RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CEP135Q66GS9 1140 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 ZSCAN16Q9H4T2 348 aaPredicted RBP16.36■□□□□ 0.21
NUP98-204ENST00000397004 ABCC6O95255 1503 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 SKILP12757 684 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 TIMM10P62072 90 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
NUP98-204ENST00000397004 SLIT3O75094 1523 aa16.36■□□□□ 0.21
NUP98-204ENST00000397004 DDX58O95786 925 aaKnown RBP16.35■□□□□ 0.21
NUP98-204ENST00000397004 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
NUP98-204ENST00000397004 ANKRD13DQ6ZTN6 518 aa16.35■□□□□ 0.21
NUP98-204ENST00000397004 FMR1NBQ8N0W7 255 aaPredicted RBP16.35■□□□□ 0.21
NUP98-204ENST00000397004 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
NUP98-204ENST00000397004 PCDHA7Q9UN72 937 aa16.35■□□□□ 0.21
NUP98-204ENST00000397004 PDIA3P30101 505 aaKnown RBP16.35■□□□□ 0.21
NUP98-204ENST00000397004 KRT32Q14532 448 aa16.35■□□□□ 0.21
NUP98-204ENST00000397004 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
NUP98-204ENST00000397004 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
NUP98-204ENST00000397004 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
NUP98-204ENST00000397004 AOPEPQ8N6M6 819 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 LMTK3Q96Q04 1460 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 NWD2Q9ULI1 1742 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 FANCGO15287 622 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 DPCR1Q3MIW9 517 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
NUP98-204ENST00000397004 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 GLI3P10071 1580 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
NUP98-204ENST00000397004 A0A1B0GVL5 298 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 E7EWF7 191 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 GOLIM4O00461 696 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 NDUFA8P51970 172 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 FOXO4P98177 505 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 SYCP1Q15431 976 aa16.34■□□□□ 0.21
NUP98-204ENST00000397004 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
NUP98-204ENST00000397004 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.21
NUP98-204ENST00000397004 CCDC112Q8NEF3 446 aa16.33■□□□□ 0.21
NUP98-204ENST00000397004 ZNF446Q9NWS9 450 aa16.33■□□□□ 0.21
NUP98-204ENST00000397004 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
NUP98-204ENST00000397004 STX1AQ16623 288 aa16.33■□□□□ 0.2
NUP98-204ENST00000397004 CCAR2Q8N163 923 aaKnown RBP16.33■□□□□ 0.2
NUP98-204ENST00000397004 ST7Q9NRC1 585 aa16.33■□□□□ 0.2
NUP98-204ENST00000397004 PAXBP1Q9Y5B6 917 aa16.33■□□□□ 0.2
NUP98-204ENST00000397004 CLIC4Q9Y696 253 aa16.33■□□□□ 0.2
NUP98-204ENST00000397004 KDM4FA0A1W2PPD8 638 aa16.33■□□□□ 0.2
NUP98-204ENST00000397004 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.2
NUP98-204ENST00000397004 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
NUP98-204ENST00000397004 ARFGEF2Q9Y6D5 1785 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 ARMCX5Q6P1M9 558 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 LLPHQ9BRT6 129 aaKnown RBP16.32■□□□□ 0.2
NUP98-204ENST00000397004 OGFRQ9NZT2 677 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 ALS2Q96Q42 1657 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 FAM160A1Q05DH4 1040 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 LMBR1LQ6UX01 489 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 FSIP1Q8NA03 581 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 MEGF6O75095 1541 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 M0R2C6 588 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 FBXO38Q6PIJ6 1188 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 FAM53CQ9NYF3 392 aa16.32■□□□□ 0.2
NUP98-204ENST00000397004 MST1RQ04912 1400 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 CARMIL3Q8ND23 1372 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 MAST3O60307 1309 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 A0A087WZG4 1122 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 SLFN14P0C7P3 912 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 LMOD2Q6P5Q4 547 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 FEZ1Q99689 392 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 HDAC5Q9UQL6 1122 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
NUP98-204ENST00000397004 PHKG2P15735 406 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
NUP98-204ENST00000397004 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
NUP98-204ENST00000397004 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
NUP98-204ENST00000397004 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 GOLGA6L19H0YKK7 550 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 NCAPHQ15003 741 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 ELF2Q15723 593 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 ME1P48163 572 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 ZMYM1Q5SVZ6 1142 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 RFX7Q2KHR2 1363 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 PTPN21Q16825 1174 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
NUP98-204ENST00000397004 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 NBPF14Q5TI25 921 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
NUP98-204ENST00000397004 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 HPS5Q9UPZ3 1129 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 CYP27B1O15528 508 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
NUP98-204ENST00000397004 PTPN14Q15678 1187 aa16.29■□□□□ 0.2
NUP98-204ENST00000397004 PUS3Q9BZE2 481 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms