RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 NEURL1BA8MQ27 555 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 KRT32Q14532 448 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 MCMDC2Q4G0Z9 681 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 STK11IPQ8N1F8 1099 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 DNAI1Q9UI46 699 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 TOPAZ1Q8N9V7 1692 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 PXDNQ92626 1479 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 HOXB7P09629 217 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 PDIA6Q15084 440 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 DDX58O95786 925 aaKnown RBP11.82□□□□□ -0.52
PTPRA-203ENST00000356147 GCKRQ14397 625 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 STK38Q15208 465 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 ARHGAP29Q52LW3 1261 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 USPL1Q5W0Q7 1092 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 PFKFB2O60825 505 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
PTPRA-203ENST00000356147 MARCKSP29966 332 aaPredicted RBP11.82□□□□□ -0.52
PTPRA-203ENST00000356147 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
PTPRA-203ENST00000356147 NEXNQ0ZGT2 675 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 DHX32Q7L7V1 743 aaKnown RBP11.82□□□□□ -0.52
PTPRA-203ENST00000356147 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
PTPRA-203ENST00000356147 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
PTPRA-203ENST00000356147 SFPQP23246 707 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRA-203ENST00000356147 CLCN6P51797 869 aa11.81□□□□□ -0.52
PTPRA-203ENST00000356147 MRPS27Q92552 414 aaKnown RBP11.81□□□□□ -0.52
PTPRA-203ENST00000356147 CTAGE5O15320 804 aa11.81□□□□□ -0.52
PTPRA-203ENST00000356147 ATP5JP18859 108 aa11.81□□□□□ -0.52
PTPRA-203ENST00000356147 PSME1Q06323 249 aa11.81□□□□□ -0.52
PTPRA-203ENST00000356147 TSGA10IPQ3SY00 556 aa11.81□□□□□ -0.52
PTPRA-203ENST00000356147 ESCO1Q5FWF5 840 aa11.81□□□□□ -0.52
PTPRA-203ENST00000356147 FMR1NBQ8N0W7 255 aaPredicted RBP11.81□□□□□ -0.52
PTPRA-203ENST00000356147 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRA-203ENST00000356147 E7EWF7 191 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 NEMFO60524 1076 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
PTPRA-203ENST00000356147 PDIA3P30101 505 aaKnown RBP11.8□□□□□ -0.52
PTPRA-203ENST00000356147 DPF2Q92785 391 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 ZNF396Q96N95 335 aaPredicted RBP11.8□□□□□ -0.52
PTPRA-203ENST00000356147 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
PTPRA-203ENST00000356147 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
PTPRA-203ENST00000356147 PLEKHG1Q9ULL1 1385 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 URI1O94763 535 aaPredicted RBP11.8□□□□□ -0.52
PTPRA-203ENST00000356147 RXRAP19793 462 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
PTPRA-203ENST00000356147 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
PTPRA-203ENST00000356147 A0A087WZG4 1122 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 FANCGO15287 622 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 CAVIN2O95810 425 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 NAA16Q6N069 864 aaPredicted RBP11.79□□□□□ -0.52
PTPRA-203ENST00000356147 LMBR1LQ6UX01 489 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
PTPRA-203ENST00000356147 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 CCDC85AQ96PX6 553 aaPredicted RBP11.79□□□□□ -0.52
PTPRA-203ENST00000356147 NAT10Q9H0A0 1025 aaKnown RBP11.79□□□□□ -0.52
PTPRA-203ENST00000356147 ADGRL3Q9HAR2 1447 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 GTF2E1P29083 439 aaPredicted RBP11.79□□□□□ -0.52
PTPRA-203ENST00000356147 TMEM51Q9NW97 253 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
PTPRA-203ENST00000356147 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 SLC3A2P08195 630 aaKnown RBP11.78□□□□□ -0.52
PTPRA-203ENST00000356147 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
PTPRA-203ENST00000356147 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
PTPRA-203ENST00000356147 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 TMEM232C9JQI7 657 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 HSPD1P10809 573 aaKnown RBP11.78□□□□□ -0.52
PTPRA-203ENST00000356147 RFX5P48382 616 aaPredicted RBP11.78□□□□□ -0.52
PTPRA-203ENST00000356147 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
PTPRA-203ENST00000356147 CARD6Q9BX69 1037 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.526e-7■■■□□ 15.6
PTPRA-203ENST00000356147 FHOD1Q9Y613 1164 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 AGLP35573 1532 aa11.78□□□□□ -0.52
PTPRA-203ENST00000356147 N4BP2Q86UW6 1770 aaPredicted RBP11.78□□□□□ -0.52
PTPRA-203ENST00000356147 KIF28PB7ZC32 967 aa11.77□□□□□ -0.52
PTPRA-203ENST00000356147 ZNF202O95125 648 aa11.77□□□□□ -0.52
PTPRA-203ENST00000356147 FKBP4Q02790 459 aaKnown RBP eCLIP11.77□□□□□ -0.52
PTPRA-203ENST00000356147 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.52
PTPRA-203ENST00000356147 KBTBD3Q8NAB2 608 aa11.77□□□□□ -0.52
PTPRA-203ENST00000356147 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.52
PTPRA-203ENST00000356147 HAUS7Q99871 368 aa11.77□□□□□ -0.52
PTPRA-203ENST00000356147 DENND2AQ9ULE3 1009 aa11.77□□□□□ -0.52
PTPRA-203ENST00000356147 PNMA6AP0CW24 399 aaPredicted RBP11.77□□□□□ -0.53
PTPRA-203ENST00000356147 PLA2G4AP47712 749 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 GYS2P54840 703 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 GSDMDP57764 484 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
PTPRA-203ENST00000356147 FANCCQ00597 558 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
PTPRA-203ENST00000356147 C8orf76Q96K31 380 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 SERPINC1P01008 464 aa11.77□□□□□ -0.53
PTPRA-203ENST00000356147 ZC3H6P61129 1189 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms