RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 NMIQ13287 307 aaPredicted RBP17.59■□□□□ 0.41
PTBP1-201ENST00000349038 KCNB2Q92953 911 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 DEF6Q9H4E7 631 aa17.59■□□□□ 0.41
PTBP1-201ENST00000349038 ICE2Q659A1 982 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 USP28Q96RU2 1077 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 LZTFL1Q9NQ48 299 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 H3BQF6 201 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 TBC1D8O95759 1140 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 TEFQ10587 303 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 SRLQ86TD4 932 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 DHX40Q8IX18 779 aaKnown RBP17.58■□□□□ 0.4
PTBP1-201ENST00000349038 FAM212AQ96EL1 285 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 MRFAP1L1Q96HT8 127 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 PARD6BQ9BYG5 372 aa17.58■□□□□ 0.4
PTBP1-201ENST00000349038 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
PTBP1-201ENST00000349038 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
PTBP1-201ENST00000349038 TM6SF1Q9BZW5 370 aa17.57■□□□□ 0.4
PTBP1-201ENST00000349038 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
PTBP1-201ENST00000349038 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
PTBP1-201ENST00000349038 NUTM2GQ5VZR2 741 aa17.57■□□□□ 0.4
PTBP1-201ENST00000349038 CCDC129Q6ZRS4 1044 aa17.57■□□□□ 0.4
PTBP1-201ENST00000349038 PACS2Q86VP3 889 aa17.57■□□□□ 0.4
PTBP1-201ENST00000349038 CCDC12Q8WUD4 166 aaPredicted RBP17.57■□□□□ 0.4
PTBP1-201ENST00000349038 PTPRUQ92729 1446 aa17.57■□□□□ 0.4
PTBP1-201ENST00000349038 NOM1Q5C9Z4 860 aaKnown RBP17.56■□□□□ 0.4
PTBP1-201ENST00000349038 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
PTBP1-201ENST00000349038 CC2D1AQ6P1N0 951 aaPredicted RBP17.56■□□□□ 0.4
PTBP1-201ENST00000349038 NAT10Q9H0A0 1025 aaKnown RBP17.56■□□□□ 0.4
PTBP1-201ENST00000349038 PPP2R3AQ06190 1150 aa17.56■□□□□ 0.4
PTBP1-201ENST00000349038 SLC20A2Q08357 652 aa17.56■□□□□ 0.4
PTBP1-201ENST00000349038 KLHDC4Q8TBB5 520 aa17.56■□□□□ 0.4
PTBP1-201ENST00000349038 WDR24Q96S15 920 aa17.56■□□□□ 0.4
PTBP1-201ENST00000349038 FAN1Q9Y2M0 1017 aa17.56■□□□□ 0.4
PTBP1-201ENST00000349038 TTC41PQ6P2S7 1318 aa17.56■□□□□ 0.4
PTBP1-201ENST00000349038 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
PTBP1-201ENST00000349038 GSDMDP57764 484 aa17.55■□□□□ 0.4
PTBP1-201ENST00000349038 KIF2AO00139 706 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-201ENST00000349038 NOP2P46087 812 aaKnown RBP17.55■□□□□ 0.4
PTBP1-201ENST00000349038 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
PTBP1-201ENST00000349038 NBPF11Q86T75 865 aa17.55■□□□□ 0.4
PTBP1-201ENST00000349038 GJB4Q9NTQ9 266 aa17.55■□□□□ 0.4
PTBP1-201ENST00000349038 CFAP45Q9UL16 551 aa17.55■□□□□ 0.4
PTBP1-201ENST00000349038 SLC27A2O14975 620 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 MARCKSP29966 332 aaPredicted RBP17.54■□□□□ 0.4
PTBP1-201ENST00000349038 CEBPAP49715 358 aaPredicted RBP17.54■□□□□ 0.4
PTBP1-201ENST00000349038 ADKP55263 362 aaKnown RBP17.54■□□□□ 0.4
PTBP1-201ENST00000349038 HDGFL1Q5TGJ6 251 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 GLRX3O76003 335 aaKnown RBP17.54■□□□□ 0.4
PTBP1-201ENST00000349038 AMPHP49418 695 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 Q6ZUG5 572 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 MNAT1P51948 309 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 UBASH3AP57075 661 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 STK38Q15208 465 aa17.54■□□□□ 0.4
PTBP1-201ENST00000349038 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
PTBP1-201ENST00000349038 A0A0D9SFI3 127 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 PSMA5P28066 241 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 LONRF2Q1L5Z9 754 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 HSP90B2PQ58FF3 399 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 DPF2Q92785 391 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 A0A1B0GUL7 405 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 HSP90AB4PQ58FF6 505 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 FBXO18Q8NFZ0 1043 aa17.53■□□□□ 0.4
PTBP1-201ENST00000349038 ACTN2P35609 894 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 AIMP1Q12904 312 aaKnown RBP17.52■□□□□ 0.4
PTBP1-201ENST00000349038 REXO1L1PQ8IX06 675 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 EFCC1Q9HA90 598 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 ELP1O95163 1332 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 EIF3CLB5ME19 914 aaKnown RBP17.52■□□□□ 0.4
PTBP1-201ENST00000349038 ZRANB2O95218 330 aaKnown RBP eCLIP17.52■□□□□ 0.45e-7■■■■□ 22.3
PTBP1-201ENST00000349038 LIG3P49916 1009 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 BEND3Q5T5X7 828 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 C14orf37Q86TY3 774 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 DHX58Q96C10 678 aa17.52■□□□□ 0.4
PTBP1-201ENST00000349038 EIF3CQ99613 913 aaKnown RBP17.52■□□□□ 0.4
PTBP1-201ENST00000349038 FANCGO15287 622 aa17.52■□□□□ 0.39
PTBP1-201ENST00000349038 TADA3O75528 432 aa17.52■□□□□ 0.39
PTBP1-201ENST00000349038 TOP1P11387 765 aaKnown RBP17.52■□□□□ 0.39
PTBP1-201ENST00000349038 NECTIN1Q15223 517 aa17.52■□□□□ 0.39
PTBP1-201ENST00000349038 BICC1Q9H694 974 aaKnown RBP17.52■□□□□ 0.39
PTBP1-201ENST00000349038 APOBRQ0VD83 1088 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 DNAJC21Q5F1R6 531 aaKnown RBP17.51■□□□□ 0.39
PTBP1-201ENST00000349038 TTC19Q6DKK2 380 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-201ENST00000349038 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-201ENST00000349038 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 PIK3C2AO00443 1686 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 PI4KAP2A4QPH2 592 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 NDUFA8P51970 172 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 PI4KAP1Q8N8J0 262 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 L2HGDHQ9H9P8 463 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 FAM53CQ9NYF3 392 aa17.51■□□□□ 0.39
PTBP1-201ENST00000349038 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
PTBP1-201ENST00000349038 FANCCQ00597 558 aa17.5■□□□□ 0.39
PTBP1-201ENST00000349038 TEX2Q8IWB9 1127 aa17.5■□□□□ 0.39
PTBP1-201ENST00000349038 LONRF3Q496Y0 759 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms