RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 WASHC4Q2M389 1173 aa18.51■□□□□ 0.55
MBD1-205ENST00000353909 FERMT3Q86UX7 667 aa18.51■□□□□ 0.55
MBD1-205ENST00000353909 ALDH8A1Q9H2A2 487 aaPredicted RBP18.51■□□□□ 0.55
MBD1-205ENST00000353909 ANKRD1Q15327 319 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 FAM173BQ6P4H8 233 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 CHST3Q7LGC8 479 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 BRF1Q92994 677 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 DSCC1Q9BVC3 393 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 PUS7LQ9H0K6 701 aaKnown RBP18.5■□□□□ 0.55
MBD1-205ENST00000353909 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 FIBPO43427 364 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 JAK2O60674 1132 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 CAMTA2O94983 1202 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 DNM1Q05193 864 aaKnown RBP18.5■□□□□ 0.55
MBD1-205ENST00000353909 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
MBD1-205ENST00000353909 CDC37L1Q7L3B6 337 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 LAMA4Q16363 1823 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 PDE8BO95263 885 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 RBSNQ9H1K0 784 aa18.5■□□□□ 0.55
MBD1-205ENST00000353909 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
MBD1-205ENST00000353909 MBD3O95983 291 aa18.49■□□□□ 0.55
MBD1-205ENST00000353909 PHKA1P46020 1223 aa18.49■□□□□ 0.55
MBD1-205ENST00000353909 MYO5AQ9Y4I1 1855 aaKnown RBP18.48■□□□□ 0.55
MBD1-205ENST00000353909 HAND2P61296 217 aa18.48■□□□□ 0.55
MBD1-205ENST00000353909 E7EWF7 191 aa18.48■□□□□ 0.55
MBD1-205ENST00000353909 BARGINQ6ZT62 677 aa18.48■□□□□ 0.55
MBD1-205ENST00000353909 C8orf37Q96NL8 207 aa18.48■□□□□ 0.55
MBD1-205ENST00000353909 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
MBD1-205ENST00000353909 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
MBD1-205ENST00000353909 NASPP49321 788 aaPredicted RBP18.47■□□□□ 0.55
MBD1-205ENST00000353909 SPEF2Q9C093 1822 aa18.47■□□□□ 0.55
MBD1-205ENST00000353909 HSP90B1P14625 803 aaKnown RBP18.47■□□□□ 0.55
MBD1-205ENST00000353909 GTF3C6Q969F1 213 aa18.47■□□□□ 0.55
MBD1-205ENST00000353909 NIP7Q9Y221 180 aaKnown RBP eCLIP18.47■□□□□ 0.55
MBD1-205ENST00000353909 DHX32Q7L7V1 743 aaKnown RBP18.46■□□□□ 0.55
MBD1-205ENST00000353909 TOM1O60784 492 aa18.46■□□□□ 0.55
MBD1-205ENST00000353909 FGD1P98174 961 aa18.46■□□□□ 0.55
MBD1-205ENST00000353909 CCDC102BQ68D86 513 aa18.46■□□□□ 0.55
MBD1-205ENST00000353909 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
MBD1-205ENST00000353909 PIH1D3Q9NQM4 214 aaKnown RBP18.46■□□□□ 0.55
MBD1-205ENST00000353909 APOBRQ0VD83 1088 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 SCRN1Q12765 414 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 TMEM87AQ8NBN3 555 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 DDX11Q96FC9 970 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 GPHNQ9NQX3 736 aaPredicted RBP18.45■□□□□ 0.54
MBD1-205ENST00000353909 EP400Q96L91 3159 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 FGAP02671 866 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 EXOSC10Q01780 885 aaKnown RBP18.45■□□□□ 0.54
MBD1-205ENST00000353909 RRAGDQ9NQL2 400 aaPredicted RBP18.45■□□□□ 0.54
MBD1-205ENST00000353909 FAM182BQ5T319 152 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
MBD1-205ENST00000353909 NWD2Q9ULI1 1742 aa18.44■□□□□ 0.54
MBD1-205ENST00000353909 LRSAM1Q6UWE0 723 aa18.44■□□□□ 0.54
MBD1-205ENST00000353909 APPBP2Q92624 585 aa18.44■□□□□ 0.54
MBD1-205ENST00000353909 GPAA1O43292 621 aa18.44■□□□□ 0.54
MBD1-205ENST00000353909 IDH1O75874 414 aaKnown RBP18.44■□□□□ 0.54
MBD1-205ENST00000353909 NTSR2O95665 410 aa18.44■□□□□ 0.54
MBD1-205ENST00000353909 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
MBD1-205ENST00000353909 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
MBD1-205ENST00000353909 FGFR2P21802 821 aa18.43■□□□□ 0.54
MBD1-205ENST00000353909 NCOA5Q9HCD5 579 aaKnown RBP18.43■□□□□ 0.54
MBD1-205ENST00000353909 COL4A1P02462 1669 aa18.43■□□□□ 0.54
MBD1-205ENST00000353909 ZFYP08048 801 aaPredicted RBP18.43■□□□□ 0.54
MBD1-205ENST00000353909 CCT2P78371 535 aaKnown RBP18.43■□□□□ 0.54
MBD1-205ENST00000353909 TICAM2Q86XR7 235 aa18.43■□□□□ 0.54
MBD1-205ENST00000353909 ATP6V1DQ9Y5K8 247 aa18.43■□□□□ 0.54
MBD1-205ENST00000353909 RNF214Q8ND24 703 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 MYH7P12883 1935 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 BCL9LQ86UU0 1499 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 UBAP1LF5GYI3 381 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 PUM3Q15397 648 aaKnown RBP18.42■□□□□ 0.54
MBD1-205ENST00000353909 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 MPHOSPH8Q99549 860 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 DENND2AQ9ULE3 1009 aa18.42■□□□□ 0.54
MBD1-205ENST00000353909 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
MBD1-205ENST00000353909 CTDNEP1O95476 244 aa18.41■□□□□ 0.54
MBD1-205ENST00000353909 ADD2P35612 726 aa18.41■□□□□ 0.54
MBD1-205ENST00000353909 NAP1L2Q9ULW6 460 aaPredicted RBP18.41■□□□□ 0.54
MBD1-205ENST00000353909 HMGB1P09429 215 aaKnown RBP18.41■□□□□ 0.54
MBD1-205ENST00000353909 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
MBD1-205ENST00000353909 LPIN2Q92539 896 aa18.41■□□□□ 0.54
MBD1-205ENST00000353909 DDX60Q8IY21 1712 aaKnown RBP18.41■□□□□ 0.54
MBD1-205ENST00000353909 FOSBP53539 338 aa18.41■□□□□ 0.54
MBD1-205ENST00000353909 FAM43AQ8N2R8 423 aa18.41■□□□□ 0.54
MBD1-205ENST00000353909 AGXT2Q9BYV1 514 aa18.41■□□□□ 0.54
MBD1-205ENST00000353909 TFIP11Q9UBB9 837 aaKnown RBP18.41■□□□□ 0.54
MBD1-205ENST00000353909 MROH5Q6ZUA9 1318 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 PDCP20941 246 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 UBE2HP62256 183 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 RASGRF1Q13972 1273 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 ZNF512BQ96KM6 892 aaPredicted RBP18.4■□□□□ 0.54
MBD1-205ENST00000353909 ABCC12Q96J65 1359 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 ZNF532Q9HCE3 1301 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 LRP5O75197 1615 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 PFKFB2O60825 505 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
MBD1-205ENST00000353909 LRRFIP1Q32MZ4 808 aaKnown RBP18.4■□□□□ 0.54
MBD1-205ENST00000353909 PARP10Q53GL7 1025 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms