RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 AK2P54819 239 aa30.78■■■□□ 2.52
CLK2-201ENST00000355560 CUL4AQ13619 759 aa30.78■■■□□ 2.52
CLK2-201ENST00000355560 TNPO1Q92973 898 aaKnown RBP30.78■■■□□ 2.52
CLK2-201ENST00000355560 RPAP1Q9BWH6 1393 aaPredicted RBP30.78■■■□□ 2.52
CLK2-201ENST00000355560 CYP46A1Q9Y6A2 500 aa30.77■■■□□ 2.52
CLK2-201ENST00000355560 MAST3O60307 1309 aa30.77■■■□□ 2.52
CLK2-201ENST00000355560 SNAP23O00161 211 aa30.77■■■□□ 2.52
CLK2-201ENST00000355560 ARID4AP29374 1257 aaPredicted RBP30.77■■■□□ 2.52
CLK2-201ENST00000355560 MYH7P12883 1935 aa30.77■■■□□ 2.52
CLK2-201ENST00000355560 TAF1P21675 1872 aa30.76■■■□□ 2.52
CLK2-201ENST00000355560 CHRNDQ07001 517 aa30.76■■■□□ 2.52
CLK2-201ENST00000355560 ANKRD18AQ8IVF6 992 aa30.76■■■□□ 2.52
CLK2-201ENST00000355560 U3KPZ7 1027 aaPredicted RBP30.76■■■□□ 2.52
CLK2-201ENST00000355560 ZFYP08048 801 aaPredicted RBP30.76■■■□□ 2.51
CLK2-201ENST00000355560 TPTE2Q6XPS3 522 aa30.76■■■□□ 2.51
CLK2-201ENST00000355560 RUFY3Q7L099 469 aa30.76■■■□□ 2.51
CLK2-201ENST00000355560 UBR3Q6ZT12 1888 aa30.76■■■□□ 2.51
CLK2-201ENST00000355560 UQCRFS1P1P0C7P4 283 aa30.75■■■□□ 2.51
CLK2-201ENST00000355560 PSMA5P28066 241 aa30.75■■■□□ 2.51
CLK2-201ENST00000355560 TAF6LQ9Y6J9 622 aa30.75■■■□□ 2.51
CLK2-201ENST00000355560 MCM4P33991 863 aa30.74■■■□□ 2.51
CLK2-201ENST00000355560 SLC27A3Q5K4L6 730 aa30.74■■■□□ 2.51
CLK2-201ENST00000355560 VPS53Q5VIR6 699 aa30.74■■■□□ 2.51
CLK2-201ENST00000355560 ZNF772Q68DY9 489 aaPredicted RBP30.74■■■□□ 2.51
CLK2-201ENST00000355560 PDRG1Q9NUG6 133 aa30.74■■■□□ 2.51
CLK2-201ENST00000355560 ADRA2BP18089 450 aa30.74■■■□□ 2.51
CLK2-201ENST00000355560 RBM6P78332 1123 aaKnown RBP30.73■■■□□ 2.51
CLK2-201ENST00000355560 TSGA10IPQ3SY00 556 aa30.73■■■□□ 2.51
CLK2-201ENST00000355560 OSBP2Q969R2 916 aa30.73■■■□□ 2.51
CLK2-201ENST00000355560 INTS4Q96HW7 963 aaKnown RBP30.73■■■□□ 2.51
CLK2-201ENST00000355560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.73■■■□□ 2.51
CLK2-201ENST00000355560 M0R2C6 588 aa30.73■■■□□ 2.51
CLK2-201ENST00000355560 NLRP3Q96P20 1036 aa30.73■■■□□ 2.51
CLK2-201ENST00000355560 DSCC1Q9BVC3 393 aa30.73■■■□□ 2.51
CLK2-201ENST00000355560 A0A1B0GUL6 1792 aa30.72■■■□□ 2.51
CLK2-201ENST00000355560 CYP2E1P05181 493 aaPredicted RBP30.72■■■□□ 2.51
CLK2-201ENST00000355560 NUCB2P80303 420 aa30.72■■■□□ 2.51
CLK2-201ENST00000355560 TTF1Q15361 905 aaPredicted RBP30.72■■■□□ 2.51
CLK2-201ENST00000355560 WASHC4Q2M389 1173 aa30.72■■■□□ 2.51
CLK2-201ENST00000355560 CCDC24Q8N4L8 307 aa30.71■■■□□ 2.51
CLK2-201ENST00000355560 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.71■■■□□ 2.519e-7■■■□□ 18.7
CLK2-201ENST00000355560 LIMCH1Q9UPQ0 1083 aa30.71■■■□□ 2.51
CLK2-201ENST00000355560 BSDC1Q9NW68 430 aaPredicted RBP30.71■■■□□ 2.51
CLK2-201ENST00000355560 CARMIL3Q8ND23 1372 aa30.71■■■□□ 2.51
CLK2-201ENST00000355560 LARP6Q9BRS8 491 aaKnown RBP30.7■■■□□ 2.51
CLK2-201ENST00000355560 NPHP1O15259 732 aa30.7■■■□□ 2.5
CLK2-201ENST00000355560 HSPD1P10809 573 aaKnown RBP30.7■■■□□ 2.5
CLK2-201ENST00000355560 BLOC1S2Q6QNY1 142 aa30.7■■■□□ 2.5
CLK2-201ENST00000355560 APPBP2Q92624 585 aa30.7■■■□□ 2.5
CLK2-201ENST00000355560 CELF1Q92879 486 aaKnown RBP30.7■■■□□ 2.5
CLK2-201ENST00000355560 CYP21A2P08686 494 aa30.69■■■□□ 2.5
CLK2-201ENST00000355560 PKP1Q13835 747 aa30.69■■■□□ 2.5
CLK2-201ENST00000355560 KRT32Q14532 448 aa30.69■■■□□ 2.5
CLK2-201ENST00000355560 MYO5AQ9Y4I1 1855 aaKnown RBP30.69■■■□□ 2.5
CLK2-201ENST00000355560 COL9A3Q14050 684 aaPredicted RBP30.68■■■□□ 2.5
CLK2-201ENST00000355560 NFIXQ14938 502 aa30.68■■■□□ 2.5
CLK2-201ENST00000355560 GBP4Q96PP9 640 aa30.68■■■□□ 2.5
CLK2-201ENST00000355560 PIH1D3Q9NQM4 214 aaKnown RBP30.68■■■□□ 2.5
CLK2-201ENST00000355560 RASGRF1Q13972 1273 aa30.68■■■□□ 2.5
CLK2-201ENST00000355560 SPATA5Q8NB90 893 aa30.68■■■□□ 2.5
CLK2-201ENST00000355560 ZSCAN25Q6NSZ9 544 aa30.67■■■□□ 2.5
CLK2-201ENST00000355560 IDH1O75874 414 aaKnown RBP30.67■■■□□ 2.5
CLK2-201ENST00000355560 TNRC6CQ9HCJ0 1690 aaKnown RBP30.66■■■□□ 2.5
CLK2-201ENST00000355560 PUS7LQ9H0K6 701 aaKnown RBP30.66■■■□□ 2.5
CLK2-201ENST00000355560 RPS6KB1P23443 525 aa30.65■■■□□ 2.5
CLK2-201ENST00000355560 ADD2P35612 726 aa30.65■■■□□ 2.5
CLK2-201ENST00000355560 BCAMP50895 628 aa30.65■■■□□ 2.5
CLK2-201ENST00000355560 SLC9C2Q5TAH2 1124 aa30.65■■■□□ 2.5
CLK2-201ENST00000355560 MINPP1Q9UNW1 487 aa30.65■■■□□ 2.5
CLK2-201ENST00000355560 DDX11L8A8MPP1 907 aa30.64■■■□□ 2.5
CLK2-201ENST00000355560 TXNRD1Q16881 649 aa30.64■■■□□ 2.49
CLK2-201ENST00000355560 TCEANC2Q96MN5 208 aa30.64■■■□□ 2.49
CLK2-201ENST00000355560 LARGE1O95461 756 aa30.63■■■□□ 2.49
CLK2-201ENST00000355560 RPS8P62241 208 aaKnown RBP30.63■■■□□ 2.49
CLK2-201ENST00000355560 CNBD1Q8NA66 436 aa30.63■■■□□ 2.49
CLK2-201ENST00000355560 NEK1Q96PY6 1258 aa30.63■■■□□ 2.49
CLK2-201ENST00000355560 DOCK2Q92608 1830 aa30.63■■■□□ 2.49
CLK2-201ENST00000355560 GYS1P13807 737 aa30.62■■■□□ 2.49
CLK2-201ENST00000355560 UBE4AQ14139 1066 aa30.62■■■□□ 2.49
CLK2-201ENST00000355560 GPAA1O43292 621 aa30.61■■■□□ 2.49
CLK2-201ENST00000355560 UBE3CQ15386 1083 aa30.61■■■□□ 2.49
CLK2-201ENST00000355560 PROM2Q8N271 834 aa30.61■■■□□ 2.49
CLK2-201ENST00000355560 ZSCAN31Q96LW9 406 aaPredicted RBP30.61■■■□□ 2.49
CLK2-201ENST00000355560 SH2B1Q9NRF2 756 aaPredicted RBP30.61■■■□□ 2.49
CLK2-201ENST00000355560 WWC3Q9ULE0 1092 aa30.61■■■□□ 2.49
CLK2-201ENST00000355560 PDE6AP16499 860 aa30.6■■■□□ 2.49
CLK2-201ENST00000355560 CLEC17AQ6ZS10 378 aa30.6■■■□□ 2.49
CLK2-201ENST00000355560 ZNF532Q9HCE3 1301 aa30.59■■■□□ 2.49
CLK2-201ENST00000355560 FOXP2O15409 715 aa30.59■■■□□ 2.49
CLK2-201ENST00000355560 ANKRD1Q15327 319 aa30.59■■■□□ 2.49
CLK2-201ENST00000355560 STOX1Q6ZVD7 989 aa30.59■■■□□ 2.49
CLK2-201ENST00000355560 ZDHHC9Q9Y397 364 aa30.59■■■□□ 2.49
CLK2-201ENST00000355560 ALDH8A1Q9H2A2 487 aaPredicted RBP30.59■■■□□ 2.49
CLK2-201ENST00000355560 TPCN1Q9ULQ1 816 aa30.59■■■□□ 2.49
CLK2-201ENST00000355560 WTIPA6NIX2 430 aaPredicted RBP30.58■■■□□ 2.49
CLK2-201ENST00000355560 TM4SF1P30408 202 aa30.58■■■□□ 2.49
CLK2-201ENST00000355560 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.58■■■□□ 2.49
CLK2-201ENST00000355560 LAMA4Q16363 1823 aa30.58■■■□□ 2.49
CLK2-201ENST00000355560 ZNF804BA4D1E1 1349 aa30.58■■■□□ 2.49
CLK2-201ENST00000355560 A0A0G2JLW4 131 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms