RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SBF1O95248 1867 aa19.17■□□□□ 0.66
PRPF38B-202ENST00000370022 IRS2Q9Y4H2 1338 aa19.17■□□□□ 0.66
PRPF38B-202ENST00000370022 WTIPA6NIX2 430 aaPredicted RBP19.17■□□□□ 0.66
PRPF38B-202ENST00000370022 G3V3G9 751 aa19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 SNAP23O00161 211 aa19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 CAVIN4Q5BKX8 364 aa19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 DCAF8Q5TAQ9 597 aa19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 RHPN1Q8TCX5 695 aa19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 GCC1Q96CN9 775 aa19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 GPR101Q96P66 508 aaPredicted RBP19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
PRPF38B-202ENST00000370022 ZNF804AQ7Z570 1209 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 PODNQ7Z5L7 613 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 ZNRF3Q9ULT6 936 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 A0A1B0GUL7 405 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 KLRK1P26718 216 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 ERICH6BQ5W0A0 696 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 TXNRD3Q86VQ6 643 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 LRRCC1Q9C099 1032 aa19.15■□□□□ 0.66
PRPF38B-202ENST00000370022 DICER1Q9UPY3 1922 aaKnown RBP19.14■□□□□ 0.65
PRPF38B-202ENST00000370022 FZD9O00144 591 aa19.14■□□□□ 0.65
PRPF38B-202ENST00000370022 ECE2O60344 883 aa19.14■□□□□ 0.65
PRPF38B-202ENST00000370022 TNNI3KQ59H18 835 aa19.14■□□□□ 0.65
PRPF38B-202ENST00000370022 CLASRPQ8N2M8 674 aaKnown RBP19.14■□□□□ 0.65
PRPF38B-202ENST00000370022 FPGT-TNNI3KV9GXZ4 949 aa19.14■□□□□ 0.65
PRPF38B-202ENST00000370022 ZNF609O15014 1411 aa19.14■□□□□ 0.65
PRPF38B-202ENST00000370022 HIBADHP31937 336 aaKnown RBP19.13■□□□□ 0.65
PRPF38B-202ENST00000370022 VPS37DQ86XT2 251 aa19.13■□□□□ 0.65
PRPF38B-202ENST00000370022 FAM84BQ96KN1 310 aaPredicted RBP19.13■□□□□ 0.65
PRPF38B-202ENST00000370022 DBNDD1Q9H9R9 158 aa19.13■□□□□ 0.65
PRPF38B-202ENST00000370022 COL4A5P29400 1685 aa19.13■□□□□ 0.65
PRPF38B-202ENST00000370022 CHD4Q14839 1912 aa19.13■□□□□ 0.65
PRPF38B-202ENST00000370022 CCDC88AQ3V6T2 1871 aa19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 APBB1O00213 710 aa19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 EIF6P56537 245 aaKnown RBP19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 TIMM10P62072 90 aa19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 DOK7Q18PE1 504 aa19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 NEUROD6Q96NK8 337 aa19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 TIAM2Q8IVF5 1701 aa19.12■□□□□ 0.65
PRPF38B-202ENST00000370022 IL1R1P14778 569 aa19.11■□□□□ 0.65
PRPF38B-202ENST00000370022 GYG1P46976 350 aa19.11■□□□□ 0.65
PRPF38B-202ENST00000370022 FBXO33Q7Z6M2 555 aa19.11■□□□□ 0.65
PRPF38B-202ENST00000370022 CD209Q9NNX6 404 aa19.11■□□□□ 0.65
PRPF38B-202ENST00000370022 ZBTB22O15209 634 aa19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 IGHDP01880 384 aa19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 SMC5Q8IY18 1101 aa19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 XAGE2Q96GT9 111 aa19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 ARAP2Q8WZ64 1704 aa19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 DPY19L2Q6NUT2 758 aa19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 EAF2Q96CJ1 260 aaPredicted RBP19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 IL1RAPL2Q9NP60 686 aa19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 GNL3LQ9NVN8 582 aaKnown RBP19.1■□□□□ 0.65
PRPF38B-202ENST00000370022 YDJCA8MPS7 323 aa19.09■□□□□ 0.65
PRPF38B-202ENST00000370022 TNIP1Q15025 636 aa19.09■□□□□ 0.65
PRPF38B-202ENST00000370022 GORABQ5T7V8 394 aa19.09■□□□□ 0.65
PRPF38B-202ENST00000370022 AACSQ86V21 672 aa19.09■□□□□ 0.65
PRPF38B-202ENST00000370022 TDRD7Q8NHU6 1098 aaKnown RBP19.09■□□□□ 0.65
PRPF38B-202ENST00000370022 ZBTB47Q9UFB7 747 aaPredicted RBP19.09■□□□□ 0.65
PRPF38B-202ENST00000370022 ADORA1P30542 326 aa19.08■□□□□ 0.65
PRPF38B-202ENST00000370022 BCAMP50895 628 aa19.08■□□□□ 0.65
PRPF38B-202ENST00000370022 CCDC102BQ68D86 513 aa19.08■□□□□ 0.65
PRPF38B-202ENST00000370022 SEMA3EO15041 775 aa19.07■□□□□ 0.64
PRPF38B-202ENST00000370022 IFIT2P09913 472 aaKnown RBP19.07■□□□□ 0.64
PRPF38B-202ENST00000370022 CXCL9Q07325 125 aa19.07■□□□□ 0.64
PRPF38B-202ENST00000370022 CCDC158Q5M9N0 1113 aa19.07■□□□□ 0.64
PRPF38B-202ENST00000370022 CIAPIN1Q6FI81 312 aa19.07■□□□□ 0.64
PRPF38B-202ENST00000370022 GPC2Q8N158 579 aa19.07■□□□□ 0.64
PRPF38B-202ENST00000370022 DBNLQ9UJU6 430 aaKnown RBP19.07■□□□□ 0.64
PRPF38B-202ENST00000370022 USP17L3A6NCW0 530 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 USP17L4A6NCW7 530 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 GLTPD2A6NH11 291 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 STRIP1Q5VSL9 837 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 USP17L1Q7RTZ2 530 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 DBNDD2Q9BQY9 259 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 ZNF541Q9H0D2 1346 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 FRAT2O75474 233 aaPredicted RBP19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 UQCRFS1P1P0C7P4 283 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 ANKRD45Q5TZF3 282 aa19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 ZNF512BQ96KM6 892 aaPredicted RBP19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 CCDC8Q9H0W5 538 aaPredicted RBP19.06■□□□□ 0.64
PRPF38B-202ENST00000370022 RAD17O75943 681 aa19.05■□□□□ 0.64
PRPF38B-202ENST00000370022 PHKA1P46020 1223 aa19.05■□□□□ 0.64
PRPF38B-202ENST00000370022 TTLL5Q6EMB2 1281 aa19.05■□□□□ 0.64
PRPF38B-202ENST00000370022 FAM205AQ6ZU69 1335 aa19.05■□□□□ 0.64
PRPF38B-202ENST00000370022 KDM2BQ8NHM5 1336 aa19.05■□□□□ 0.64
PRPF38B-202ENST00000370022 SMARCA5O60264 1052 aaPredicted RBP19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 VIL1P09327 827 aaKnown RBP19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 ARID4AP29374 1257 aaPredicted RBP19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 KCNQ5Q9NR82 932 aa19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 TLR7Q9NYK1 1049 aaKnown RBP19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 DENND2AQ9ULE3 1009 aa19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 PDS5AQ29RF7 1337 aaKnown RBP19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 MYO3BQ8WXR4 1341 aa19.04■□□□□ 0.64
PRPF38B-202ENST00000370022 PSMD14O00487 310 aa19.03■□□□□ 0.64
PRPF38B-202ENST00000370022 RPS12P25398 132 aaKnown RBP19.03■□□□□ 0.64
PRPF38B-202ENST00000370022 FKBP1AP62942 108 aaKnown RBP19.03■□□□□ 0.64
PRPF38B-202ENST00000370022 GTF2IP78347 998 aa19.03■□□□□ 0.64
PRPF38B-202ENST00000370022 TTC39AQ5SRH9 613 aa19.03■□□□□ 0.64
PRPF38B-202ENST00000370022 NUCB1Q02818 461 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms