RNA–Protein interactions for RNA: ENST00000357063.7

LMO7-203, Transcript of LIM domain 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LMO7, Length 8,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-203ENST00000357063 CAMSAP2Q08AD1 1489 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 ARL1P40616 181 aaPredicted RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 TUBB2AQ13885 445 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 CCDC38Q502W7 563 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 NECAB1Q8N987 351 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 TUBB2BQ9BVA1 445 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 ORC3Q9UBD5 711 aaPredicted RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 FGD5Q6ZNL6 1462 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 TLDC2A0PJX2 215 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 SDSP20132 328 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 MARCKSP29966 332 aaPredicted RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 RFC1P35251 1148 aaPredicted RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 RRS1Q15050 365 aaKnown RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 RRAGBQ5VZM2 374 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 DZIP1Q86YF9 867 aaKnown RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 CNGA4Q8IV77 575 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 RAB3IPQ96QF0 476 aaPredicted RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 RBM42Q9BTD8 480 aaKnown RBP8.55□□□□□ -1.04
LMO7-203ENST00000357063 LRRC27Q9C0I9 530 aa8.55□□□□□ -1.04
LMO7-203ENST00000357063 AKR1B15C9JRZ8 316 aaPredicted RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 ATP2A2P16615 1042 aaKnown RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 ATF3P18847 181 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 RBBP5Q15291 538 aaKnown RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 FYB2Q5VWT5 728 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 CCDC62Q6P9F0 684 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 TAOK1Q7L7X3 1001 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 PPP1R9BQ96SB3 815 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 SYNCQ9H7C4 482 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 NKIRAS1Q9NYS0 192 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 TNNC1P63316 161 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 TSHZ3Q63HK5 1081 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 IFT20Q8IY31 132 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 PSMA7O14818 248 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 IDEP14735 1019 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 PEX19P40855 299 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 MAP3K12Q12852 859 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 SF3B2Q13435 895 aaKnown RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 HDAC1Q13547 482 aaPredicted RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 TRIM68Q6AZZ1 485 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 GBP5Q96PP8 586 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 SPAG5Q96R06 1193 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 E7EVH7 732 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 RLBP1P12271 317 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 NCOA1Q15788 1441 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 TXNDC16Q9P2K2 825 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 IGHMBP2P38935 993 aaKnown RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 SPAG1Q07617 926 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 TMCO4Q5TGY1 634 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 NUF2Q9BZD4 464 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 CCDC8Q9H0W5 538 aaPredicted RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 ZNF131P52739 623 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 CCDC122Q5T0U0 273 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 MCUR1Q96AQ8 359 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 DDX27Q96GQ7 796 aaKnown RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 NAPGQ99747 312 aaPredicted RBP8.54□□□□□ -1.04
LMO7-203ENST00000357063 SSX2IPQ9Y2D8 614 aa8.54□□□□□ -1.04
LMO7-203ENST00000357063 RASSF2P50749 326 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 NEK11Q8NG66 645 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 CUL5Q93034 780 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 ADGBQ8N7X0 1667 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 GMNNO75496 209 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 SMC5Q8IY18 1101 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.53□□□□□ -1.047e-7■□□□□ 11.1
LMO7-203ENST00000357063 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 ERCC6LQ2NKX8 1250 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 MUM1Q2TAK8 710 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 ZNF444Q8N0Y2 327 aaPredicted RBP8.53□□□□□ -1.04
LMO7-203ENST00000357063 SH3BGRP55822 239 aaPredicted RBP8.53□□□□□ -1.04
LMO7-203ENST00000357063 TTF1Q15361 905 aaPredicted RBP8.53□□□□□ -1.04
LMO7-203ENST00000357063 ZNF530Q6P9A1 599 aaPredicted RBP8.53□□□□□ -1.04
LMO7-203ENST00000357063 VPS52Q8N1B4 723 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 NCOA7Q8NI08 942 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 LRRC45Q96CN5 670 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 ZNF692Q9BU19 519 aaPredicted RBP8.53□□□□□ -1.04
LMO7-203ENST00000357063 TPX2Q9ULW0 747 aaKnown RBP8.53□□□□□ -1.04
LMO7-203ENST00000357063 MAP7Q14244 749 aa8.53□□□□□ -1.04
LMO7-203ENST00000357063 CCDC85AQ96PX6 553 aaPredicted RBP8.53□□□□□ -1.04
LMO7-203ENST00000357063 BICDL2A1A5D9 508 aa8.52□□□□□ -1.04
LMO7-203ENST00000357063 PABPN1LA6NDY0 278 aaKnown RBP8.52□□□□□ -1.04
LMO7-203ENST00000357063 MFSD6Q6ZSS7 791 aa8.52□□□□□ -1.04
LMO7-203ENST00000357063 RBSNQ9H1K0 784 aa8.52□□□□□ -1.04
LMO7-203ENST00000357063 RABEP2Q9H5N1 569 aa8.52□□□□□ -1.04
LMO7-203ENST00000357063 CABP1Q9NZU7 370 aa8.52□□□□□ -1.04
LMO7-203ENST00000357063 STK38LQ9Y2H1 464 aa8.52□□□□□ -1.04
LMO7-203ENST00000357063 CAPN7Q9Y6W3 813 aa8.52□□□□□ -1.04
LMO7-203ENST00000357063 CAVIN4Q5BKX8 364 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 PLCB1Q9NQ66 1216 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 FANCD2Q9BXW9 1451 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 CETN3O15182 167 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 WDHD1O75717 1129 aaPredicted RBP8.52□□□□□ -1.05
LMO7-203ENST00000357063 PPFIA1Q13136 1202 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 MCM10Q7L590 875 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 PNMA8AQ86V59 439 aaPredicted RBP8.52□□□□□ -1.05
LMO7-203ENST00000357063 ARHGAP24Q8N264 748 aa8.52□□□□□ -1.05
LMO7-203ENST00000357063 GPR161Q8N6U8 529 aaKnown RBP8.52□□□□□ -1.05
LMO7-203ENST00000357063 GSDMBQ8TAX9 411 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms