RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PCDH11XQ9BZA7 1347 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 PCDH11YQ9BZA8 1340 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 GOLIM4O00461 696 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
ABCF1-202ENST00000376545 CDC25BP30305 580 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 FAM13BQ9NYF5 915 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
ABCF1-202ENST00000376545 TIMM10P62072 90 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 SNW1Q13573 536 aaKnown RBP12.56□□□□□ -0.4
ABCF1-202ENST00000376545 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 HSP90B1P14625 803 aaKnown RBP12.56□□□□□ -0.4
ABCF1-202ENST00000376545 ZNF75DP51815 510 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 LRRC24Q50LG9 513 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 SARM1Q6SZW1 724 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 ENGASEQ8NFI3 743 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 DDX11Q96FC9 970 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 WDR17Q8IZU2 1322 aa12.56□□□□□ -0.4
ABCF1-202ENST00000376545 PTPDC1A2A3K4 754 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 H3BQV1 296 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 C4AP0C0L4 1744 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 C4BP0C0L5 1744 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 PDIA3P30101 505 aaKnown RBP12.55□□□□□ -0.4
ABCF1-202ENST00000376545 IQCB1Q15051 598 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
ABCF1-202ENST00000376545 LRRC2Q9BYS8 371 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 CTAGE5O15320 804 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 FOXP2O15409 715 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 ABCC12Q96J65 1359 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 A0A0G2JLW4 131 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 A0A1B0GUL7 405 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 CHMP4CQ96CF2 233 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 NEUROD6Q96NK8 337 aa12.55□□□□□ -0.4
ABCF1-202ENST00000376545 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
ABCF1-202ENST00000376545 M0R2C6 588 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 ZNF165P49910 485 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 DNTTIP2Q5QJE6 756 aaKnown RBP12.54□□□□□ -0.4
ABCF1-202ENST00000376545 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 SPC24Q8NBT2 197 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
ABCF1-202ENST00000376545 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 KIF3AQ9Y496 699 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 IFIT1P09914 478 aaKnown RBP12.54□□□□□ -0.4
ABCF1-202ENST00000376545 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
ABCF1-202ENST00000376545 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
ABCF1-202ENST00000376545 A1BGP04217 495 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 FDPSP14324 419 aaKnown RBP12.53□□□□□ -0.4
ABCF1-202ENST00000376545 PTGS1P23219 599 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 GOLPH3LQ9H4A5 285 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 CARMIL3Q8ND23 1372 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
ABCF1-202ENST00000376545 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 DNAJC25Q9H1X3 360 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
ABCF1-202ENST00000376545 PUS3Q9BZE2 481 aaKnown RBP12.53□□□□□ -0.4
ABCF1-202ENST00000376545 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.4
ABCF1-202ENST00000376545 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.4
ABCF1-202ENST00000376545 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.4
ABCF1-202ENST00000376545 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.4
ABCF1-202ENST00000376545 ANKRD36CQ5JPF3 1778 aa12.52□□□□□ -0.41
ABCF1-202ENST00000376545 CTIFO43310 598 aaKnown RBP12.52□□□□□ -0.41
ABCF1-202ENST00000376545 CSF1RP07333 972 aa12.52□□□□□ -0.41
ABCF1-202ENST00000376545 ZFYP08048 801 aaPredicted RBP12.52□□□□□ -0.41
ABCF1-202ENST00000376545 ZSCAN25Q6NSZ9 544 aa12.52□□□□□ -0.41
ABCF1-202ENST00000376545 WDR19Q8NEZ3 1342 aa12.52□□□□□ -0.41
ABCF1-202ENST00000376545 MRFAP1L1Q96HT8 127 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 RTEL1Q9NZ71 1219 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 FAM160A1Q05DH4 1040 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 STX1AQ16623 288 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 FTOQ9C0B1 505 aaKnown RBP eCLIP12.51□□□□□ -0.416e-7■■■□□ 15
ABCF1-202ENST00000376545 MYH3P11055 1940 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
ABCF1-202ENST00000376545 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
ABCF1-202ENST00000376545 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
ABCF1-202ENST00000376545 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
ABCF1-202ENST00000376545 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 NCOA5Q9HCD5 579 aaKnown RBP12.51□□□□□ -0.41
ABCF1-202ENST00000376545 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 AKAP2Q9Y2D5 859 aa12.51□□□□□ -0.41
ABCF1-202ENST00000376545 A0A1W2PQ27 194 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 A0A1W2PQ64 194 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 A0A1W2PQD8 194 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 DHX40Q8IX18 779 aaKnown RBP12.5□□□□□ -0.41
ABCF1-202ENST00000376545 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
ABCF1-202ENST00000376545 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 CEP126Q9P2H0 1117 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 ATRNO75882 1429 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms