RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 UBASH3AP57075 661 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 DPCR1Q3MIW9 517 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 BICDL1Q6ZP65 573 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 COPS6Q7L5N1 327 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 UBE3BQ7Z3V4 1068 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 CPLX3Q8WVH0 158 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 TM6SF1Q9BZW5 370 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 SNRKQ9NRH2 765 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 ZNF446Q9NWS9 450 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 HDAC5Q9UQL6 1122 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 EDC4Q6P2E9 1401 aaKnown RBP14.06□□□□□ -0.16
SF1-204ENST00000377390 CCZ1BP86790 482 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 CCZ1P86791 482 aaPredicted RBP14.06□□□□□ -0.16
SF1-204ENST00000377390 IQCB1Q15051 598 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 CCDC102AQ96A19 550 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 EAF2Q96CJ1 260 aaPredicted RBP14.06□□□□□ -0.16
SF1-204ENST00000377390 ARFGAP3Q9NP61 516 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 ELP1O95163 1332 aa14.06□□□□□ -0.16
SF1-204ENST00000377390 TOP1P11387 765 aaKnown RBP14.05□□□□□ -0.16
SF1-204ENST00000377390 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
SF1-204ENST00000377390 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
SF1-204ENST00000377390 ERC1Q8IUD2 1116 aa14.05□□□□□ -0.16
SF1-204ENST00000377390 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
SF1-204ENST00000377390 PTPDC1A2A3K4 754 aa14.05□□□□□ -0.16
SF1-204ENST00000377390 CASQ1P31415 396 aa14.05□□□□□ -0.16
SF1-204ENST00000377390 SMC1AQ14683 1233 aaKnown RBP14.05□□□□□ -0.16
SF1-204ENST00000377390 GOLPH3LQ9H4A5 285 aa14.05□□□□□ -0.16
SF1-204ENST00000377390 PUF60Q9UHX1 559 aaKnown RBP14.05□□□□□ -0.16
SF1-204ENST00000377390 UTRNP46939 3433 aa14.05□□□□□ -0.16
SF1-204ENST00000377390 HAND2P61296 217 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 E4F1Q66K89 784 aaPredicted RBP14.04□□□□□ -0.16
SF1-204ENST00000377390 DHX37Q8IY37 1157 aaKnown RBP14.04□□□□□ -0.16
SF1-204ENST00000377390 MRPS27Q92552 414 aaKnown RBP14.04□□□□□ -0.16
SF1-204ENST00000377390 MAP4K1Q92918 833 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 SRRTQ9BXP5 876 aaKnown RBP14.04□□□□□ -0.16
SF1-204ENST00000377390 VPS18Q9P253 973 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 AOX1Q06278 1338 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 TTC41PQ6P2S7 1318 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 DHX16O60231 1041 aaKnown RBP14.04□□□□□ -0.16
SF1-204ENST00000377390 ETF1P62495 437 aaKnown RBP14.04□□□□□ -0.16
SF1-204ENST00000377390 FAM160A1Q05DH4 1040 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 FLT4P35916 1363 aa14.04□□□□□ -0.16
SF1-204ENST00000377390 TOB2Q14106 344 aaPredicted RBP14.03□□□□□ -0.16
SF1-204ENST00000377390 NYAP1Q6ZVC0 841 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 CCDC150Q8NCX0 1101 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 PTPRUQ92729 1446 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.03□□□□□ -0.16
SF1-204ENST00000377390 PLEKHG3A1L390 1219 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 A1BGP04217 495 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 ATP1A3P13637 1013 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 KRT32Q14532 448 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 SLFNL1Q499Z3 407 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
SF1-204ENST00000377390 RABEP2Q9H5N1 569 aa14.03□□□□□ -0.16
SF1-204ENST00000377390 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.16
SF1-204ENST00000377390 OLFM4Q6UX06 510 aa14.02□□□□□ -0.16
SF1-204ENST00000377390 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.16
SF1-204ENST00000377390 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.17
SF1-204ENST00000377390 PLA2G4AP47712 749 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 FANCCQ00597 558 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
SF1-204ENST00000377390 NDUFA8P51970 172 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 SCRN1Q12765 414 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 RESTQ13127 1097 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 TTC31Q49AM3 519 aaPredicted RBP14.02□□□□□ -0.17
SF1-204ENST00000377390 LZTFL1Q9NQ48 299 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 GJB4Q9NTQ9 266 aa14.02□□□□□ -0.17
SF1-204ENST00000377390 RRP15Q9Y3B9 282 aaKnown RBP14.02□□□□□ -0.17
SF1-204ENST00000377390 EPB41L2O43491 1005 aaKnown RBP14.01□□□□□ -0.17
SF1-204ENST00000377390 WASHC4Q2M389 1173 aa14.01□□□□□ -0.17
SF1-204ENST00000377390 ARMCX5Q6P1M9 558 aa14.01□□□□□ -0.17
SF1-204ENST00000377390 DHX40Q8IX18 779 aaKnown RBP14.01□□□□□ -0.17
SF1-204ENST00000377390 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
SF1-204ENST00000377390 C8orf76Q96K31 380 aa14.01□□□□□ -0.17
SF1-204ENST00000377390 DESI2Q9BSY9 194 aa14.01□□□□□ -0.17
SF1-204ENST00000377390 FHOD1Q9Y613 1164 aa14.01□□□□□ -0.17
SF1-204ENST00000377390 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
SF1-204ENST00000377390 SLC4A8Q2Y0W8 1093 aa14□□□□□ -0.17
SF1-204ENST00000377390 PCDHA7Q9UN72 937 aa14□□□□□ -0.17
SF1-204ENST00000377390 CPSF1Q10570 1443 aaKnown RBP14□□□□□ -0.17
SF1-204ENST00000377390 TTC21AQ8NDW8 1320 aa14□□□□□ -0.17
SF1-204ENST00000377390 ZNF594Q96JF6 807 aaPredicted RBP14□□□□□ -0.17
SF1-204ENST00000377390 BICC1Q9H694 974 aaKnown RBP14□□□□□ -0.17
SF1-204ENST00000377390 TULP2O00295 520 aa14□□□□□ -0.17
SF1-204ENST00000377390 PES1O00541 588 aaKnown RBP14□□□□□ -0.17
SF1-204ENST00000377390 CCP110O43303 1012 aa14□□□□□ -0.17
SF1-204ENST00000377390 RHOXF2BP0C7M4 288 aa14□□□□□ -0.17
SF1-204ENST00000377390 RHOXF2Q9BQY4 288 aa14□□□□□ -0.17
SF1-204ENST00000377390 ORC3Q9UBD5 711 aaPredicted RBP14□□□□□ -0.17
SF1-204ENST00000377390 IQSEC3Q9UPP2 1182 aaPredicted RBP14□□□□□ -0.17
SF1-204ENST00000377390 CD163L1Q9NR16 1453 aa14□□□□□ -0.17
SF1-204ENST00000377390 REREQ9P2R6 1566 aa14□□□□□ -0.17
SF1-204ENST00000377390 USP6P35125 1406 aa13.99□□□□□ -0.17
SF1-204ENST00000377390 ZSCAN12O43309 604 aa13.99□□□□□ -0.17
SF1-204ENST00000377390 CDC25BP30305 580 aa13.99□□□□□ -0.17
SF1-204ENST00000377390 FAM193AP78312 1265 aa13.99□□□□□ -0.17
SF1-204ENST00000377390 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms