RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GNPATO15228 680 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 SNW1Q13573 536 aaKnown RBP11.83□□□□□ -0.52
COL4A6-203ENST00000394872 IMPG2Q9BZV3 1241 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL4A6-203ENST00000394872 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 RRP9O43818 475 aaKnown RBP11.83□□□□□ -0.52
COL4A6-203ENST00000394872 AKR1B10O60218 316 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 C19orf44Q9H6X5 657 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 PLCH2O75038 1416 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 DPH6Q7L8W6 267 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 IKBKGQ9Y6K9 419 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 MAP3K1Q13233 1512 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 TNNI2P48788 182 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 MRPS9P82933 396 aaKnown RBP11.83□□□□□ -0.52
COL4A6-203ENST00000394872 ESYT1Q9BSJ8 1104 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 ZBTB21Q9ULJ3 1066 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 GJA3Q9Y6H8 435 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 ITSN2Q9NZM3 1697 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 FLT4P35916 1363 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 MAP3K5Q99683 1374 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 RNF113AO15541 343 aaKnown RBP11.83□□□□□ -0.52
COL4A6-203ENST00000394872 FAM13AO94988 1023 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 RNF187Q5TA31 235 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-203ENST00000394872 CTAGE1Q96RT6 745 aa11.83□□□□□ -0.52
COL4A6-203ENST00000394872 KRT2P35908 639 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 UBASH3AP57075 661 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 KIAA0753Q2KHM9 967 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 TTC12Q9H892 705 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-203ENST00000394872 MARCKSP29966 332 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-203ENST00000394872 HSPA2P54652 639 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-203ENST00000394872 CTR9Q6PD62 1173 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 ABCC1P33527 1531 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 FERP16591 822 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-203ENST00000394872 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 DCAF5Q96JK2 942 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 PLVAPQ9BX97 442 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 BTG4Q9NY30 223 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 POLR3GO15318 223 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-203ENST00000394872 CCDC175P0C221 793 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 TFCP2Q12800 502 aa11.82□□□□□ -0.52
COL4A6-203ENST00000394872 CWF19L2Q2TBE0 894 aaKnown RBP11.82□□□□□ -0.52
COL4A6-203ENST00000394872 GIMAP6Q6P9H5 292 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 MICALCLQ6ZW33 695 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 GPATCH8Q9UKJ3 1502 aaKnown RBP11.81□□□□□ -0.52
COL4A6-203ENST00000394872 CALML3P27482 149 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 HSP90AA4PQ58FG1 418 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 ZNF518AQ6AHZ1 1483 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 DHX58Q96C10 678 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 PSMA7O14818 248 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 KRT79Q5XKE5 535 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 LINS1Q8NG48 757 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 PPP1R14CQ8TAE6 165 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 BIN2Q9UBW5 565 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-203ENST00000394872 CNPY2Q9Y2B0 182 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 CYLC1P35663 651 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-203ENST00000394872 CEP63Q96MT8 703 aa11.81□□□□□ -0.52
COL4A6-203ENST00000394872 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
COL4A6-203ENST00000394872 SAP30BPQ9UHR5 308 aaKnown RBP11.8□□□□□ -0.52
COL4A6-203ENST00000394872 GJC1P36383 396 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 SP4Q02446 784 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 TRIM75PA6NK02 468 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 CAVIN2O95810 425 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 GCP02774 474 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 OTUD6BQ8N6M0 293 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 GNG11P61952 73 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 TMEM110-MUSTN1A8MSY1 372 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
COL4A6-203ENST00000394872 MCM7P33993 719 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 CBX1P83916 185 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 UVSSAQ2YD98 709 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 CNBD1Q8NA66 436 aa11.8□□□□□ -0.52
COL4A6-203ENST00000394872 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-203ENST00000394872 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 CEP135Q66GS9 1140 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 POLKQ9UBT6 870 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 RAB3GAP1Q15042 981 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 DDX12PQ92771 950 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 TBC1D32Q96NH3 1257 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
COL4A6-203ENST00000394872 TTC41PQ6P2S7 1318 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 BACH1O14867 736 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 EEF2P13639 858 aaKnown RBP11.79□□□□□ -0.52
COL4A6-203ENST00000394872 SELENOOQ9BVL4 669 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 ZSWIM4Q9H7M6 989 aa11.79□□□□□ -0.52
COL4A6-203ENST00000394872 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL4A6-203ENST00000394872 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
COL4A6-203ENST00000394872 GNA11P29992 359 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 ARL1P40616 181 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms