RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 ATP2B3Q16720 1220 aa21.46■■□□□ 1.03
CSNK1D-204ENST00000398519 LPIN2Q92539 896 aa21.46■■□□□ 1.03
CSNK1D-204ENST00000398519 ZNF609O15014 1411 aa21.45■■□□□ 1.03
CSNK1D-204ENST00000398519 FZD9O00144 591 aa21.45■■□□□ 1.02
CSNK1D-204ENST00000398519 HSP90AB4PQ58FF6 505 aa21.45■■□□□ 1.02
CSNK1D-204ENST00000398519 ARAP2Q8WZ64 1704 aa21.45■■□□□ 1.02
CSNK1D-204ENST00000398519 YDJCA8MPS7 323 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 ECE2O60344 883 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 HDAC1Q13547 482 aaPredicted RBP21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 ERC1Q8IUD2 1116 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 ZNRF3Q9ULT6 936 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 ZNF541Q9H0D2 1346 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 IFIT1P09914 478 aaKnown RBP21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 SLC5A1P13866 664 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 DCTPP1Q9H773 170 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 AKAP2Q9Y2D5 859 aa21.44■■□□□ 1.02
CSNK1D-204ENST00000398519 A0A1B0GUL7 405 aa21.43■■□□□ 1.02
CSNK1D-204ENST00000398519 APBB1O00213 710 aa21.43■■□□□ 1.02
CSNK1D-204ENST00000398519 GYG1P46976 350 aa21.43■■□□□ 1.02
CSNK1D-204ENST00000398519 RHPN1Q8TCX5 695 aa21.43■■□□□ 1.02
CSNK1D-204ENST00000398519 FAM84BQ96KN1 310 aaPredicted RBP21.43■■□□□ 1.02
CSNK1D-204ENST00000398519 COA1Q9GZY4 146 aa21.43■■□□□ 1.02
CSNK1D-204ENST00000398519 G3V3G9 751 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 RAB11FIP3O75154 756 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 TIMM10P62072 90 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 TNNI3KQ59H18 835 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 DCAF8Q5TAQ9 597 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 GPR108Q9NPR9 543 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 FPGT-TNNI3KV9GXZ4 949 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 SCN9AQ15858 1988 aa21.42■■□□□ 1.02
CSNK1D-204ENST00000398519 ZNF804AQ7Z570 1209 aa21.41■■□□□ 1.02
CSNK1D-204ENST00000398519 KIF1BPQ96EK5 621 aa21.41■■□□□ 1.02
CSNK1D-204ENST00000398519 CD209Q9NNX6 404 aa21.41■■□□□ 1.02
CSNK1D-204ENST00000398519 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
CSNK1D-204ENST00000398519 ADORA1P30542 326 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 PODNQ7Z5L7 613 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 FBXO33Q7Z6M2 555 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 IL1RAPL2Q9NP60 686 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 NEFLP07196 543 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 HIBADHP31937 336 aaKnown RBP21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 BCAMP50895 628 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 EIF6P56537 245 aaKnown RBP21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 CXCL9Q07325 125 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 CAVIN4Q5BKX8 364 aa21.4■■□□□ 1.02
CSNK1D-204ENST00000398519 RAD17O75943 681 aa21.39■■□□□ 1.01
CSNK1D-204ENST00000398519 IGHDP01880 384 aa21.39■■□□□ 1.01
CSNK1D-204ENST00000398519 IL1R1P14778 569 aa21.39■■□□□ 1.01
CSNK1D-204ENST00000398519 EAF2Q96CJ1 260 aaPredicted RBP21.39■■□□□ 1.01
CSNK1D-204ENST00000398519 XAGE2Q96GT9 111 aa21.39■■□□□ 1.01
CSNK1D-204ENST00000398519 NEUROD6Q96NK8 337 aa21.39■■□□□ 1.01
CSNK1D-204ENST00000398519 RWDD1Q9H446 243 aaPredicted RBP21.39■■□□□ 1.01
CSNK1D-204ENST00000398519 ZNF646O15015 1829 aaPredicted RBP21.38■■□□□ 1.01
CSNK1D-204ENST00000398519 PSME4Q14997 1843 aa21.38■■□□□ 1.01
CSNK1D-204ENST00000398519 YY1P25490 414 aa21.38■■□□□ 1.01
CSNK1D-204ENST00000398519 VPS37DQ86XT2 251 aa21.38■■□□□ 1.01
CSNK1D-204ENST00000398519 LRRCC1Q9C099 1032 aa21.38■■□□□ 1.01
CSNK1D-204ENST00000398519 GLTPD2A6NH11 291 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 DDNO94850 711 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 CIAPIN1Q6FI81 312 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 TDRD7Q8NHU6 1098 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 TLR7Q9NYK1 1049 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 PSMD14O00487 310 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 SMARCA5O60264 1052 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 PHKA1P46020 1223 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 CCDC102BQ68D86 513 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 DPY19L2Q6NUT2 758 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 AACSQ86V21 672 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 GPC2Q8N158 579 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 CLASRPQ8N2M8 674 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 GCC1Q96CN9 775 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 DBNDD2Q9BQY9 259 aa21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 CCDC8Q9H0W5 538 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 DBNLQ9UJU6 430 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 IQSEC3Q9UPP2 1182 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-204ENST00000398519 TNIP1Q15025 636 aa21.35■■□□□ 1.01
CSNK1D-204ENST00000398519 GJA3Q9Y6H8 435 aa21.35■■□□□ 1.01
CSNK1D-204ENST00000398519 USP17L3A6NCW0 530 aa21.34■■□□□ 1.01
CSNK1D-204ENST00000398519 USP17L4A6NCW7 530 aa21.34■■□□□ 1.01
CSNK1D-204ENST00000398519 USP17L1Q7RTZ2 530 aa21.34■■□□□ 1.01
CSNK1D-204ENST00000398519 BCL11AQ9H165 835 aa21.34■■□□□ 1.01
CSNK1D-204ENST00000398519 COL1A1P02452 1464 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-204ENST00000398519 GTF2IP78347 998 aa21.33■■□□□ 1.01
CSNK1D-204ENST00000398519 STRIP1Q5VSL9 837 aa21.33■■□□□ 1.01
CSNK1D-204ENST00000398519 SMC5Q8IY18 1101 aa21.33■■□□□ 1.01
CSNK1D-204ENST00000398519 VIL1P09327 827 aaKnown RBP21.32■■□□□ 1
CSNK1D-204ENST00000398519 DACT2Q5SW24 774 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 GORABQ5T7V8 394 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 TTLL5Q6EMB2 1281 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 ZNF526Q8TF50 670 aaPredicted RBP21.32■■□□□ 1
CSNK1D-204ENST00000398519 FBXW7Q969H0 707 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 JAG2Q9Y219 1238 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 KDM2BQ8NHM5 1336 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 WDR90Q96KV7 1748 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 MYH13Q9UKX3 1938 aa21.32■■□□□ 1
CSNK1D-204ENST00000398519 MXD3Q9BW11 206 aa21.31■■□□□ 1
CSNK1D-204ENST00000398519 GNL3LQ9NVN8 582 aaKnown RBP21.31■■□□□ 1
CSNK1D-204ENST00000398519 ZBTB12Q9Y330 459 aaPredicted RBP21.31■■□□□ 1
CSNK1D-204ENST00000398519 FAM205AQ6ZU69 1335 aa21.31■■□□□ 1
CSNK1D-204ENST00000398519 FRAT2O75474 233 aaPredicted RBP21.31■■□□□ 1
CSNK1D-204ENST00000398519 RSBN1LQ6PCB5 846 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms