RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 USP17L1Q7RTZ2 530 aa17.54■□□□□ 0.4
SEC13-204ENST00000397099 TNS4Q8IZW8 715 aa17.54■□□□□ 0.4
SEC13-204ENST00000397099 TRPM7Q96QT4 1865 aa17.54■□□□□ 0.4
SEC13-204ENST00000397099 IPO8O15397 1037 aaKnown RBP17.53■□□□□ 0.4
SEC13-204ENST00000397099 GRM1Q13255 1194 aa17.53■□□□□ 0.4
SEC13-204ENST00000397099 RABL6Q3YEC7 729 aaPredicted RBP17.53■□□□□ 0.4
SEC13-204ENST00000397099 RSBN1LQ6PCB5 846 aaPredicted RBP17.53■□□□□ 0.4
SEC13-204ENST00000397099 C15orf52Q6ZUT6 534 aaKnown RBP17.53■□□□□ 0.4
SEC13-204ENST00000397099 GLIS2Q9BZE0 524 aaPredicted RBP17.53■□□□□ 0.4
SEC13-204ENST00000397099 ZNF408Q9H9D4 720 aa17.53■□□□□ 0.4
SEC13-204ENST00000397099 KCNQ5Q9NR82 932 aa17.53■□□□□ 0.4
SEC13-204ENST00000397099 WDR33Q9C0J8 1336 aaKnown RBP17.52■□□□□ 0.4
SEC13-204ENST00000397099 CELF2O95319 508 aaKnown RBP17.52■□□□□ 0.4
SEC13-204ENST00000397099 NBPF7P0C2Y1 421 aaPredicted RBP17.52■□□□□ 0.4
SEC13-204ENST00000397099 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
SEC13-204ENST00000397099 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
SEC13-204ENST00000397099 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
SEC13-204ENST00000397099 TBC1D10BQ4KMP7 808 aaPredicted RBP17.52■□□□□ 0.4
SEC13-204ENST00000397099 CST9Q5W186 159 aa17.52■□□□□ 0.4
SEC13-204ENST00000397099 CNNM1Q9NRU3 951 aa17.52■□□□□ 0.4
SEC13-204ENST00000397099 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 FOXN1O15353 648 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 RBM26Q5T8P6 1007 aaKnown RBP17.51■□□□□ 0.39
SEC13-204ENST00000397099 STRIP1Q5VSL9 837 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 SAMD7Q7Z3H4 446 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 SUCLG2Q96I99 432 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 USP44Q9H0E7 712 aa17.51■□□□□ 0.39
SEC13-204ENST00000397099 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
SEC13-204ENST00000397099 ECE1P42892 770 aa17.5■□□□□ 0.39
SEC13-204ENST00000397099 CAPNS2Q96L46 248 aa17.5■□□□□ 0.39
SEC13-204ENST00000397099 NOB1Q9ULX3 412 aaKnown RBP17.5■□□□□ 0.39
SEC13-204ENST00000397099 CAPN15O75808 1086 aa17.49■□□□□ 0.39
SEC13-204ENST00000397099 ZNF280AP59817 542 aaPredicted RBP17.49■□□□□ 0.39
SEC13-204ENST00000397099 ZNF804AQ7Z570 1209 aa17.49■□□□□ 0.39
SEC13-204ENST00000397099 OGFOD1Q8N543 542 aa17.49■□□□□ 0.39
SEC13-204ENST00000397099 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
SEC13-204ENST00000397099 BICC1Q9H694 974 aaKnown RBP17.49■□□□□ 0.39
SEC13-204ENST00000397099 TLL2Q9Y6L7 1015 aa17.49■□□□□ 0.39
SEC13-204ENST00000397099 USP17L8P0C7I0 530 aa17.48■□□□□ 0.39
SEC13-204ENST00000397099 CTCFP49711 727 aaPredicted RBP17.48■□□□□ 0.39
SEC13-204ENST00000397099 MAP2K1Q02750 393 aaPredicted RBP17.48■□□□□ 0.39
SEC13-204ENST00000397099 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
SEC13-204ENST00000397099 CYP4F22Q6NT55 531 aa17.48■□□□□ 0.39
SEC13-204ENST00000397099 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
SEC13-204ENST00000397099 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
SEC13-204ENST00000397099 EGFRP00533 1210 aa17.47■□□□□ 0.39
SEC13-204ENST00000397099 UBTFL1P0CB47 393 aaPredicted RBP17.47■□□□□ 0.39
SEC13-204ENST00000397099 KIF4BQ2VIQ3 1234 aa17.47■□□□□ 0.39
SEC13-204ENST00000397099 TTLL5Q6EMB2 1281 aa17.47■□□□□ 0.39
SEC13-204ENST00000397099 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
SEC13-204ENST00000397099 GMLQ99445 158 aa17.47■□□□□ 0.39
SEC13-204ENST00000397099 WBP1LQ9NX94 342 aa17.47■□□□□ 0.39
SEC13-204ENST00000397099 DACT2Q5SW24 774 aa17.46■□□□□ 0.39
SEC13-204ENST00000397099 KRT26Q7Z3Y9 468 aa17.46■□□□□ 0.39
SEC13-204ENST00000397099 SAPCD2Q86UD0 394 aa17.46■□□□□ 0.39
SEC13-204ENST00000397099 FBXW7Q969H0 707 aa17.46■□□□□ 0.39
SEC13-204ENST00000397099 BEGAINQ9BUH8 593 aa17.46■□□□□ 0.39
SEC13-204ENST00000397099 CD209Q9NNX6 404 aa17.46■□□□□ 0.39
SEC13-204ENST00000397099 FBXO3Q9UK99 471 aa17.46■□□□□ 0.39
SEC13-204ENST00000397099 WTIPA6NIX2 430 aaPredicted RBP17.45■□□□□ 0.38
SEC13-204ENST00000397099 TAF5LO75529 589 aa17.45■□□□□ 0.38
SEC13-204ENST00000397099 GNAI3P08754 354 aa17.45■□□□□ 0.38
SEC13-204ENST00000397099 IL1R1P14778 569 aa17.45■□□□□ 0.38
SEC13-204ENST00000397099 FKBP1AP62942 108 aaKnown RBP17.45■□□□□ 0.38
SEC13-204ENST00000397099 INTS3Q68E01 1043 aaKnown RBP17.45■□□□□ 0.38
SEC13-204ENST00000397099 ANKRD44Q8N8A2 993 aa17.45■□□□□ 0.38
SEC13-204ENST00000397099 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
SEC13-204ENST00000397099 HDAC9Q9UKV0 1011 aa17.45■□□□□ 0.38
SEC13-204ENST00000397099 RIPOR2Q9Y4F9 1068 aa17.45■□□□□ 0.38
SEC13-204ENST00000397099 PITPNM2Q9BZ72 1349 aa17.45■□□□□ 0.38
SEC13-204ENST00000397099 LBX1P52954 281 aa17.44■□□□□ 0.38
SEC13-204ENST00000397099 TXNRD3Q86VQ6 643 aa17.44■□□□□ 0.38
SEC13-204ENST00000397099 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
SEC13-204ENST00000397099 HHIPL1Q96JK4 782 aa17.44■□□□□ 0.38
SEC13-204ENST00000397099 MYOZ2Q9NPC6 264 aa17.44■□□□□ 0.38
SEC13-204ENST00000397099 PRDM10Q9NQV6 1147 aa17.44■□□□□ 0.38
SEC13-204ENST00000397099 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
SEC13-204ENST00000397099 POLR2AP24928 1970 aaKnown RBP17.44■□□□□ 0.38
SEC13-204ENST00000397099 IRS2Q9Y4H2 1338 aa17.44■□□□□ 0.38
SEC13-204ENST00000397099 ADM5C9JUS6 153 aa17.43■□□□□ 0.38
SEC13-204ENST00000397099 PLIN1O60240 522 aa17.43■□□□□ 0.38
SEC13-204ENST00000397099 DLK2Q6UY11 383 aa17.43■□□□□ 0.38
SEC13-204ENST00000397099 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
SEC13-204ENST00000397099 SULF1Q8IWU6 871 aa17.43■□□□□ 0.38
SEC13-204ENST00000397099 GGA3Q9NZ52 723 aa17.43■□□□□ 0.38
SEC13-204ENST00000397099 AOC2O75106 756 aa17.42■□□□□ 0.38
SEC13-204ENST00000397099 GTF2IP78347 998 aa17.42■□□□□ 0.38
SEC13-204ENST00000397099 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
SEC13-204ENST00000397099 SASH1O94885 1247 aa17.41■□□□□ 0.38
SEC13-204ENST00000397099 PDE8BO95263 885 aa17.41■□□□□ 0.38
SEC13-204ENST00000397099 HIBADHP31937 336 aaKnown RBP17.41■□□□□ 0.38
SEC13-204ENST00000397099 HUNKP57058 714 aa17.41■□□□□ 0.38
SEC13-204ENST00000397099 CAVIN4Q5BKX8 364 aa17.41■□□□□ 0.38
SEC13-204ENST00000397099 ASTN2O75129 1339 aaPredicted RBP17.41■□□□□ 0.38
SEC13-204ENST00000397099 HSPA8P11142 646 aaKnown RBP17.4■□□□□ 0.38
SEC13-204ENST00000397099 KLRK1P26718 216 aa17.4■□□□□ 0.38
SEC13-204ENST00000397099 MAP2K2P36507 400 aa17.4■□□□□ 0.38
SEC13-204ENST00000397099 SCARF1Q14162 830 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 318.4 ms