RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 MIIPQ5JXC2 388 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 MRGPRGQ86SM5 289 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 FBXO11Q86XK2 927 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 CLEC10AQ8IUN9 316 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ZNF513Q8N8E2 541 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 TP53I13Q8NBR0 393 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 PI4K2BQ8TCG2 481 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ZNF592Q92610 1267 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ZNF341Q9BYN7 854 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 KCNH6Q9H252 994 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 MMRN2Q9H8L6 949 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 EMILIN1Q9Y6C2 1016 aa-0.84□□□□□ -2.54
RNU6-1340P-201ENST00000384438 F8W735 103 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 RFXAPO00287 272 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ZNF202O95125 648 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CD8BP10966 210 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 RGS3P49796 1198 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MVKQ03426 396 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 HIC1Q14526 733 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 VMACQ2NL98 169 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KMT5BQ4FZB7 885 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 TYW1BQ6NUM6 668 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 LYSMD3Q7Z3D4 306 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ADAMTS15Q8TE58 950 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 WACQ9BTA9 647 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SSBP3Q9BWW4 388 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 QTRT2Q9H974 415 aaKnown RBP-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CYLDQ9NQC7 956 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PNMA3Q9UL41 463 aa-0.85□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CYP26A1O43174 497 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 WISP1O95388 367 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 RHOQP17081 205 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ALAS2P22557 587 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FECHP22830 423 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 VARSP26640 1264 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MCM7P33993 719 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 BNIP3Q12983 259 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FOXE3Q13461 319 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FHL1Q13642 323 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 TMEM67Q5HYA8 995 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KANK4Q5T7N3 995 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 HEATR6Q6AI08 1181 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 STK11IPQ8N1F8 1099 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SERBP1Q8NC51 408 aaKnown RBP eCLIP-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 RGMAQ96B86 450 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ABHD17AQ96GS6 310 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 UHRF2Q96PU4 802 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SRCIN1Q9C0H9 1055 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 GCM1Q9NP62 436 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ATG3Q9NT62 314 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ZC3H7BQ9UGR2 993 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KCNH4Q9UQ05 1017 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CTNND2Q9UQB3 1225 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 WBP11Q9Y2W2 641 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 DUSP10Q9Y6W6 482 aa-0.86□□□□□ -2.55
RNU6-1340P-201ENST00000384438 BNIP3LO60238 219 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PRB2P02812 416 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CHRM1P11229 460 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KRT4P19013 534 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 AFMP43652 599 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 DDR1Q08345 913 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 R3HDM1Q15032 1099 aaKnown RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MIDNQ504T8 468 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 USPL1Q5W0Q7 1092 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ARHGAP27Q6ZUM4 889 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CHST13Q8NET6 341 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 NEU4Q8WWR8 484 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ZNF503Q96F45 646 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MFSD14AQ96MC6 490 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CDK5RAP1Q96SZ6 601 aaKnown RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 GAS2L1Q99501 681 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 EPB41L4AQ9HCS5 686 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 POLMQ9NP87 494 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 DISC1Q9NRI5 854 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MRPS18AQ9NVS2 196 aaKnown RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ST6GALNAC2Q9UJ37 374 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PHF8Q9UPP1 1060 aa-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SALL2Q9Y467 1007 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MUC2Q02817 5179 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 TMEM129A0AVI4 362 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MYADML2A6NDP7 307 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 DNAJC9-AS1A6NH13 148 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ADARB2-AS1A8MUL3 147 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 NBPF26B4DH59 902 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 GDF10P55107 478 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 XGP55808 180 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MAP3K9P80192 1104 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FOXF2Q12947 444 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KRTAP13-4Q3LI77 160 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PUS10Q3MIT2 529 aaKnown RBP-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 GFI1BQ5VTD9 330 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KHDRBS2Q5VWX1 349 aaKnown RBP-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 BRICD5Q6PL45 260 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 Q6ZPA2 131 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 DTWD1Q8N5C7 304 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 LINC01356Q8N9X3 169 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 EZH1Q92800 747 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 OSBPL1AQ9BXW6 950 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MCOLN1Q9GZU1 580 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KLC2Q9H0B6 622 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms