RNA–Protein interactions for RNA: ENST00000365211.1

RNU6-1280P-201, Transcript of RNA, U6 small nuclear 1280, pseudogene, humanhuman

BASIC

Gene RNU6-1280P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1280P-201ENST00000365211 DNAJA1P31689 397 aaKnown RBP4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 SIK1P57059 783 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 PAK2Q13177 524 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 NEUROD1Q13562 356 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 GRIN2CQ14957 1233 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 CCDC85BQ15834 202 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 DTHD1Q6ZMT9 781 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 NOP9Q86U38 636 aaKnown RBP4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 NCAPG2Q86XI2 1143 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 MCF2L2Q86YR7 1114 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 NXPE3Q969Y0 559 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 GPRASP2Q96D09 838 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 ZKSCAN3Q9BRR0 538 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 HIRIP3Q9BW71 556 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 PHF24Q9UPV7 400 aa4.23□□□□□ -1.73
RNU6-1280P-201ENST00000365211 SOBPA7XYQ1 873 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 ZBTB42B2RXF5 422 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 GREM1O60565 184 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 GTF2F1P35269 517 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 EIF4A3P38919 411 aaKnown RBP4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 GRIA4P48058 902 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 GPLD1P80108 840 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 FAM177A1Q8N128 213 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 PHC3Q8NDX5 983 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 DHX38Q92620 1227 aaKnown RBP4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 BHMTQ93088 406 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 ZNF837Q96EG3 531 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 ABHD17AQ96GS6 310 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 SPACA7Q96KW9 195 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 SPON2Q9BUD6 331 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 NT5C1AQ9BXI3 368 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 ADAMTS1Q9UHI8 967 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 DACH1Q9UI36 760 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 AKAP2Q9Y2D5 859 aa4.22□□□□□ -1.73
RNU6-1280P-201ENST00000365211 A0A096LPE4 126 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 A0A1W2PPZ6 126 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 PDE2AO00408 941 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 CD33P20138 364 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 GARTP22102 1010 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 FGFR3P22607 806 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 GBP2P32456 591 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 RPS26P62854 115 aaKnown RBP4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 COL9A2Q14055 689 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 KIAA0825Q8IV33 1275 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 NANOS1Q8WY41 292 aaKnown RBP4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 RHOVQ96L33 236 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 TRIM47Q96LD4 638 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 NECAB3Q96P71 396 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 PBX4Q9BYU1 374 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 LNPKQ9C0E8 428 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 AVENQ9NQS1 362 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SEC31BQ9NQW1 1179 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ROBO2Q9HCK4 1378 aa4.21□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ENC1O14682 589 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ST8SIA5O15466 376 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SIN3BO75182 1162 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ACPPP15309 386 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 LIG3P49916 1009 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 LMNB2Q03252 620 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SPRED3Q2MJR0 410 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 NBPF6Q5VWK0 638 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 FOXR1Q6PIV2 292 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 AGMOQ6ZNB7 445 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 CCDC84Q86UT8 332 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ZNF296Q8WUU4 475 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 GTPBP3Q969Y2 492 aaKnown RBP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 EAF1Q96JC9 268 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 NBPF4Q96M43 638 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 PUS7Q96PZ0 661 aaKnown RBP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 DNAJC2Q99543 621 aaKnown RBP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 TRIM56Q9BRZ2 755 aaKnown RBP4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ZNF576Q9H609 170 aa4.2□□□□□ -1.74
RNU6-1280P-201ENST00000365211 MINDY4BA8MYZ0 360 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 TRPA1O75762 1119 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 STK10O94804 968 aaKnown RBP4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SOX9P48436 509 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 CTBSQ01459 385 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 CCDC144BQ3MJ40 725 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ZNF468Q5VIY5 522 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 GIMAP6Q6P9H5 292 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 FBXL19Q6PCT2 694 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 TPTE2Q6XPS3 522 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SLITRK4Q8IW52 837 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 TNFRSF25Q93038 417 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 NSUN5Q96P11 429 aaKnown RBP4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 TRERF1Q96PN7 1200 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 HHIPQ96QV1 700 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 POP1Q99575 1024 aaKnown RBP4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 RASSF4Q9H2L5 321 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 STRIP2Q9ULQ0 834 aa4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SUPT16HQ9Y5B9 1047 aaKnown RBP4.19□□□□□ -1.74
RNU6-1280P-201ENST00000365211 ADARB2-AS1A8MUL3 147 aa4.18□□□□□ -1.74
RNU6-1280P-201ENST00000365211 METTL12A8MUP2 240 aa4.18□□□□□ -1.74
RNU6-1280P-201ENST00000365211 J3QW42 95 aa4.18□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SMARCA5O60264 1052 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1280P-201ENST00000365211 PPFIA3O75145 1194 aa4.18□□□□□ -1.74
RNU6-1280P-201ENST00000365211 FBXO24O75426 580 aa4.18□□□□□ -1.74
RNU6-1280P-201ENST00000365211 SMNDC1O75940 238 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNU6-1280P-201ENST00000365211 GHRHP01286 108 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms