□□□□ 0
SMIM11A-201ENST00000399292 IARSP41252 1262 aaKnown RBP15.08■□□□□ 0
SMIM11A-201ENST00000399292 EXOSC9Q06265 439 aaKnown RBP15.08■□□□□ 0
SMIM11A-201ENST00000399292 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
SMIM11A-201ENST00000399292 ZBTB38Q8NAP3 1195 aaPredicted RBP15.08■□□□□ 0
SMIM11A-201ENST00000399292 MAP3K2Q9Y2U5 619 aa15.08■□□□□ 0
SMIM11A-201ENST00000399292 ABCC4O15439 1325 aa15.08■□□□□ 0
SMIM11A-201ENST00000399292 FER1L6Q2WGJ9 1857 aa15.08■□□□□ 0
SMIM11A-201ENST00000399292 DDNO94850 711 aaPredicted RBP15.07■□□□□ 0
SMIM11A-201ENST00000399292 GRAPQ13588 217 aa15.07■□□□□ 0
SMIM11A-201ENST00000399292 SF3B3Q15393 1217 aaKnown RBP15.07■□□□□ 0
SMIM11A-201ENST00000399292 SP8Q8IXZ3 490 aa15.07■□□□□ 0
SMIM11A-201ENST00000399292 GRAPLQ8TC17 118 aaPredicted RBP15.07■□□□□ 0
SMIM11A-201ENST00000399292 JDP2Q8WYK2 163 aa15.07■□□□□ 0
SMIM11A-201ENST00000399292 CWC25Q9NXE8 425 aaPredicted RBP15.07■□□□□ 0
SMIM11A-201ENST00000399292 ARFGEF2Q9Y6D5 1785 aa15.06■□□□□ 0
SMIM11A-201ENST00000399292 NEXNQ0ZGT2 675 aa15.06■□□□□ 0
SMIM11A-201ENST00000399292 TJAP1Q5JTD0 557 aa15.06■□□□□ 0
SMIM11A-201ENST00000399292 G2E3Q7L622 706 aa15.06■□□□□ 0
SMIM11A-201ENST00000399292 POTECB2RU33 542 aa15.05■□□□□ -0
SMIM11A-201ENST00000399292 PCCAP05165 728 aaPredicted RBP15.05■□□□□ -0
SMIM11A-201ENST00000399292 FSTL1Q12841 308 aa15.05■□□□□ -0
SMIM11A-201ENST00000399292 TMC4Q7Z404 712 aa15.05■□□□□ -0
SMIM11A-201ENST00000399292 CACNA1SQ13698 1873 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 SNED1Q8TER0 1413 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 FZD9O00144 591 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 RNF40O75150 1001 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 FLIIQ13045 1269 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 DPP8Q6V1X1 898 aaPredicted RBP15.04■□□□□ -0
SMIM11A-201ENST00000399292 LARGE2Q8N3Y3 721 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 MPNDQ8N594 471 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 SUPT20HQ8NEM7 779 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 VPS33BQ9H267 617 aa15.04■□□□□ -0
SMIM11A-201ENST00000399292 ANKRD36CQ5JPF3 1778 aa15.03■□□□□ -0
SMIM11A-201ENST00000399292 IGKV5-2P06315 115 aa15.03■□□□□ -0
SMIM11A-201ENST00000399292 FKBP5Q13451 457 aaPredicted RBP15.03■□□□□ -0
SMIM11A-201ENST00000399292 SLC51AQ86UW1 340 aa15.03■□□□□ -0
SMIM11A-201ENST00000399292 SMC1BQ8NDV3 1235 aa15.03■□□□□ -0
SMIM11A-201ENST00000399292 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
SMIM11A-201ENST00000399292 CCDC88AQ3V6T2 1871 aa15.02■□□□□ -0
SMIM11A-201ENST00000399292 ZNF521Q96K83 1311 aa15.02■□□□□ -0
SMIM11A-201ENST00000399292 IQCA1LA6NCM1 817 aa15.02■□□□□ -0
SMIM11A-201ENST00000399292 CCER2I3L3R5 266 aa15.02■□□□□ -0
SMIM11A-201ENST00000399292 PDE8AO60658 829 aa15.02■□□□□ -0
SMIM11A-201ENST00000399292 APLP1P51693 650 aa15.02■□□□□ -0
SMIM11A-201ENST00000399292 EIF6P56537 245 aaKnown RBP15.02■□□□□ -0
SMIM11A-201ENST00000399292 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
SMIM11A-201ENST00000399292 SWT1Q5T5J6 900 aaKnown RBP15.02■□□□□ -0
SMIM11A-201ENST00000399292 CELF1Q92879 486 aaKnown RBP15.02■□□□□ -0
SMIM11A-201ENST00000399292 RTFDC1Q9BY42 306 aaPredicted RBP15.02■□□□□ -0
SMIM11A-201ENST00000399292 ZNF541Q9H0D2 1346 aa15.01□□□□□ -0.01
SMIM11A-201ENST00000399292 NEURL1BA8MQ27 555 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms