RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CACNA1SQ13698 1873 aa33.43■■■□□ 2.94
CPNE1-203ENST00000397442 MCAMP43121 646 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 BCAMP50895 628 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 GPSM2P81274 684 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 ZNF622Q969S3 477 aaKnown RBP eCLIP33.42■■■□□ 2.944e-6■■□□□ 12.1
CPNE1-203ENST00000397442 ANKIB1Q9P2G1 1089 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 ATP6V0A2Q9Y487 856 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 DLEC1Q9Y238 1755 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 KLRK1P26718 216 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 SGIP1Q9BQI5 828 aa33.42■■■□□ 2.94
CPNE1-203ENST00000397442 KCNJ4P48050 445 aa33.41■■■□□ 2.94
CPNE1-203ENST00000397442 LEMD3Q9Y2U8 911 aa33.41■■■□□ 2.94
CPNE1-203ENST00000397442 UQCRFS1P1P0C7P4 283 aa33.4■■■□□ 2.94
CPNE1-203ENST00000397442 POLD1P28340 1107 aa33.4■■■□□ 2.94
CPNE1-203ENST00000397442 CASC1Q6TDU7 716 aa33.4■■■□□ 2.94
CPNE1-203ENST00000397442 PI16Q6UXB8 463 aa33.4■■■□□ 2.94
CPNE1-203ENST00000397442 PAG1Q9NWQ8 432 aa33.4■■■□□ 2.94
CPNE1-203ENST00000397442 PODXL2Q9NZ53 605 aa33.4■■■□□ 2.94
CPNE1-203ENST00000397442 SNRKQ9NRH2 765 aa33.39■■■□□ 2.94
CPNE1-203ENST00000397442 SLX4Q8IY92 1834 aa33.39■■■□□ 2.94
CPNE1-203ENST00000397442 GOLIM4O00461 696 aa33.39■■■□□ 2.94
CPNE1-203ENST00000397442 GYG1P46976 350 aa33.39■■■□□ 2.94
CPNE1-203ENST00000397442 FAM84BQ96KN1 310 aaPredicted RBP33.39■■■□□ 2.94
CPNE1-203ENST00000397442 RBM19Q9Y4C8 960 aaKnown RBP33.39■■■□□ 2.94
CPNE1-203ENST00000397442 NSFL1CQ9UNZ2 370 aaKnown RBP33.38■■■□□ 2.93
CPNE1-203ENST00000397442 ZAP70P43403 619 aa33.37■■■□□ 2.93
CPNE1-203ENST00000397442 FKBP4Q02790 459 aaKnown RBP eCLIP33.37■■■□□ 2.93
CPNE1-203ENST00000397442 FSD1Q9BTV5 496 aa33.37■■■□□ 2.93
CPNE1-203ENST00000397442 ANTXR1Q9H6X2 564 aa33.37■■■□□ 2.93
CPNE1-203ENST00000397442 MFAP1P55081 439 aaKnown RBP33.36■■■□□ 2.93
CPNE1-203ENST00000397442 RASGRF1Q13972 1273 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 PRPF40BQ6NWY9 871 aaKnown RBP33.36■■■□□ 2.93
CPNE1-203ENST00000397442 FBXO33Q7Z6M2 555 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 TXNRD3Q86VQ6 643 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 KBTBD3Q8NAB2 608 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 KIAA1551Q9HCM1 1747 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 OLFM4Q6UX06 510 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 CNKSR1Q969H4 720 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 HMG20BQ9P0W2 317 aa33.36■■■□□ 2.93
CPNE1-203ENST00000397442 CAVIN4Q5BKX8 364 aa33.35■■■□□ 2.93
CPNE1-203ENST00000397442 ESYT1Q9BSJ8 1104 aa33.35■■■□□ 2.93
CPNE1-203ENST00000397442 ATP2B4P23634 1241 aa33.34■■■□□ 2.93
CPNE1-203ENST00000397442 PTGER2P43116 358 aa33.34■■■□□ 2.93
CPNE1-203ENST00000397442 C15orf52Q6ZUT6 534 aaKnown RBP33.34■■■□□ 2.93
CPNE1-203ENST00000397442 IL25Q9H293 177 aa33.34■■■□□ 2.93
CPNE1-203ENST00000397442 RFX7Q2KHR2 1363 aa33.34■■■□□ 2.93
CPNE1-203ENST00000397442 KCNA3P22001 575 aa33.33■■■□□ 2.93
CPNE1-203ENST00000397442 POLLQ9UGP5 575 aa33.33■■■□□ 2.93
CPNE1-203ENST00000397442 GGA1Q9UJY5 639 aa33.33■■■□□ 2.93
CPNE1-203ENST00000397442 DUOX1Q9NRD9 1551 aa33.33■■■□□ 2.93
CPNE1-203ENST00000397442 UFL1O94874 794 aa33.33■■■□□ 2.93
CPNE1-203ENST00000397442 SPATA5Q8NB90 893 aa33.33■■■□□ 2.93
CPNE1-203ENST00000397442 TBC1D16Q8TBP0 767 aa33.33■■■□□ 2.93
CPNE1-203ENST00000397442 CYP2E1P05181 493 aaPredicted RBP33.32■■■□□ 2.92
CPNE1-203ENST00000397442 DPEP1P16444 411 aa33.31■■■□□ 2.92
CPNE1-203ENST00000397442 C7orf43Q8WVR3 580 aa33.31■■■□□ 2.92
CPNE1-203ENST00000397442 GPR101Q96P66 508 aaPredicted RBP33.31■■■□□ 2.92
CPNE1-203ENST00000397442 DIAPH3Q9NSV4 1193 aa33.31■■■□□ 2.92
CPNE1-203ENST00000397442 A0A0G2JLW4 131 aa33.3■■■□□ 2.92
CPNE1-203ENST00000397442 COL1A1P02452 1464 aaPredicted RBP33.3■■■□□ 2.92
CPNE1-203ENST00000397442 HIP1O00291 1037 aa33.29■■■□□ 2.92
CPNE1-203ENST00000397442 HIBADHP31937 336 aaKnown RBP33.29■■■□□ 2.92
CPNE1-203ENST00000397442 CWC27Q6UX04 472 aaKnown RBP33.29■■■□□ 2.92
CPNE1-203ENST00000397442 TICAM2Q86XR7 235 aa33.29■■■□□ 2.92
CPNE1-203ENST00000397442 GNL3LQ9NVN8 582 aaKnown RBP33.29■■■□□ 2.92
CPNE1-203ENST00000397442 IQSEC3Q9UPP2 1182 aaPredicted RBP33.29■■■□□ 2.92
CPNE1-203ENST00000397442 VPS37DQ86XT2 251 aa33.29■■■□□ 2.92
CPNE1-203ENST00000397442 MYO5AQ9Y4I1 1855 aaKnown RBP33.28■■■□□ 2.92
CPNE1-203ENST00000397442 ZBTB22O15209 634 aa33.28■■■□□ 2.92
CPNE1-203ENST00000397442 SGSM2O43147 1006 aa33.28■■■□□ 2.92
CPNE1-203ENST00000397442 CHGBP05060 677 aa33.28■■■□□ 2.92
CPNE1-203ENST00000397442 FAM227BQ96M60 508 aa33.28■■■□□ 2.92
CPNE1-203ENST00000397442 TGFB2P61812 414 aa33.27■■■□□ 2.92
CPNE1-203ENST00000397442 NMIQ13287 307 aaPredicted RBP33.27■■■□□ 2.92
CPNE1-203ENST00000397442 MPNDQ8N594 471 aa33.27■■■□□ 2.92
CPNE1-203ENST00000397442 UPF2Q9HAU5 1272 aaKnown RBP33.27■■■□□ 2.92
CPNE1-203ENST00000397442 PIH1D3Q9NQM4 214 aaKnown RBP33.27■■■□□ 2.92
CPNE1-203ENST00000397442 EIF5BO60841 1220 aaKnown RBP33.26■■■□□ 2.92
CPNE1-203ENST00000397442 SNED1Q8TER0 1413 aa33.26■■■□□ 2.92
CPNE1-203ENST00000397442 MED23Q9ULK4 1368 aa33.26■■■□□ 2.91
CPNE1-203ENST00000397442 DOCK2Q92608 1830 aa33.26■■■□□ 2.91
CPNE1-203ENST00000397442 TTF1Q15361 905 aaPredicted RBP33.26■■■□□ 2.91
CPNE1-203ENST00000397442 TBC1D32Q96NH3 1257 aa33.26■■■□□ 2.91
CPNE1-203ENST00000397442 MYH7P12883 1935 aa33.25■■■□□ 2.91
CPNE1-203ENST00000397442 MYH13Q9UKX3 1938 aa33.25■■■□□ 2.91
CPNE1-203ENST00000397442 A0A0D9SFI3 127 aa33.25■■■□□ 2.91
CPNE1-203ENST00000397442 SEMA3EO15041 775 aa33.25■■■□□ 2.91
CPNE1-203ENST00000397442 TTLL6Q8N841 843 aa33.25■■■□□ 2.91
CPNE1-203ENST00000397442 C6orf229H3BNL8 230 aa33.24■■■□□ 2.91
CPNE1-203ENST00000397442 DPP8Q6V1X1 898 aaPredicted RBP33.24■■■□□ 2.91
CPNE1-203ENST00000397442 RUFY2Q8WXA3 655 aa33.24■■■□□ 2.91
CPNE1-203ENST00000397442 TMX4Q9H1E5 349 aaPredicted RBP33.24■■■□□ 2.91
CPNE1-203ENST00000397442 REC8O95072 547 aa33.23■■■□□ 2.91
CPNE1-203ENST00000397442 DENND2AQ9ULE3 1009 aa33.23■■■□□ 2.91
CPNE1-203ENST00000397442 USP26Q9BXU7 913 aa33.23■■■□□ 2.91
CPNE1-203ENST00000397442 PDS5AQ29RF7 1337 aaKnown RBP33.22■■■□□ 2.91
CPNE1-203ENST00000397442 SLFNL1Q499Z3 407 aa33.22■■■□□ 2.91
CPNE1-203ENST00000397442 ZNF804AQ7Z570 1209 aa33.22■■■□□ 2.91
CPNE1-203ENST00000397442 C22orf23Q9BZE7 217 aa33.22■■■□□ 2.91
CPNE1-203ENST00000397442 ZNF219Q9P2Y4 722 aaPredicted RBP33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms