RNA–Protein interactions for RNA: ENST00000395788.3

C6orf48-208, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-208ENST00000395788 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
C6orf48-208ENST00000395788 ELL2O00472 640 aaPredicted RBP7.64□□□□□ -1.19
C6orf48-208ENST00000395788 ZBTB7BO15156 539 aaPredicted RBP7.64□□□□□ -1.19
C6orf48-208ENST00000395788 HDAC1Q13547 482 aaPredicted RBP7.64□□□□□ -1.19
C6orf48-208ENST00000395788 CHRNA2Q15822 529 aa7.64□□□□□ -1.19
C6orf48-208ENST00000395788 INTS3Q68E01 1043 aaKnown RBP7.64□□□□□ -1.19
C6orf48-208ENST00000395788 CHMP4BQ9H444 224 aaKnown RBP7.64□□□□□ -1.19
C6orf48-208ENST00000395788 MIS18AQ9NYP9 233 aa7.64□□□□□ -1.19
C6orf48-208ENST00000395788 KDM6AO15550 1401 aaPredicted RBP7.63□□□□□ -1.19
C6orf48-208ENST00000395788 BTBD11A6QL63 1104 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 TATP17735 454 aaPredicted RBP7.63□□□□□ -1.19
C6orf48-208ENST00000395788 FSHRP23945 695 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 EIF4A1P60842 406 aaKnown RBP7.63□□□□□ -1.19
C6orf48-208ENST00000395788 C1orf141Q5JVX7 400 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 RAPGEF4Q8WZA2 1011 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 CARD10Q9BWT7 1032 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 PRDM11Q9NQV5 511 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 NLRP2Q9NX02 1062 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 SPG7Q9UQ90 795 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 MAP4K5Q9Y4K4 846 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 SIPA1L3O60292 1781 aaPredicted RBP7.63□□□□□ -1.19
C6orf48-208ENST00000395788 ROBO1Q9Y6N7 1651 aa7.63□□□□□ -1.19
C6orf48-208ENST00000395788 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
C6orf48-208ENST00000395788 PHKG2P15735 406 aa7.62□□□□□ -1.19
C6orf48-208ENST00000395788 CTHP32929 405 aa7.62□□□□□ -1.19
C6orf48-208ENST00000395788 CCDC30Q5VVM6 783 aa7.62□□□□□ -1.19
C6orf48-208ENST00000395788 ITPRIPQ8IWB1 547 aa7.62□□□□□ -1.19
C6orf48-208ENST00000395788 CHMP4AQ9BY43 222 aa7.62□□□□□ -1.19
C6orf48-208ENST00000395788 RWDD1Q9H446 243 aaPredicted RBP7.62□□□□□ -1.19
C6orf48-208ENST00000395788 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
C6orf48-208ENST00000395788 PARP4Q9UKK3 1724 aaKnown RBP7.61□□□□□ -1.19
C6orf48-208ENST00000395788 KRBA1A5PL33 1030 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 CYP27B1O15528 508 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 BCRP11274 1271 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 MPRIPQ6WCQ1 1025 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 Q6ZVU0 165 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 BPHLQ86WA6 291 aaPredicted RBP7.61□□□□□ -1.19
C6orf48-208ENST00000395788 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 IFNL2Q8IZJ0 200 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 C1QTNF2Q9BXJ5 285 aa7.61□□□□□ -1.19
C6orf48-208ENST00000395788 FAM217BQ9NTX9 383 aaPredicted RBP7.61□□□□□ -1.19
C6orf48-208ENST00000395788 COL16A1Q07092 1604 aaPredicted RBP7.6□□□□□ -1.19
C6orf48-208ENST00000395788 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 KCNQ3O43525 872 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 HSP90AB1P08238 724 aaKnown RBP7.6□□□□□ -1.19
C6orf48-208ENST00000395788 CSB-PGBD3P0DP91 1061 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 TEFQ10587 303 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 MAP2K5Q13163 448 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 AGERQ15109 404 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 LYPD8Q6UX82 237 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 G2E3Q7L622 706 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 HOMEZQ8IX15 550 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 CCDC116Q8IYX3 515 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 VSIG10Q8N0Z9 540 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 NEDD1Q8NHV4 660 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 SLC52A2Q9HAB3 445 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 SCN11AQ9UI33 1791 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 PXDNLA1KZ92 1463 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 DISP2A7MBM2 1401 aa7.6□□□□□ -1.19
C6orf48-208ENST00000395788 COL14A1Q05707 1796 aaKnown RBP7.59□□□□□ -1.19
C6orf48-208ENST00000395788 CACNA1FO60840 1977 aa7.59□□□□□ -1.19
C6orf48-208ENST00000395788 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
C6orf48-208ENST00000395788 FLIIQ13045 1269 aa7.59□□□□□ -1.19
C6orf48-208ENST00000395788 STK31Q9BXU1 1019 aa7.59□□□□□ -1.19
C6orf48-208ENST00000395788 IBTKQ9P2D0 1353 aaPredicted RBP7.59□□□□□ -1.2
C6orf48-208ENST00000395788 PCDH11XQ9BZA7 1347 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 PCDH11YQ9BZA8 1340 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 F12P00748 615 aaPredicted RBP7.58□□□□□ -1.2
C6orf48-208ENST00000395788 IL2RBP14784 551 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 CCT4P50991 539 aaKnown RBP7.58□□□□□ -1.2
C6orf48-208ENST00000395788 HDGFL1Q5TGJ6 251 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 LARP1Q6PKG0 1096 aaKnown RBP7.58□□□□□ -1.2
C6orf48-208ENST00000395788 TOM1L2Q6ZVM7 507 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 GPIHBP1Q8IV16 184 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 SIRT2Q8IXJ6 389 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 ZCRB1Q8TBF4 217 aaKnown RBP7.58□□□□□ -1.2
C6orf48-208ENST00000395788 BACH2Q9BYV9 841 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 GPCPD1Q9NPB8 672 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 LRRC4BQ9NT99 713 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 ATP10DQ9P241 1426 aa7.58□□□□□ -1.2
C6orf48-208ENST00000395788 N4BP2Q86UW6 1770 aaPredicted RBP7.58□□□□□ -1.2
C6orf48-208ENST00000395788 VIRMAQ69YN4 1812 aaKnown RBP7.57□□□□□ -1.2
C6orf48-208ENST00000395788 ERVV-2B6SEH9 535 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
C6orf48-208ENST00000395788 TOM1O60784 492 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 CTSOP43234 321 aaPredicted RBP7.57□□□□□ -1.2
C6orf48-208ENST00000395788 CBLBQ13191 982 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 MTMR2Q13614 643 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 ZNF790Q6PG37 636 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 ALYREFQ86V81 257 aaKnown RBP7.57□□□□□ -1.2
C6orf48-208ENST00000395788 SKAP1Q86WV1 359 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 TRMT44Q8IYL2 757 aaKnown RBP7.57□□□□□ -1.2
C6orf48-208ENST00000395788 MAP10Q9P2G4 905 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 GLI3P10071 1580 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 SHANK3Q9BYB0 1731 aa7.57□□□□□ -1.2
C6orf48-208ENST00000395788 TNS2Q63HR2 1409 aa7.56□□□□□ -1.2
C6orf48-208ENST00000395788 IRF6O14896 467 aa7.56□□□□□ -1.2
C6orf48-208ENST00000395788 ITGB7P26010 798 aa7.56□□□□□ -1.2
C6orf48-208ENST00000395788 NUCB1Q02818 461 aa7.56□□□□□ -1.2
C6orf48-208ENST00000395788 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms