RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 CCDC24Q8N4L8 307 aa15.85■□□□□ 0.13
A1CF-204ENST00000373997 XAGE2Q96GT9 111 aa15.85■□□□□ 0.13
A1CF-204ENST00000373997 MPHOSPH8Q99549 860 aa15.85■□□□□ 0.13
A1CF-204ENST00000373997 HAUS7Q99871 368 aa15.85■□□□□ 0.13
A1CF-204ENST00000373997 NYXQ9GZU5 481 aa15.85■□□□□ 0.13
A1CF-204ENST00000373997 NMIQ13287 307 aaPredicted RBP15.84■□□□□ 0.13
A1CF-204ENST00000373997 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
A1CF-204ENST00000373997 HELBQ8NG08 1087 aaPredicted RBP15.84■□□□□ 0.13
A1CF-204ENST00000373997 RUFY2Q8WXA3 655 aa15.84■□□□□ 0.13
A1CF-204ENST00000373997 RTL9Q8NET4 1388 aa15.84■□□□□ 0.13
A1CF-204ENST00000373997 OFD1O75665 1012 aa15.83■□□□□ 0.13
A1CF-204ENST00000373997 IFIT1P09914 478 aaKnown RBP15.83■□□□□ 0.13
A1CF-204ENST00000373997 TERF1P54274 439 aa15.83■□□□□ 0.13
A1CF-204ENST00000373997 TTC39AQ5SRH9 613 aa15.83■□□□□ 0.13
A1CF-204ENST00000373997 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.83■□□□□ 0.13
A1CF-204ENST00000373997 VGLL2Q8N8G2 317 aa15.83■□□□□ 0.13
A1CF-204ENST00000373997 FAM227BQ96M60 508 aa15.83■□□□□ 0.13
A1CF-204ENST00000373997 TMEM63CQ9P1W3 806 aa15.83■□□□□ 0.13
A1CF-204ENST00000373997 PALD1Q9ULE6 856 aa15.83■□□□□ 0.13
A1CF-204ENST00000373997 NOL7Q9UMY1 257 aaKnown RBP15.83■□□□□ 0.13
A1CF-204ENST00000373997 HIP1O00291 1037 aa15.83■□□□□ 0.12
A1CF-204ENST00000373997 NPHP1O15259 732 aa15.83■□□□□ 0.12
A1CF-204ENST00000373997 ADRA2BP18089 450 aa15.83■□□□□ 0.12
A1CF-204ENST00000373997 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.12
A1CF-204ENST00000373997 SYAP1Q96A49 352 aaPredicted RBP15.83■□□□□ 0.12
A1CF-204ENST00000373997 RBM27Q9P2N5 1060 aaKnown RBP15.83■□□□□ 0.12
A1CF-204ENST00000373997 RGS17Q9UGC6 210 aaPredicted RBP15.83■□□□□ 0.12
A1CF-204ENST00000373997 A0A0D9SFI3 127 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 GOLIM4O00461 696 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 APBA3O96018 575 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 CCDC158Q5M9N0 1113 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 PROM2Q8N271 834 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 MROH5Q6ZUA9 1318 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 PDE8BO95263 885 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 MCM5P33992 734 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 POTEAQ6S8J7 498 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 KIAA1211Q6ZU35 1233 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 LSG1Q9H089 658 aaKnown RBP15.82■□□□□ 0.12
A1CF-204ENST00000373997 PAG1Q9NWQ8 432 aa15.82■□□□□ 0.12
A1CF-204ENST00000373997 RAD50Q92878 1312 aa15.81■□□□□ 0.12
A1CF-204ENST00000373997 CARMIL3Q8ND23 1372 aa15.81■□□□□ 0.12
A1CF-204ENST00000373997 ZNF500O60304 480 aaPredicted RBP15.81■□□□□ 0.12
A1CF-204ENST00000373997 HSPA4P34932 840 aa15.81■□□□□ 0.12
A1CF-204ENST00000373997 RGPD3A6NKT7 1758 aaPredicted RBP15.81■□□□□ 0.12
A1CF-204ENST00000373997 RGPD4Q7Z3J3 1758 aa15.81■□□□□ 0.12
A1CF-204ENST00000373997 MYH13Q9UKX3 1938 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 TAF5LO75529 589 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 NFIXQ14938 502 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 TPTE2Q6XPS3 522 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
A1CF-204ENST00000373997 SNRKQ9NRH2 765 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
A1CF-204ENST00000373997 SYCE3A1L190 88 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 CHGBP05060 677 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
A1CF-204ENST00000373997 SF3B3Q15393 1217 aaKnown RBP15.8■□□□□ 0.12
A1CF-204ENST00000373997 PUM3Q15397 648 aaKnown RBP15.8■□□□□ 0.12
A1CF-204ENST00000373997 FBXO41Q8TF61 875 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 RFX7Q2KHR2 1363 aa15.8■□□□□ 0.12
A1CF-204ENST00000373997 SNAP23O00161 211 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
A1CF-204ENST00000373997 GLIPR1L2Q4G1C9 344 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 KBTBD3Q8NAB2 608 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 GYS1P13807 737 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 PTH1RQ03431 593 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 SCARF1Q14162 830 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.79■□□□□ 0.12
A1CF-204ENST00000373997 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
A1CF-204ENST00000373997 ZNF827Q17R98 1081 aa15.78■□□□□ 0.12
A1CF-204ENST00000373997 PI16Q6UXB8 463 aa15.78■□□□□ 0.12
A1CF-204ENST00000373997 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
A1CF-204ENST00000373997 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
A1CF-204ENST00000373997 CCDC171Q6TFL3 1326 aa15.78■□□□□ 0.12
A1CF-204ENST00000373997 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
A1CF-204ENST00000373997 PLSCR1O15162 318 aa15.77■□□□□ 0.12
A1CF-204ENST00000373997 SLC5A1P13866 664 aa15.77■□□□□ 0.12
A1CF-204ENST00000373997 CHRNDQ07001 517 aa15.77■□□□□ 0.12
A1CF-204ENST00000373997 ZNF589Q86UQ0 364 aaPredicted RBP15.77■□□□□ 0.12
A1CF-204ENST00000373997 CNBD1Q8NA66 436 aa15.77■□□□□ 0.12
A1CF-204ENST00000373997 LPIN2Q92539 896 aa15.77■□□□□ 0.12
A1CF-204ENST00000373997 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.12
A1CF-204ENST00000373997 DOCK2Q92608 1830 aa15.77■□□□□ 0.12
A1CF-204ENST00000373997 FGFR2P21802 821 aa15.77■□□□□ 0.11
A1CF-204ENST00000373997 PHKA1P46020 1223 aa15.77■□□□□ 0.11
A1CF-204ENST00000373997 FOXD4L5Q5VV16 416 aaPredicted RBP15.77■□□□□ 0.11
A1CF-204ENST00000373997 TMEM87AQ8NBN3 555 aa15.77■□□□□ 0.11
A1CF-204ENST00000373997 FOXD4L4Q8WXT5 416 aaPredicted RBP15.77■□□□□ 0.11
A1CF-204ENST00000373997 CELF1Q92879 486 aaKnown RBP15.77■□□□□ 0.11
A1CF-204ENST00000373997 TSPY26PQ9H489 355 aa15.77■□□□□ 0.11
A1CF-204ENST00000373997 TFCP2L1Q9NZI6 479 aa15.77■□□□□ 0.11
A1CF-204ENST00000373997 MCAMP43121 646 aa15.76■□□□□ 0.11
A1CF-204ENST00000373997 ZAP70P43403 619 aa15.76■□□□□ 0.11
A1CF-204ENST00000373997 SLFNL1Q499Z3 407 aa15.76■□□□□ 0.11
A1CF-204ENST00000373997 CHAMP1Q96JM3 812 aa15.76■□□□□ 0.11
A1CF-204ENST00000373997 UPF3BQ9BZI7 483 aaKnown RBP15.76■□□□□ 0.11
A1CF-204ENST00000373997 CCDC102BQ68D86 513 aa15.76■□□□□ 0.11
A1CF-204ENST00000373997 CCDC129Q6ZRS4 1044 aa15.76■□□□□ 0.11
A1CF-204ENST00000373997 SEC62Q99442 399 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms