RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 RXRAP19793 462 aa27.58■■■□□ 2.01
KHSRP-201ENST00000398148 PPP1R13BQ96KQ4 1090 aa27.58■■■□□ 2.01
KHSRP-201ENST00000398148 KRT32Q14532 448 aa27.57■■■□□ 2
KHSRP-201ENST00000398148 GCKRQ14397 625 aa27.57■■■□□ 2
KHSRP-201ENST00000398148 NFATC2IPQ8NCF5 419 aa27.57■■■□□ 2
KHSRP-201ENST00000398148 ZFP91Q96JP5 570 aaPredicted RBP27.57■■■□□ 2
KHSRP-201ENST00000398148 BABAM1Q9NWV8 329 aa27.57■■■□□ 2
KHSRP-201ENST00000398148 ERO1AQ96HE7 468 aa27.56■■■□□ 2
KHSRP-201ENST00000398148 ZNF594Q96JF6 807 aaPredicted RBP27.56■■■□□ 2
KHSRP-201ENST00000398148 SFPQP23246 707 aaKnown RBP eCLIP27.56■■■□□ 2
KHSRP-201ENST00000398148 DHX32Q7L7V1 743 aaKnown RBP27.56■■■□□ 2
KHSRP-201ENST00000398148 ENGASEQ8NFI3 743 aa27.56■■■□□ 2
KHSRP-201ENST00000398148 PTPN12Q05209 780 aaKnown RBP27.55■■■□□ 2
KHSRP-201ENST00000398148 URI1O94763 535 aaPredicted RBP27.55■■■□□ 2
KHSRP-201ENST00000398148 MRPS27Q92552 414 aaKnown RBP27.55■■■□□ 2
KHSRP-201ENST00000398148 ZCCHC17Q9NP64 241 aaKnown RBP27.55■■■□□ 2
KHSRP-201ENST00000398148 U3KPZ7 1027 aaPredicted RBP27.55■■■□□ 2
KHSRP-201ENST00000398148 FMN2Q9NZ56 1722 aa27.55■■■□□ 2
KHSRP-201ENST00000398148 FKBP4Q02790 459 aaKnown RBP eCLIP27.54■■■□□ 2
KHSRP-201ENST00000398148 PDIA6Q15084 440 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 SARM1Q6SZW1 724 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 AIFM3Q96NN9 605 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 A0A087WZG4 1122 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 NWD1Q149M9 1564 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 PHF8Q9UPP1 1060 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 PFKFB2O60825 505 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 CDC25BP30305 580 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 CLCN6P51797 869 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 ZC3H6P61129 1189 aaKnown RBP27.54■■■□□ 2
KHSRP-201ENST00000398148 LMBR1LQ6UX01 489 aa27.54■■■□□ 2
KHSRP-201ENST00000398148 E7EWF7 191 aa27.53■■■□□ 2
KHSRP-201ENST00000398148 GABPB1Q06547 395 aaPredicted RBP27.53■■■□□ 2
KHSRP-201ENST00000398148 DPF2Q92785 391 aa27.53■■■□□ 2
KHSRP-201ENST00000398148 ZNF396Q96N95 335 aaPredicted RBP27.53■■■□□ 2
KHSRP-201ENST00000398148 PDIA3P30101 505 aaKnown RBP27.53■■■□□ 2
KHSRP-201ENST00000398148 DDX21Q9NR30 783 aaKnown RBP eCLIP27.53■■■□□ 2
KHSRP-201ENST00000398148 ZSWIM4Q9H7M6 989 aa27.52■■■□□ 2
KHSRP-201ENST00000398148 AXIN2Q9Y2T1 843 aa27.52■■■□□ 2
KHSRP-201ENST00000398148 UTP14AQ9BVJ6 771 aaKnown RBP27.52■■■□□ 2
KHSRP-201ENST00000398148 HOXB7P09629 217 aa27.51■■■□□ 2
KHSRP-201ENST00000398148 FDPSP14324 419 aaKnown RBP27.51■■■□□ 2
KHSRP-201ENST00000398148 ATP5JP18859 108 aa27.51■■■□□ 2
KHSRP-201ENST00000398148 GNL2Q13823 731 aaKnown RBP27.51■■■□□ 2
KHSRP-201ENST00000398148 SMARCC2Q8TAQ2 1214 aa27.51■■■□□ 2
KHSRP-201ENST00000398148 NAT10Q9H0A0 1025 aaKnown RBP27.51■■■□□ 2
KHSRP-201ENST00000398148 PXDNQ92626 1479 aa27.51■■■□□ 2
KHSRP-201ENST00000398148 SYCP1Q15431 976 aa27.51■■□□□ 1.99
KHSRP-201ENST00000398148 SPECC1Q5M775 1068 aa27.51■■□□□ 1.99
KHSRP-201ENST00000398148 USPL1Q5W0Q7 1092 aa27.51■■□□□ 1.99
KHSRP-201ENST00000398148 FMR1NBQ8N0W7 255 aaPredicted RBP27.51■■□□□ 1.99
KHSRP-201ENST00000398148 ZNF330Q9Y3S2 320 aaPredicted RBP27.51■■□□□ 1.99
KHSRP-201ENST00000398148 CTAGE5O15320 804 aa27.51■■□□□ 1.99
KHSRP-201ENST00000398148 GYS2P54840 703 aa27.51■■□□□ 1.99
KHSRP-201ENST00000398148 SLC3A2P08195 630 aaKnown RBP27.5■■□□□ 1.99
KHSRP-201ENST00000398148 CCDC34Q96HJ3 373 aa27.5■■□□□ 1.99
KHSRP-201ENST00000398148 NOL10Q9BSC4 688 aaKnown RBP27.5■■□□□ 1.99
KHSRP-201ENST00000398148 KIAA1468Q9P260 1216 aa27.5■■□□□ 1.99
KHSRP-201ENST00000398148 DENND2AQ9ULE3 1009 aa27.5■■□□□ 1.99
KHSRP-201ENST00000398148 PIK3C2AO00443 1686 aa27.5■■□□□ 1.99
KHSRP-201ENST00000398148 WASHC4Q2M389 1173 aa27.5■■□□□ 1.99
KHSRP-201ENST00000398148 PDILTQ8N807 584 aa27.5■■□□□ 1.99
KHSRP-201ENST00000398148 ANKRD24Q8TF21 1146 aa27.5■■□□□ 1.99
KHSRP-201ENST00000398148 ANKRD13DQ6ZTN6 518 aa27.49■■□□□ 1.99
KHSRP-201ENST00000398148 SERPINC1P01008 464 aa27.49■■□□□ 1.99
KHSRP-201ENST00000398148 NEK11Q8NG66 645 aa27.49■■□□□ 1.99
KHSRP-201ENST00000398148 ZNF496Q96IT1 587 aaPredicted RBP27.49■■□□□ 1.99
KHSRP-201ENST00000398148 CARD6Q9BX69 1037 aa27.49■■□□□ 1.99
KHSRP-201ENST00000398148 TMEM232C9JQI7 657 aa27.48■■□□□ 1.99
KHSRP-201ENST00000398148 NEMFO60524 1076 aa27.48■■□□□ 1.99
KHSRP-201ENST00000398148 CFAP100Q494V2 611 aa27.48■■□□□ 1.99
KHSRP-201ENST00000398148 NALCNQ8IZF0 1738 aa27.48■■□□□ 1.99
KHSRP-201ENST00000398148 HSPD1P10809 573 aaKnown RBP27.48■■□□□ 1.99
KHSRP-201ENST00000398148 TSGA10IPQ3SY00 556 aa27.48■■□□□ 1.99
KHSRP-201ENST00000398148 C8orf76Q96K31 380 aa27.48■■□□□ 1.99
KHSRP-201ENST00000398148 HDAC5Q9UQL6 1122 aa27.48■■□□□ 1.99
KHSRP-201ENST00000398148 ZNF202O95125 648 aa27.47■■□□□ 1.99
KHSRP-201ENST00000398148 KIF28PB7ZC32 967 aa27.47■■□□□ 1.99
KHSRP-201ENST00000398148 MNS1Q8NEH6 495 aa27.47■■□□□ 1.99
KHSRP-201ENST00000398148 PAG1Q9NWQ8 432 aa27.47■■□□□ 1.99
KHSRP-201ENST00000398148 NAA16Q6N069 864 aaPredicted RBP27.46■■□□□ 1.99
KHSRP-201ENST00000398148 CARMIL3Q8ND23 1372 aa27.46■■□□□ 1.99
KHSRP-201ENST00000398148 FANCGO15287 622 aa27.46■■□□□ 1.99
KHSRP-201ENST00000398148 UBXN4Q92575 508 aa27.46■■□□□ 1.99
KHSRP-201ENST00000398148 CLIC6Q96NY7 704 aa27.46■■□□□ 1.99
KHSRP-201ENST00000398148 ORC3Q9UBD5 711 aaPredicted RBP27.46■■□□□ 1.99
KHSRP-201ENST00000398148 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.46■■□□□ 1.992e-7■■■□□ 18.1
KHSRP-201ENST00000398148 DIP2BQ9P265 1576 aa27.46■■□□□ 1.99
KHSRP-201ENST00000398148 KLF18A0A0U1RQI7 1052 aa27.45■■□□□ 1.99
KHSRP-201ENST00000398148 CDK11BP21127 795 aaKnown RBP27.45■■□□□ 1.99
KHSRP-201ENST00000398148 LRRC24Q50LG9 513 aa27.45■■□□□ 1.99
KHSRP-201ENST00000398148 ZNF790Q6PG37 636 aa27.45■■□□□ 1.99
KHSRP-201ENST00000398148 UBE2Q2LH0YL09 131 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 SPTLC2O15270 562 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 CAVIN2O95810 425 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 FANCCQ00597 558 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 PNOCQ13519 176 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 SYNE3Q6ZMZ3 975 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 NLRP2Q9NX02 1062 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 GOLGA8BA8MQT2 603 aa27.45■■□□□ 1.98
KHSRP-201ENST00000398148 M0R2C6 588 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms