RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MAGEB6P1A0A0J9YX57 407 aa13.07□□□□□ -0.32
VCL-202ENST00000372755 PLCG2P16885 1265 aa13.07□□□□□ -0.32
VCL-202ENST00000372755 CCDC50Q8IVM0 306 aa13.07□□□□□ -0.32
VCL-202ENST00000372755 NEK11Q8NG66 645 aa13.07□□□□□ -0.32
VCL-202ENST00000372755 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 KRT2P35908 639 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 MAP7D1Q3KQU3 841 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 ATRIPQ8WXE1 791 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 ADGRF5Q8IZF2 1346 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 ADGRL1O94910 1474 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 GJC1P36383 396 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 HS2ST1Q7LGA3 356 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 CCDC42Q96M95 316 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 F13A1P00488 732 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 ZBTB16Q05516 673 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 CCDC14Q49A88 953 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 DHX58Q96C10 678 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 NAP1L4Q99733 375 aaKnown RBP13.06□□□□□ -0.32
VCL-202ENST00000372755 CEP83Q9Y592 693 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 GPATCH11Q8N954 259 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
VCL-202ENST00000372755 SPTLC2O15270 562 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 PICALMQ13492 652 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 NOLC1Q14978 699 aaKnown RBP eCLIP13.06□□□□□ -0.32
VCL-202ENST00000372755 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 TIGD1Q96MW7 591 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 NYXQ9GZU5 481 aa13.06□□□□□ -0.32
VCL-202ENST00000372755 PDE1AP54750 535 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 PLCB3Q01970 1234 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 SLC9C2Q5TAH2 1124 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 KIAA0586Q9BVV6 1533 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 TMEM110-MUSTN1A8MSY1 372 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 PTGS1P23219 599 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
VCL-202ENST00000372755 TTC16Q8NEE8 873 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 XAGE3Q8WTP9 111 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 TXNDC16Q9P2K2 825 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 SLU7O95391 586 aaKnown RBP13.05□□□□□ -0.32
VCL-202ENST00000372755 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
VCL-202ENST00000372755 ALDH3A1P30838 453 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
VCL-202ENST00000372755 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
VCL-202ENST00000372755 SELENOSQ9BQE4 189 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 LRRC2Q9BYS8 371 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 MTRF1LQ9UGC7 380 aaKnown RBP13.05□□□□□ -0.32
VCL-202ENST00000372755 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 ATP8B2P98198 1209 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 CCDC121Q6ZUS5 278 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 JAKMIP2Q96AA8 810 aa13.05□□□□□ -0.32
VCL-202ENST00000372755 ACEP12821 1306 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 DACT1Q9NYF0 836 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 ABCC5O15440 1437 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 GRM8O00222 908 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 KIF14Q15058 1648 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 GNA11P29992 359 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 PSMC4P43686 418 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 PAG1Q9NWQ8 432 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 RSPH14Q9UHP6 348 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 TTC41PQ6P2S7 1318 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 NOS1P29475 1434 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 UBXN1Q04323 297 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 MCM6Q14566 821 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 ATP6V0A2Q9Y487 856 aa13.04□□□□□ -0.32
VCL-202ENST00000372755 F8W031 263 aaPredicted RBP13.03□□□□□ -0.32
VCL-202ENST00000372755 SNX16P57768 344 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 ARFGAP2Q8N6H7 521 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 FAM169AQ9Y6X4 670 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 RNF113AO15541 343 aaKnown RBP13.03□□□□□ -0.32
VCL-202ENST00000372755 IGHDP01880 384 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.03□□□□□ -0.32
VCL-202ENST00000372755 TSGA10Q9BZW7 698 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 ARID5AQ03989 594 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 C14orf93Q9H972 538 aaKnown RBP13.03□□□□□ -0.32
VCL-202ENST00000372755 TNNC1P63316 161 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 COPS6Q7L5N1 327 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 MTUS1Q9ULD2 1270 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 TUBBP07437 444 aa13.03□□□□□ -0.32
VCL-202ENST00000372755 TNNI2P48788 182 aa13.02□□□□□ -0.32
VCL-202ENST00000372755 BRAPQ7Z569 592 aa13.02□□□□□ -0.32
VCL-202ENST00000372755 ODF2LQ9ULJ1 636 aa13.02□□□□□ -0.32
VCL-202ENST00000372755 NOL3O60936 208 aaKnown RBP13.02□□□□□ -0.32
VCL-202ENST00000372755 ZWINTO95229 277 aa13.02□□□□□ -0.32
VCL-202ENST00000372755 NMIQ13287 307 aaPredicted RBP13.02□□□□□ -0.32
VCL-202ENST00000372755 CFAP58Q5T655 872 aa13.02□□□□□ -0.32
VCL-202ENST00000372755 RPL13P26373 211 aaKnown RBP13.02□□□□□ -0.33
VCL-202ENST00000372755 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms